Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37847 Sequoiadendron giganteum HOM05D005180 ORTHO05D006136 1.4e-95 353.2 215 100.0
Hma1.2p1_1711F.1_g298680 Hydrangea macrophylla HOM05D005180 ORTHO05D006136 1.7e-61 240.0 191 68.6
TAR374G0042 Trochodendron aralioides HOM05D005180 ORTHO05D006136 2.3e-61 239.6 191 68.6
CSS0011166 Camellia sinensis var. sinensis HOM05D005180 ORTHO05D006136 5.6e-60 235.0 191 67.0
Rhsim04G0005300 Rhododendron simsii HOM05D005180 ORTHO05D006136 5.6e-60 235.0 191 67.0
Peaxi162Scf00050g01910 Petunia axillaris HOM05D005180 ORTHO05D006136 2.1e-59 233.0 191 67.0
Actinidia07010 Actinidia chinensis HOM05D005180 ORTHO05D006136 2.8e-59 232.6 191 66.5
Dinv35897 Davidia involucrata HOM05D005180 ORTHO05D006136 3.6e-59 232.3 191 67.0
Migut.D00701 Erythranthe guttata HOM05D005180 ORTHO05D006136 3.6e-59 232.3 191 67.0
SGA_v2.0_scaffold29G12131 Striga asiatica HOM05D005180 ORTHO05D006136 3.6e-59 232.3 192 67.7
Actinidia24488 Actinidia chinensis HOM05D005180 ORTHO05D006136 4.7e-59 231.9 191 66.5
vmacro07270 Vaccinium macrocarpon HOM05D005180 ORTHO05D006136 6.1e-59 231.5 191 66.5
Cc01_g07100 Coffea canephora HOM05D005180 ORTHO05D006136 8.0e-59 231.1 191 66.5
Rhsim13G0203300 Rhododendron simsii HOM05D005180 ORTHO05D006136 8.0e-59 231.1 191 66.0
Aqoxy3G02241 Aquilegia oxysepala HOM05D005180 ORTHO05D006136 1.0e-58 230.7 191 68.1
MSTRG.18479 Avicennia marina HOM05D005180 ORTHO05D006136 1.4e-58 230.3 191 65.4
GSVIVG01037378001 Vitis vinifera HOM05D005180 ORTHO05D006136 1.4e-58 230.3 191 67.0
Nn8g41146 Nelumbo nucifera HOM05D005180 ORTHO05D006136 1.8e-58 229.9 190 66.3
Nitab4.5_0000428g0030 Nicotiana tabacum HOM05D005180 ORTHO05D006136 2.3e-58 229.6 191 64.9
Thecc.05G216000 Theobroma cacao HOM05D005180 ORTHO05D006136 4.0e-58 228.8 191 66.0
PSO063G1868 Papaver somniferum HOM05D005180 ORTHO05D006136 8.9e-58 227.6 191 66.0
unitig_62.g23868 Utricularia gibba HOM05D005180 ORTHO05D006136 1.2e-57 227.3 190 65.8
unitig_64.g29770 Utricularia gibba HOM05D005180 ORTHO05D006136 1.2e-57 227.3 190 65.8
Nitab4.5_0002915g0060 Nicotiana tabacum HOM05D005180 ORTHO05D006136 1.5e-57 226.9 191 64.4
Oeu032043.1 Olea europaea HOM05D005180 ORTHO05D006136 1.5e-57 226.9 188 66.0
PSO782G2417 Papaver somniferum HOM05D005180 ORTHO05D006136 2.0e-57 226.5 191 65.4
Aqoxy5G01637 Aquilegia oxysepala HOM05D005180 ORTHO05D006136 2.6e-57 226.1 191 66.5
CAN.G1085.4 Capsicum annuum HOM05D005180 ORTHO05D006136 2.6e-57 226.1 191 64.9
Mapoly0076s0002 Marchantia polymorpha HOM05D005180 ORTHO05D006136 2.6e-57 226.1 191 64.9
Os08g0160000 Oryza sativa ssp. japonica HOM05D005180 ORTHO05D006136 2.6e-57 226.1 189 64.6
SalBow6G2568 Salvia bowleyana HOM05D005180 ORTHO05D006136 2.6e-57 226.1 191 64.9
