Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_40098 Sequoiadendron giganteum HOM05D005480 ORTHO05D006735 8.5e-149 530.8 373 100.0
Actinidia12077 Actinidia chinensis HOM05D005480 ORTHO05D006735 1.6e-67 260.8 212 65.6
ATR0733G143 Amborella trichopoda HOM05D005480 ORTHO05D006735 1.6e-67 260.8 285 50.9
Cfa004218 Carpinus fangiana HOM05D005480 ORTHO05D006735 1.6e-67 260.8 347 53.6
Peaxi162Scf00993g00022 Petunia axillaris HOM05D005480 ORTHO05D006735 1.5e-65 254.2 211 64.0
Lj7A20T61 Lonicera japonica HOM05D005480 ORTHO05D006735 2.6e-65 253.4 333 52.3
MBI16_g19897_MAGBIO Magnolia biondii HOM05D005480 ORTHO05D006735 5.8e-65 252.3 382 47.4
Lj7A18T44 Lonicera japonica HOM05D005480 ORTHO05D006735 7.6e-65 251.9 337 51.0
CAN.G836.34 Capsicum annuum HOM05D005480 ORTHO05D006735 1.7e-64 250.8 214 63.6
Haze_15193 Corylus avellana HOM05D005480 ORTHO05D006735 6.4e-64 248.8 292 54.8
Dinv26753 Davidia involucrata HOM05D005480 ORTHO05D006735 6.4e-64 248.8 213 62.9
TAR381G0420 Trochodendron aralioides HOM05D005480 ORTHO05D006735 1.1e-63 248.1 283 51.6
Potri.007G036600 Populus trichocarpa HOM05D005480 ORTHO05D006735 1.9e-63 247.3 285 51.9
Sopen02g034920 Solanum pennellii HOM05D005480 ORTHO05D006735 2.4e-63 246.9 323 51.4
Glyma.01G181500 Glycine max HOM05D005480 ORTHO05D006735 4.2e-63 246.1 273 53.5
Nitab4.5_0000108g0300 Nicotiana tabacum HOM05D005480 ORTHO05D006735 5.5e-63 245.7 214 63.6
Solyc02g090230.4 Solanum lycopersicum HOM05D005480 ORTHO05D006735 5.5e-63 245.7 323 51.1
CSS0014684 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 7.1e-63 245.4 213 61.0
TPR.G11349 Trifolium pratense HOM05D005480 ORTHO05D006735 7.1e-63 245.4 334 46.4
Dinv39906 Davidia involucrata HOM05D005480 ORTHO05D006735 9.3e-63 245.0 329 48.9
arahy.Tifrunner.gnm1.ann1.E9URZA Arachis hypogaea HOM05D005480 ORTHO05D006735 1.6e-62 244.2 278 54.3
Lj2g0021055 Lotus japonicus HOM05D005480 ORTHO05D006735 1.6e-62 244.2 241 57.3
CsaV3_6G042900 Cucumis sativus L. HOM05D005480 ORTHO05D006735 2.1e-62 243.8 374 42.8
Nitab4.5_0001014g0070 Nicotiana tabacum HOM05D005480 ORTHO05D006735 2.1e-62 243.8 214 62.6
PSO210G7251 Papaver somniferum HOM05D005480 ORTHO05D006735 2.7e-62 243.4 244 55.3
Prupe.7G142300 Prunus persica HOM05D005480 ORTHO05D006735 3.5e-62 243.0 288 50.3
Sed0026694 Sechium edule HOM05D005480 ORTHO05D006735 3.5e-62 243.0 371 44.7
Aqoxy5G01417 Aquilegia oxysepala HOM05D005480 ORTHO05D006735 4.6e-62 242.7 246 55.7
Ca_24802_v3 Cicer arietinum L. HOM05D005480 ORTHO05D006735 4.6e-62 242.7 335 51.6
QL06p043724 Quercus lobata HOM05D005480 ORTHO05D006735 4.6e-62 242.7 342 47.1
Rhsim02G0168000 Rhododendron simsii HOM05D005480 ORTHO05D006735 4.6e-62 242.7 213 60.6
vmacro05295 Vaccinium macrocarpon HOM05D005480 ORTHO05D006735 6.0e-62 242.3 213 60.6
VMungo1215G2543 Vigna mungo HOM05D005480 ORTHO05D006735 6.0e-62 242.3 245 54.7
