Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38441 Sequoiadendron giganteum HOM05D004422 ORTHO05D007331 2.6e-155 552.0 274 100.0
Nn1g00835 Nelumbo nucifera HOM05D004422 ORTHO05D007331 1.7e-106 389.8 198 91.9
AagrBONN_evm.TU.Sc2ySwM_117.3818 Anthoceros agrestis HOM05D004422 ORTHO05D007331 8.5e-106 387.5 214 86.0
PSO782G5506 Papaver somniferum HOM05D004422 ORTHO05D007331 1.1e-105 387.1 269 72.9
Solyc01g090200.4 Solanum lycopersicum HOM05D004422 ORTHO05D007331 1.1e-105 387.1 199 90.5
Sopen01g035990 Solanum pennellii HOM05D004422 ORTHO05D007331 1.1e-105 387.1 199 90.5
Mapoly0186s0003 Marchantia polymorpha HOM05D004422 ORTHO05D007331 1.5e-105 386.7 211 86.7
Peaxi162Scf00475g00041 Petunia axillaris HOM05D004422 ORTHO05D007331 1.9e-105 386.3 267 74.2
Sabra14G0035000 Salix brachista HOM05D004422 ORTHO05D007331 1.9e-105 386.3 229 80.3
Potri.014G049200 Populus trichocarpa HOM05D004422 ORTHO05D007331 2.5e-105 386.0 236 78.4
CiPaw.14G020100 Carya illinoinensis HOM05D004422 ORTHO05D007331 3.2e-105 385.6 232 80.2
CSS0020521 Camellia sinensis var. sinensis HOM05D004422 ORTHO05D007331 7.2e-105 384.4 197 90.4
Dinv43612 Davidia involucrata HOM05D004422 ORTHO05D007331 2.7e-104 382.5 197 89.8
Dinv44059 Davidia involucrata HOM05D004422 ORTHO05D007331 2.7e-104 382.5 195 90.8
Os06g0103600 Oryza sativa ssp. japonica HOM05D004422 ORTHO05D007331 2.7e-104 382.5 216 85.2
ClCG06G002430 Citrullus lanatus HOM05D004422 ORTHO05D007331 3.6e-104 382.1 211 85.3
Lj7C547G5 Lonicera japonica HOM05D004422 ORTHO05D007331 3.6e-104 382.1 197 89.3
QL10p000960 Quercus lobata HOM05D004422 ORTHO05D007331 3.6e-104 382.1 197 89.8
Ciclev10018701m.g Citrus clementina HOM05D004422 ORTHO05D007331 4.7e-104 381.7 197 90.4
Manes.05G055300 Manihot esculenta HOM05D004422 ORTHO05D007331 4.7e-104 381.7 197 89.8
Atru.chr5.121 Acer truncatum HOM05D004422 ORTHO05D007331 6.1e-104 381.3 207 86.5
CANSAT25G3675 Cannabis sativa HOM05D004422 ORTHO05D007331 6.1e-104 381.3 197 89.3
EL10Ac7g18223 Beta vulgaris HOM05D004422 ORTHO05D007331 8.0e-104 380.9 251 74.5
Aqoxy5G04133 Aquilegia oxysepala HOM05D004422 ORTHO05D007331 1.0e-103 380.6 271 67.5
CANSAT25G3884 Cannabis sativa HOM05D004422 ORTHO05D007331 1.0e-103 380.6 199 87.9
Cpa.g.sc22.52 Carica papaya HOM05D004422 ORTHO05D007331 1.0e-103 380.6 218 83.5
Lsat_1_v5_gn_4_39461 Lactuca sativa HOM05D004422 ORTHO05D007331 1.0e-103 380.6 211 84.4
Pp3c1_42870 Physcomitrium patens HOM05D004422 ORTHO05D007331 1.0e-103 380.6 209 84.7
MELO3C022290.2 Cucumis melo HOM05D004422 ORTHO05D007331 1.4e-103 380.2 211 85.3
HanXRQChr16g0521111 Helianthus annuus HOM05D004422 ORTHO05D007331 1.4e-103 380.2 215 82.8
RcHm_v2.0_Chr1g0348021 Rosa chinensis HOM05D004422 ORTHO05D007331 1.8e-103 379.8 236 77.1
CsaV3_6G008710 Cucumis sativus L. HOM05D004422 ORTHO05D007331 2.3e-103 379.4 211 85.3
ECA234G0959 Erigeron canadensis HOM05D004422 ORTHO05D007331 2.3e-103 379.4 213 84.5
FAN03G1687 Fragaria x ananassa HOM05D004422 ORTHO05D007331 3.0e-103 379.0 197 89.3
FAN06G3830 Fragaria x ananassa HOM05D004422 ORTHO05D007331 3.0e-103 379.0 197 89.3
Rhsim07G0036300 Rhododendron simsii HOM05D004422 ORTHO05D007331 3.0e-103 379.0 196 90.3
SGA_v2.0_scaffold340G49325 Striga asiatica HOM05D004422 ORTHO05D007331 3.0e-103 379.0 196 90.3
