Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_38205 Sequoiadendron giganteum HOM05D027190 ORTHO05D004692 4.0e-240 834.3 413 100.0
SEGI_27595 Sequoiadendron giganteum HOM05D027190 ORTHO05D004692 1.1e-162 577.0 301 94.4
SEGI_27640 Sequoiadendron giganteum HOM05D027190 ORTHO05D004692 3.3e-125 452.6 299 78.3
SEGI_27755 Sequoiadendron giganteum HOM05D027190 ORTHO05D004692 4.9e-97 359.0 227 79.3
SEGI_09707 Sequoiadendron giganteum HOM05D004190 ORTHO05D004692 1.5e-21 108.2 169 37.9
ATR0559G266 Amborella trichopoda HOM05D004190 ORTHO05D004692 1.9e-16 91.3 141 36.9
MBI05_g22031_MAGBIO Magnolia biondii HOM05D004190 ORTHO05D004692 4.7e-15 86.7 153 37.3
Eucgr.J02050 Eucalyptus grandis HOM05D004190 ORTHO05D004692 6.1e-15 86.3 159 36.5
MD11G1107500 Malus domestica HOM05D004190 ORTHO05D004692 5.2e-14 83.2 174 33.9
CsaV3_1G034280 Cucumis sativus L. HOM05D004190 ORTHO05D004692 6.8e-14 82.8 138 37.7
Atru.chr3.3912 Acer truncatum HOM05D004190 ORTHO05D004692 8.8e-14 82.4 140 40.0
Sed0024869 Sechium edule HOM05D004190 ORTHO05D004692 1.2e-13 82.0 139 34.5
Sed0018693 Sechium edule HOM05D004190 ORTHO05D004692 1.5e-13 81.6 138 37.7
CiPaw.13G093900 Carya illinoinensis HOM05D004190 ORTHO05D004692 5.7e-13 79.7 154 35.7
Aa31LG4G15580 Aethionema arabicum HOM05D004190 ORTHO05D004692 7.5e-13 79.3 155 32.3
CANSAT54G1895 Cannabis sativa HOM05D004190 ORTHO05D004692 9.8e-13 79.0 179 30.7
ClCG03G001470 Citrullus lanatus HOM05D004190 ORTHO05D004692 9.8e-13 79.0 138 35.5
MD03G1092700 Malus domestica HOM05D004190 ORTHO05D004692 3.7e-12 77.0 211 30.3
SEGI_35246 Sequoiadendron giganteum HOM05D004190 ORTHO05D004692 1.1e-11 75.5 80 50.0
CDE02G2475 Ceratophyllum demersum HOM05D004190 ORTHO05D004692 1.4e-11 75.1 168 28.6
FAN16G2398 Fragaria x ananassa HOM05D004190 ORTHO05D004692 1.8e-11 74.7 151 35.1
CiPaw.04G135700 Carya illinoinensis HOM05D004190 ORTHO05D004692 2.4e-11 74.3 182 30.8
Prupe.6G076700 Prunus persica HOM05D004190 ORTHO05D004692 2.4e-11 74.3 152 34.9
Thhalv10002683m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 3.1e-11 73.9 124 34.7
Gohir.A05G095600 Gossypium hirsutum HOM05D004190 ORTHO05D004692 4.1e-11 73.6 195 27.7
Gohir.D05G095900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 4.1e-11 73.6 191 27.2
PGR119G1862 Punica granatum HOM05D004190 ORTHO05D004692 4.1e-11 73.6 145 35.2
FvH4_3g36180 Fragaria vesca HOM05D004190 ORTHO05D004692 5.4e-11 73.2 176 34.1
Gorai.009G099200 Gossypium raimondii HOM05D004190 ORTHO05D004692 5.4e-11 73.2 195 27.7
Sc21g0005810 Simmondsia chinensis HOM05D004190 ORTHO05D004692 5.4e-11 73.2 143 37.1
TWI79G1380 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 5.4e-11 73.2 157 33.8
BraA10t43742Z Brassica rapa HOM05D000173 ORTHO05D000316 7.0e-11 72.8 199 30.7
Duzib170G0106 Durio zibethinus HOM05D004190 ORTHO05D004692 7.0e-11 72.8 144 32.6
Solyc11g068740.2 Solanum lycopersicum HOM05D004190 ORTHO05D004692 7.0e-11 72.8 182 31.3
GSVIVG01024954001 Vitis vinifera HOM05D004190 ORTHO05D004692 7.0e-11 72.8 138 33.3
FAN25G3130 Fragaria x ananassa HOM05D004190 ORTHO05D004692 2.0e-10 71.2 178 33.1
Sc24g0002450 Simmondsia chinensis HOM05D004190 ORTHO05D004692 2.0e-10 71.2 170 32.9
Sopen11g027450 Solanum pennellii HOM05D004190 ORTHO05D004692 2.0e-10 71.2 182 30.8