Eucgr.H01972 Eucalyptus grandis HOM05D005480 ORTHO05D006735 7.9e-62 241.9 378 49.2
PSO170G5089 Papaver somniferum HOM05D005480 ORTHO05D006735 7.9e-62 241.9 244 54.9
Glyma.11G059700 Glycine max HOM05D005480 ORTHO05D006735 1.0e-61 241.5 245 54.7
PGSC0003DMG400010074 Solanum tuberosum HOM05D005480 ORTHO05D006735 1.0e-61 241.5 322 49.7
Gohir.A12G068600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 1.8e-61 240.7 383 51.4
Hma1.2p1_0546F.1_g176180 Hydrangea macrophylla HOM05D005480 ORTHO05D006735 1.8e-61 240.7 333 55.6
Manes.13G130100 Manihot esculenta HOM05D005480 ORTHO05D006735 1.8e-61 240.7 245 56.3
Phvul.002G022500 Phaseolus vulgaris HOM05D005480 ORTHO05D006735 3.0e-61 240.0 245 55.1
CiPaw.01G026500 Carya illinoinensis HOM05D005480 ORTHO05D006735 3.9e-61 239.6 379 44.6
Duzib187G0998 Durio zibethinus HOM05D005480 ORTHO05D006735 3.9e-61 239.6 287 56.1
MD02G1161300 Malus domestica HOM05D005480 ORTHO05D006735 3.9e-61 239.6 379 43.3
Duzib147G0741 Durio zibethinus HOM05D005480 ORTHO05D006735 5.1e-61 239.2 378 52.9
MD15G1275400 Malus domestica HOM05D005480 ORTHO05D006735 6.7e-61 238.8 215 59.5
Psat2g164160 Pisum sativum HOM05D005480 ORTHO05D006735 8.7e-61 238.4 270 52.2
Sc03g0001260 Simmondsia chinensis HOM05D005480 ORTHO05D006735 8.7e-61 238.4 213 59.6
MSTRG.23794 Avicennia marina HOM05D005480 ORTHO05D006735 1.1e-60 238.0 212 60.4
FvH4_1g14810 Fragaria vesca HOM05D005480 ORTHO05D006735 1.1e-60 238.0 215 59.5
Sabra07G0032600 Salix brachista HOM05D005480 ORTHO05D006735 1.1e-60 238.0 287 51.2
Cc07_g05560 Coffea canephora HOM05D005480 ORTHO05D006735 1.5e-60 237.7 281 52.0
Lalb_Chr09g0322931 Lupinus albus HOM05D005480 ORTHO05D006735 1.5e-60 237.7 252 56.7
Medtr5g018390 Medicago truncatula HOM05D005480 ORTHO05D006735 1.5e-60 237.7 280 51.1
TAR625G1062 Trochodendron aralioides HOM05D005480 ORTHO05D006735 1.5e-60 237.7 342 48.5
THA.LOC104819823 Tarenaya hassleriana HOM05D005480 ORTHO05D006735 2.5e-60 236.9 249 53.8
Thecc.01G048100 Theobroma cacao HOM05D005480 ORTHO05D006735 2.5e-60 236.9 377 49.3
FAN19G1500 Fragaria x ananassa HOM05D005480 ORTHO05D006735 3.3e-60 236.5 215 59.1
Gohir.D12G090600 Gossypium hirsutum HOM05D005480 ORTHO05D006735 3.3e-60 236.5 382 49.0
Ah.02g123950 Amaranthus hybridus HOM05D005480 ORTHO05D006735 9.6e-60 235.0 343 49.0
Hund13586 Selenicereus undatus HOM05D005480 ORTHO05D006735 9.6e-60 235.0 213 58.7
CSS0005424 Camellia sinensis var. sinensis HOM05D005480 ORTHO05D006735 1.3e-59 234.6 213 60.1
CANSAT01G1679 Cannabis sativa HOM05D005480 ORTHO05D006735 1.3e-59 234.6 378 48.4
FAN28G0426 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.6e-59 234.2 215 58.6
SalBow1G5517 Salvia bowleyana HOM05D006685 ORTHO05D008244 1.6e-59 234.2 213 60.6
arahy.Tifrunner.gnm1.ann1.HXIH5S Arachis hypogaea HOM05D005480 ORTHO05D006735 2.1e-59 233.8 313 48.9
Ciclev10025487m.g Citrus clementina HOM05D005480 ORTHO05D006735 6.2e-59 232.3 246 54.1