FAN01G0685 Fragaria x ananassa HOM05D004422 ORTHO05D007331 4.0e-103 378.6 197 88.8
Sed0020409 Sechium edule HOM05D004422 ORTHO05D007331 4.0e-103 378.6 199 88.4
MSTRG.20687 Avicennia marina HOM05D004422 ORTHO05D007331 5.2e-103 378.3 223 80.7
THA.LOC104816999 Tarenaya hassleriana HOM05D004422 ORTHO05D007331 5.2e-103 378.3 195 89.7
MD07G1109400 Malus domestica HOM05D004422 ORTHO05D007331 1.5e-102 376.7 197 89.3
TWI59G1250 Tripterygium wilfordii HOM05D004422 ORTHO05D007331 1.5e-102 376.7 267 70.0
GSVIVG01018288001 Vitis vinifera HOM05D004422 ORTHO05D007331 1.5e-102 376.7 269 71.0
SalBow5G1783 Salvia bowleyana HOM05D004422 ORTHO05D007331 2.0e-102 376.3 215 84.2
Zm00001eb379480 Zea mays HOM05D004422 ORTHO05D007331 2.0e-102 376.3 224 82.1
TAR375G0830 Trochodendron aralioides HOM05D004422 ORTHO05D007331 2.6e-102 375.9 255 73.3
Thhalv10018047m.g Eutrema salsugineum HOM05D004422 ORTHO05D007331 3.4e-102 375.6 199 88.4
Gohir.A08G029300 Gossypium hirsutum HOM05D004422 ORTHO05D007331 3.4e-102 375.6 197 88.3
Gohir.D08G040000 Gossypium hirsutum HOM05D004422 ORTHO05D007331 4.4e-102 375.2 197 87.8
Gorai.004G038800 Gossypium raimondii HOM05D004422 ORTHO05D007331 4.4e-102 375.2 197 87.8
FAN10G2373 Fragaria x ananassa HOM05D004422 ORTHO05D007331 7.5e-102 374.4 197 87.8
Glyma.03G110500 Glycine max HOM05D004422 ORTHO05D007331 9.8e-102 374.0 196 88.3
Lj3g0007750 Lotus japonicus HOM05D004422 ORTHO05D007331 9.8e-102 374.0 197 88.3
ATR0057G028 Amborella trichopoda HOM05D004422 ORTHO05D007331 1.3e-101 373.6 209 84.7
Nitab4.5_0000920g0050 Nicotiana tabacum HOM05D004422 ORTHO05D007331 1.3e-101 373.6 218 82.1
Sp5g30300 Schrenkiella parvula HOM05D004422 ORTHO05D007331 1.3e-101 373.6 195 89.7
A07p29020 Brassica napus HOM05D004422 ORTHO05D007331 1.7e-101 373.2 195 89.7
C06p32790 Brassica napus HOM05D004422 ORTHO05D007331 1.7e-101 373.2 195 89.7
BolC6t38401H Brassica oleracea HOM05D004422 ORTHO05D007331 1.7e-101 373.2 195 89.7
BraA07t30542Z Brassica rapa HOM05D004422 ORTHO05D007331 1.7e-101 373.2 195 89.7
Ca_25801_v3 Cicer arietinum L. HOM05D004422 ORTHO05D007331 1.7e-101 373.2 192 89.6
VMungo0331G1046 Vigna mungo HOM05D004422 ORTHO05D007331 1.7e-101 373.2 192 89.6
AUR62025581 Chenopodium quinoa HOM05D004422 ORTHO05D007331 2.2e-101 372.9 250 74.0
Thecc.01G395500 Theobroma cacao HOM05D004422 ORTHO05D007331 3.7e-101 372.1 218 80.7
arahy.Tifrunner.gnm1.ann1.Q83G00 Arachis hypogaea HOM05D004422 ORTHO05D007331 4.8e-101 371.7 192 89.1
Migut.B01531 Erythranthe guttata HOM05D004422 ORTHO05D007331 4.8e-101 371.7 196 88.8
Psat4g224760 Pisum sativum HOM05D004422 ORTHO05D007331 4.8e-101 371.7 192 88.5
Duzib268G0035 Durio zibethinus HOM05D004422 ORTHO05D007331 6.3e-101 371.3 235 75.7
TPR.G33119 Trifolium pratense HOM05D004422 ORTHO05D007331 6.3e-101 371.3 192 89.1
Medtr8g006955 Medicago truncatula HOM05D004422 ORTHO05D007331 8.3e-101 370.9 192 89.1
AL5G27440 Arabidopsis lyrata HOM05D004422 ORTHO05D007331 1.8e-100 369.8 200 87.0
AT3G48110 Arabidopsis thaliana HOM05D004422 ORTHO05D007331 1.8e-100 369.8 195 89.2
Carub.0005s1421 Capsella rubella HOM05D004422 ORTHO05D007331 1.8e-100 369.8 195 89.2
Lalb_Chr07g0195401 Lupinus albus HOM05D004422 ORTHO05D007331 1.8e-100 369.8 206 84.0