PGSC0003DMG400026344 Solanum tuberosum HOM05D004190 ORTHO05D004692 2.0e-10 71.2 181 28.7
Thecc.09G321100 Theobroma cacao HOM05D004190 ORTHO05D004692 2.0e-10 71.2 175 29.7
AL5G25450 Arabidopsis lyrata HOM05D004190 ORTHO05D004692 2.7e-10 70.9 124 35.5
FAN11G2049 Fragaria x ananassa HOM05D004190 ORTHO05D004692 2.7e-10 70.9 169 33.1
Sp6g21060 Schrenkiella parvula HOM05D004190 ORTHO05D004692 2.7e-10 70.9 135 33.3
THA.LOC104814877 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 2.7e-10 70.9 128 35.2
BcaC04g19780 Brassica carinata HOM05D004190 ORTHO05D004692 3.5e-10 70.5 135 34.8
COL.COLO4_18512 Corchorus olitorius HOM05D004190 ORTHO05D004692 4.5e-10 70.1 174 30.5
FAN21G2646 Fragaria x ananassa HOM05D004190 ORTHO05D004692 4.5e-10 70.1 178 33.7
Potri.009G031100 Populus trichocarpa HOM05D004190 ORTHO05D004692 4.5e-10 70.1 173 29.5
Duzib150G1353 Durio zibethinus HOM05D004190 ORTHO05D004692 5.9e-10 69.7 156 31.4
RcHm_v2.0_Chr5g0064931 Rosa chinensis HOM05D004190 ORTHO05D004692 7.8e-10 69.3 171 31.6
AT3G46580 Arabidopsis thaliana HOM05D004190 ORTHO05D004692 1.0e-09 68.9 124 33.1
Nitab4.5_0003516g0050 Nicotiana tabacum HOM05D004190 ORTHO05D004692 1.0e-09 68.9 162 27.8
TWI31G0561 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 1.0e-09 68.9 219 28.8
C09p51780 Brassica napus HOM05D000173 ORTHO05D004692 1.3e-09 68.6 200 31.5
BolC9t58040H Brassica oleracea HOM05D000173 ORTHO05D004692 1.3e-09 68.6 200 31.5
EL10Ac7g16022 Beta vulgaris HOM05D004190 ORTHO05D004692 1.7e-09 68.2 147 32.7
TAR623G1294 Trochodendron aralioides HOM05D004190 ORTHO05D004692 1.7e-09 68.2 143 32.9
Actinidia07264 Actinidia chinensis HOM05D004190 ORTHO05D004692 2.3e-09 67.8 138 31.9
Ah.15g097420 Amaranthus hybridus HOM05D004190 ORTHO05D004692 2.3e-09 67.8 130 30.8
Aqoxy4G02933 Aquilegia oxysepala HOM05D004190 ORTHO05D004692 2.3e-09 67.8 128 31.2
BcaB08g36263 Brassica carinata HOM05D004190 ORTHO05D004692 2.3e-09 67.8 135 31.9
Thhalv10014530m.g Eutrema salsugineum HOM05D004190 ORTHO05D004692 2.3e-09 67.8 132 34.1
Sp5g15120 Schrenkiella parvula HOM05D004190 ORTHO05D004692 2.3e-09 67.8 125 32.8
Carub.0008s2005 Capsella rubella HOM05D004190 ORTHO05D004692 2.9e-09 67.4 134 30.6
Ah.08g219540 Amaranthus hybridus HOM05D004190 ORTHO05D004692 3.8e-09 67.0 153 29.4
C02p12490 Brassica napus HOM05D000173 ORTHO05D000316 3.8e-09 67.0 179 25.7
BraA03t10485Z Brassica rapa HOM05D004190 ORTHO05D004692 5.0e-09 66.6 134 32.1
Aa31sc23G430 Aethionema arabicum HOM05D004190 ORTHO05D004692 6.6e-09 66.2 144 30.6
BcaB05g22507 Brassica carinata HOM05D004190 ORTHO05D004692 6.6e-09 66.2 180 28.3
AL8G35820 Arabidopsis lyrata HOM05D004190 ORTHO05D004692 8.6e-09 65.9 135 31.1
BcaC03g14013 Brassica carinata HOM05D004190 ORTHO05D004692 8.6e-09 65.9 182 26.9
BcaC09g49754 Brassica carinata HOM05D004190 ORTHO05D004692 8.6e-09 65.9 130 33.1
C01p33300 Brassica napus HOM05D004190 ORTHO05D004692 8.6e-09 65.9 130 33.1
BolC1t03263H Brassica oleracea HOM05D004190 ORTHO05D004692 8.6e-09 65.9 130 33.1
BolC2t07349H Brassica oleracea HOM05D004190 ORTHO05D004692 8.6e-09 65.9 182 26.9
Carub.0005s1285 Capsella rubella HOM05D004190 ORTHO05D004692 8.6e-09 65.9 157 29.9