COL.COLO4_11327 Corchorus olitorius HOM05D005480 ORTHO05D006735 6.2e-59 232.3 284 52.5
MELO3C007529.2 Cucumis melo HOM05D005480 ORTHO05D006735 6.2e-59 232.3 374 42.0
FAN23G2977 Fragaria x ananassa HOM05D005480 ORTHO05D006735 1.1e-58 231.5 382 51.8
Gorai.008G072400 Gossypium raimondii HOM05D005480 ORTHO05D006735 3.1e-58 229.9 382 50.8
CDE02G2721 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 4.0e-58 229.6 204 59.3
AUR62003828 Chenopodium quinoa HOM05D005480 ORTHO05D006735 4.0e-58 229.6 213 56.8
DCAR_021432 Daucus carota HOM05D005480 ORTHO05D006735 4.0e-58 229.6 289 51.2
Nn6g32121 Nelumbo nucifera HOM05D005480 ORTHO05D006735 5.3e-58 229.2 281 53.0
AUR62001975 Chenopodium quinoa HOM05D005480 ORTHO05D006735 6.9e-58 228.8 334 47.0
PGR102G0042 Punica granatum HOM05D005480 ORTHO05D006735 9.0e-58 228.4 338 45.9
FAN26G2127 Fragaria x ananassa HOM05D005480 ORTHO05D006735 2.6e-57 226.9 215 57.2
RcHm_v2.0_Chr2g0103771 Rosa chinensis HOM05D005480 ORTHO05D006735 2.9e-56 223.4 378 45.0
Migut.H00485 Erythranthe guttata HOM05D005480 ORTHO05D006735 1.1e-55 221.5 212 56.1
Thhalv10025060m.g Eutrema salsugineum HOM05D005480 ORTHO05D006735 1.9e-55 220.7 222 59.0
ECA232G3160 Erigeron canadensis HOM05D005480 ORTHO05D006735 2.1e-54 217.2 279 48.4
unitig_899.g14972 Utricularia gibba HOM05D005480 ORTHO05D006735 2.7e-54 216.9 222 56.3
ClCG01G016580 Citrullus lanatus HOM05D005480 ORTHO05D006735 3.5e-54 216.5 420 37.9
HanXRQChr04g0123741 Helianthus annuus HOM05D005480 ORTHO05D006735 6.0e-54 215.7 215 56.7
SGA_v2.0_scaffold15G07231 Striga asiatica HOM05D005480 ORTHO05D006735 7.9e-54 215.3 214 56.5
AL7G13910 Arabidopsis lyrata HOM05D005480 ORTHO05D006735 1.0e-53 214.9 220 57.3
Sp7g34650 Schrenkiella parvula HOM05D005480 ORTHO05D006735 1.0e-53 214.9 383 46.5
Carub.0007s0332 Capsella rubella HOM05D005480 ORTHO05D006735 1.8e-53 214.2 252 52.0
AT4G37130 Arabidopsis thaliana HOM05D005480 ORTHO05D006735 3.9e-53 213.0 220 56.8
Aa31LG6G13860 Aethionema arabicum HOM05D005480 ORTHO05D006735 5.1e-53 212.6 247 53.0
A01p01950 Brassica napus HOM05D005480 ORTHO05D006735 1.5e-52 211.1 309 46.6
BraA01t00184Z Brassica rapa HOM05D005480 ORTHO05D006735 2.5e-52 210.3 309 46.6
CDE01G0732 Ceratophyllum demersum HOM05D005480 ORTHO05D006735 1.3e-51 208.0 366 40.4
Lsat_1_v5_gn_4_179460 Lactuca sativa HOM05D005480 ORTHO05D006735 1.6e-51 207.6 239 51.5
AagrBONN_evm.TU.Sc2ySwM_117.4106 Anthoceros agrestis HOM05D005480 ORTHO05D006735 1.1e-50 204.9 207 56.0
C01p02120 Brassica napus HOM05D005480 ORTHO05D006735 3.1e-50 203.4 222 55.0
CARHR245380 Cardamine hirsuta HOM05D005480 ORTHO05D006735 5.3e-50 202.6 220 54.1
BolC1t00204H Brassica oleracea HOM05D005480 ORTHO05D006735 9.0e-50 201.8 222 55.0
BcaNung03510 Brassica carinata HOM05D005480 ORTHO05D006735 2.0e-49 200.7 308 45.8