Aa31LG1G11470 Aethionema arabicum HOM05D004422 ORTHO05D007331 5.4e-100 368.2 195 88.7
Hund18610 Selenicereus undatus HOM05D004422 ORTHO05D007331 1.2e-99 367.1 235 76.6
Ah.15g094660 Amaranthus hybridus HOM05D004422 ORTHO05D007331 1.6e-99 366.7 262 69.5
CBR_g19146 Chara braunii HOM05D004422 ORTHO05D007331 2.7e-99 365.9 197 85.3
SGA_v2.0_scaffold52G19227 Striga asiatica HOM05D004422 ORTHO05D007331 1.3e-98 363.6 216 79.6
BcaB02g07011 Brassica carinata HOM05D004422 ORTHO05D007331 5.0e-98 361.7 206 84.5
Haze_02852 Corylus avellana HOM05D004422 ORTHO05D007331 4.7e-96 355.1 271 67.9
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 2.0e-94 349.7 183 87.4
PRCOL_00000491 Prasinoderma coloniale HOM05D004422 ORTHO05D007331 5.7e-94 348.2 195 82.1
Cre10.g433000 Chlamydomonas reinhardtii HOM05D004422 ORTHO05D007331 9.2e-92 340.9 195 81.0
Cc02_g25150 Coffea canephora HOM05D004422 ORTHO05D007331 1.0e-90 337.4 217 77.4
MCO03G257 Micromonas commoda HOM05D004422 ORTHO05D007331 1.3e-90 337.0 196 78.6
Actinidia18350 Actinidia chinensis HOM05D004422 ORTHO05D007331 5.0e-90 335.1 197 82.2
DCAR_029470 Daucus carota HOM05D004422 ORTHO05D007331 5.0e-90 335.1 172 90.1
Nitab4.5_0002685g0030 Nicotiana tabacum HOM05D004422 ORTHO05D007331 8.6e-90 334.3 294 64.3
HPP92_002531 Vanilla planifolia HOM05D004422 ORTHO05D007331 8.6e-90 334.3 172 89.5
Eucgr.H04784 Eucalyptus grandis HOM05D004422 ORTHO05D007331 2.5e-89 332.8 240 69.6
COL.COLO4_07156 Corchorus olitorius HOM05D004422 ORTHO05D007331 3.0e-87 325.9 200 78.0
Sc12g0011040 Simmondsia chinensis HOM05D004422 ORTHO05D007331 5.7e-86 321.6 166 88.6
arahy.Tifrunner.gnm1.ann1.NVW2FV Arachis hypogaea HOM05D004422 ORTHO05D007331 2.2e-85 319.7 165 89.1
CAN.G1497.17 Capsicum annuum HOM05D004422 ORTHO05D007331 2.9e-85 319.3 226 71.2
Oeu000053.1 Olea europaea HOM05D004422 ORTHO05D007331 2.0e-83 313.2 160 90.6
vmacro13500 Vaccinium macrocarpon HOM05D004422 ORTHO05D007331 7.8e-83 311.2 196 78.6
Cfa011065 Carpinus fangiana HOM05D004422 ORTHO05D007331 3.0e-82 309.3 271 61.3
CDE09G1306 Ceratophyllum demersum HOM05D004422 ORTHO05D007331 1.5e-78 297.0 165 84.8
Prupe.2G132400 Prunus persica HOM05D004422 ORTHO05D007331 1.2e-72 277.3 143 89.5
Phvul.010G049401 Phaseolus vulgaris HOM05D004422 ORTHO05D007331 2.1e-72 276.6 142 89.4
COL.COLO4_30046 Corchorus olitorius HOM05D004422 ORTHO05D007331 1.8e-71 273.5 220 63.6
Haze_27357 Corylus avellana HOM05D004422 ORTHO05D007331 8.1e-64 248.1 197 57.9
Actinidia32507 Actinidia chinensis HOM05D004422 ORTHO05D007331 1.1e-49 201.1 104 89.4
QL04p030068 Quercus lobata HOM05D004422 ORTHO05D007331 5.3e-47 192.2 107 83.2
unitig_0.g1355 Utricularia gibba HOM05D004422 ORTHO05D007331 4.5e-38 162.5 81 91.4
FvH4_7g10270 Fragaria vesca HOM05D004422 ORTHO05D007331 1.5e-25 120.9 63 93.7
FAN06G1066 Fragaria x ananassa HOM05D004422 ORTHO05D007331 6.5e-21 105.5 55 87.3
FAN10G4150 Fragaria x ananassa HOM05D004422 ORTHO05D007331 6.5e-21 105.5 55 87.3
Thecc.01G108300 Theobroma cacao HOM05D004422 ORTHO05D408993 1.1e-07 61.6 50 64.0
Thecc.04G201300 Theobroma cacao HOM05D004422 ORTHO05D001336 4.1e-07 59.7 29 82.8


User provided reference genes

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