CDE08G1317 Ceratophyllum demersum HOM05D004190 ORTHO05D004692 8.6e-09 65.9 111 34.2
Nitab4.5_0001135g0020 Nicotiana tabacum HOM05D004190 ORTHO05D004692 8.6e-09 65.9 165 29.1
BraA01t02543Z Brassica rapa HOM05D004190 ORTHO05D004692 1.1e-08 65.5 130 33.1
BcaB01g04590 Brassica carinata HOM05D004190 ORTHO05D004692 1.5e-08 65.1 134 32.8
SEGI_04263 Sequoiadendron giganteum HOM05D016141 ORTHO05D004692 2.5e-08 64.3 64 50.0
AT5G59380 Arabidopsis thaliana HOM05D004190 ORTHO05D004692 3.3e-08 63.9 134 30.6
Nn2g13344 Nelumbo nucifera HOM05D004190 ORTHO05D004692 3.3e-08 63.9 138 32.6
Peaxi162Scf00224g00513 Petunia axillaris HOM05D004190 ORTHO05D004692 3.3e-08 63.9 143 28.7
Oeu048854.1 Olea europaea HOM05D004190 ORTHO05D004692 4.3e-08 63.5 138 31.9
BcaB01g04586 Brassica carinata HOM05D004190 ORTHO05D004692 5.6e-08 63.2 132 31.8
Cc01_g08740 Coffea canephora HOM05D004190 ORTHO05D004692 5.6e-08 63.2 192 29.2
Gohir.D13G232900 Gossypium hirsutum HOM05D004190 ORTHO05D004692 5.6e-08 63.2 155 29.0
MBI18_g01149_MAGBIO Magnolia biondii HOM05D003520 ORTHO05D003332 5.6e-08 63.2 54 50.0
Hund18906 Selenicereus undatus HOM05D004190 ORTHO05D004692 5.6e-08 63.2 140 28.6
BcaC01g06528 Brassica carinata HOM05D004190 ORTHO05D004692 1.2e-07 62.0 135 32.6
Cpa.g.sc81.141 Carica papaya HOM05D004190 ORTHO05D004692 1.2e-07 62.0 172 29.7
Gohir.A13G227300 Gossypium hirsutum HOM05D004190 ORTHO05D004692 1.2e-07 62.0 188 27.7
Gorai.013G263700 Gossypium raimondii HOM05D004190 ORTHO05D004692 1.2e-07 62.0 155 29.0
BraA02t05794Z Brassica rapa HOM05D004190 ORTHO05D004692 2.1e-07 61.2 180 26.7
C03p13790 Brassica napus HOM05D004190 ORTHO05D004692 2.8e-07 60.8 207 26.6
CARHR285750 Cardamine hirsuta HOM05D004190 ORTHO05D004692 2.8e-07 60.8 134 30.6
Cfa011508 Carpinus fangiana HOM05D004190 ORTHO05D004692 2.8e-07 60.8 77 41.6
PGSC0003DMG400024773 Solanum tuberosum HOM05D004190 ORTHO05D004692 3.6e-07 60.5 132 32.6
CAN.G859.7 Capsicum annuum HOM05D003520 ORTHO05D003332 4.7e-07 60.1 136 30.9
Hund04953 Selenicereus undatus HOM05D004190 ORTHO05D004692 4.7e-07 60.1 169 32.0
THA.LOC104810778 Tarenaya hassleriana HOM05D004190 ORTHO05D004692 4.7e-07 60.1 126 31.0
CARHR155230 Cardamine hirsuta HOM05D004190 ORTHO05D004692 6.1e-07 59.7 136 30.9
Manes.01G173632 Manihot esculenta HOM05D004190 ORTHO05D004692 6.1e-07 59.7 130 30.8
ATR0680G240 Amborella trichopoda HOM05D003520 ORTHO05D003332 8.0e-07 59.3 136 28.7
TWI31G1174 Tripterygium wilfordii HOM05D004190 ORTHO05D004692 8.0e-07 59.3 166 30.7
unitig_8.g3659 Utricularia gibba HOM05D004190 ORTHO05D004692 8.0e-07 59.3 60 48.3
Thecc.03G274800 Theobroma cacao HOM05D003520 ORTHO05D003332 1.0e-06 58.9 72 41.7
Aqoxy7G00385 Aquilegia oxysepala HOM05D003520 ORTHO05D003332 1.8e-06 58.2 58 48.3
Ciclev10029152m.g Citrus clementina HOM05D004190 ORTHO05D004692 2.3e-06 57.8 170 30.6
Lj3g0009171 Lotus japonicus HOM05D006496 ORTHO05D008390 2.3e-06 57.8 141 31.2
BcaB05g23553 Brassica carinata HOM05D004190 ORTHO05D004692 3.0e-06 57.4 122 30.3
Migut.N02470 Erythranthe guttata HOM05D004190 ORTHO05D004692 3.0e-06 57.4 82 37.8
COL.COLO4_34422 Corchorus olitorius HOM05D003520 ORTHO05D003332 6.8e-06 56.2 111 30.6


User provided reference genes

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