BolC3t20222H Brassica oleracea HOM05D005480 ORTHO05D006735 2.2e-48 197.2 228 52.2
Os09g0453500 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 5.0e-48 196.1 207 50.2
Ah.03g144040 Amaranthus hybridus HOM05D005480 ORTHO05D006735 9.4e-47 191.8 213 48.4
A08p22500 Brassica napus HOM05D005480 ORTHO05D006735 1.2e-46 191.4 226 50.0
Mapoly0027s0041 Marchantia polymorpha HOM05D005480 ORTHO05D006735 1.6e-46 191.0 220 52.7
BcaC01g00434 Brassica carinata HOM05D005480 ORTHO05D006735 2.1e-46 190.7 237 51.1
C03p79710 Brassica napus HOM05D005480 ORTHO05D006735 2.1e-46 190.7 237 51.1
BraA08t34205Z Brassica rapa HOM05D005480 ORTHO05D006735 7.9e-46 188.7 226 50.4
BcaB03g12366 Brassica carinata HOM05D005480 ORTHO05D006735 6.7e-45 185.7 233 48.9
Zm00001eb100530 Zea mays HOM05D005480 ORTHO05D006735 6.7e-45 185.7 213 50.2
SHI08751 Sapria himalayana HOM05D005480 ORTHO05D006735 8.2e-43 178.7 213 51.2
Pp3c24_6760 Physcomitrium patens HOM05D005480 ORTHO05D006735 1.1e-42 178.3 186 52.2
Zm00001eb314700 Zea mays HOM05D005480 ORTHO05D006735 1.1e-42 178.3 329 44.4
Lalb_Chr05g0213141 Lupinus albus HOM05D005480 ORTHO05D006735 8.8e-37 158.7 167 54.5
Oeu003952.2 Olea europaea HOM05D005480 ORTHO05D006735 1.1e-36 158.3 460 31.7
SGA_v2.0_scaffold135G34951 Striga asiatica HOM05D005480 ORTHO05D006735 1.8e-34 151.0 282 42.6
BcaB03g12364 Brassica carinata HOM05D005480 ORTHO05D006735 2.0e-33 147.5 194 46.9
GSVIVG01005079001 Vitis vinifera HOM05D005480 ORTHO05D006735 5.0e-32 142.9 142 55.6
Os03g0765400 Oryza sativa ssp. japonica HOM05D005480 ORTHO05D006735 2.7e-30 137.1 212 42.0
Psat5g148720 Pisum sativum HOM05D005480 ORTHO05D006735 1.1e-28 131.7 165 49.1
CBR_g66690 Chara braunii HOM05D005480 ORTHO05D006735 1.3e-27 128.3 223 38.6
Mapoly0016s0112 Marchantia polymorpha HOM05D005480 ORTHO05D006735 7.2e-23 112.5 139 45.3
Cpa.g.c44085 Carica papaya HOM05D005480 ORTHO05D006735 2.1e-22 110.9 231 38.5
Sabra07G0033400 Salix brachista HOM05D005480 ORTHO05D006735 6.3e-19 99.4 71 71.8
HPP92_016039 Vanilla planifolia HOM05D005480 ORTHO05D006735 6.3e-19 99.4 71 66.2
Sabra07G0032900 Salix brachista HOM05D005480 ORTHO05D006735 3.1e-18 97.1 71 70.4
Sabra07G0033100 Salix brachista HOM05D005480 ORTHO05D006735 3.1e-18 97.1 71 70.4
HPP92_016040 Vanilla planifolia HOM05D005480 ORTHO05D006735 1.0e-16 92.0 105 48.6
C04p28170 Brassica napus HOM05D005480 ORTHO05D006735 1.5e-07 61.6 96 41.7
BolC4t24360H Brassica oleracea HOM05D005480 ORTHO05D006735 1.5e-07 61.6 96 41.7
BcaC02g10502 Brassica carinata HOM05D005480 ORTHO05D006735 1.9e-07 61.2 62 53.2
CBR_g66696 Chara braunii HOM05D005480 ORTHO05D006735 4.2e-07 60.1 130 33.1
Cre16.g685217 Chlamydomonas reinhardtii HOM05D005480 ORTHO05D006735 1.6e-06 58.2 170 28.2
PRCOL_00002206 Prasinoderma coloniale HOM05D005480 ORTHO05D006735 2.8e-06 57.4 175 28.0


User provided reference genes

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