PGSC0003DMG400022705 Solanum tuberosum HOM05D005180 ORTHO05D006136 4.4e-57 225.3 188 64.9
Ciclev10021949m.g Citrus clementina HOM05D005180 ORTHO05D006136 5.7e-57 224.9 189 64.6
Phvul.006G178100 Phaseolus vulgaris HOM05D005180 ORTHO05D006136 5.7e-57 224.9 191 62.8
CDE02G3757 Ceratophyllum demersum HOM05D005180 ORTHO05D006136 7.5e-57 224.6 191 63.9
Duzib106G0272 Durio zibethinus HOM05D005180 ORTHO05D006136 7.5e-57 224.6 191 64.4
Haze_00396 Corylus avellana HOM05D005180 ORTHO05D006136 9.8e-57 224.2 188 63.8
HanXRQChr01g0020751 Helianthus annuus HOM05D005180 ORTHO05D006136 9.8e-57 224.2 190 64.2
Psat1g199720 Pisum sativum HOM05D005180 ORTHO05D006136 9.8e-57 224.2 191 63.4
Ca_00419_v3 Cicer arietinum L. HOM05D005180 ORTHO05D006136 1.3e-56 223.8 191 62.8
Glyma.13G232100 Glycine max HOM05D005180 ORTHO05D006136 1.3e-56 223.8 192 63.0
Glyma.15G080600 Glycine max HOM05D005180 ORTHO05D006136 1.3e-56 223.8 192 63.0
TPR.G11750 Trifolium pratense HOM05D005180 ORTHO05D006136 1.3e-56 223.8 191 63.4
VMungo0540G0753 Vigna mungo HOM05D005180 ORTHO05D006136 1.3e-56 223.8 191 62.8
Sopen11g029830 Solanum pennellii HOM05D005180 ORTHO05D006136 2.2e-56 223.0 191 64.4
PGSC0003DMG400027389 Solanum tuberosum HOM05D005180 ORTHO05D006136 2.2e-56 223.0 191 64.4
Duzib177G0947 Durio zibethinus HOM05D005180 ORTHO05D006136 4.9e-56 221.9 191 63.9
MBI19_g22663_MAGBIO Magnolia biondii HOM05D005180 ORTHO05D006136 4.9e-56 221.9 186 66.1
COL.COLO4_15239 Corchorus olitorius HOM05D005180 ORTHO05D006136 6.4e-56 221.5 191 63.4
HPP92_017562 Vanilla planifolia HOM05D005180 ORTHO05D006136 6.4e-56 221.5 191 62.8
CAN.G714.6 Capsicum annuum HOM05D005180 ORTHO05D006136 8.3e-56 221.1 191 63.4
DCAR_016143 Daucus carota HOM05D005180 ORTHO05D006136 8.3e-56 221.1 188 63.8
Medtr2g015520 Medicago truncatula HOM05D005180 ORTHO05D006136 8.3e-56 221.1 191 63.4
CiPaw.06G034400 Carya illinoinensis HOM05D005180 ORTHO05D006136 1.1e-55 220.7 191 61.8
Eucgr.D02531 Eucalyptus grandis HOM05D005180 ORTHO05D006136 1.4e-55 220.3 191 62.8
Solyc01g008990.4 Solanum lycopersicum HOM05D005180 ORTHO05D006136 1.4e-55 220.3 187 64.2
ATR0829G067 Amborella trichopoda HOM05D005180 ORTHO05D006136 1.8e-55 219.9 191 63.4
AagrBONN_evm.TU.Sc2ySwM_344.1992 Anthoceros agrestis HOM05D005180 ORTHO05D006136 2.4e-55 219.5 191 63.4
Cfa016051 Carpinus fangiana HOM05D005180 ORTHO05D006136 2.4e-55 219.5 187 63.6
PGR004G2116 Punica granatum HOM05D005180 ORTHO05D006136 3.2e-55 219.2 191 62.3
Gohir.A02G141500 Gossypium hirsutum HOM05D005180 ORTHO05D006136 4.1e-55 218.8 191 62.3
Gorai.003G054000 Gossypium raimondii HOM05D005180 ORTHO05D006136 4.1e-55 218.8 191 62.3
Gohir.D03G052000 Gossypium hirsutum HOM05D005180 ORTHO05D006136 9.2e-55 217.6 191 62.3
Lsat_1_v5_gn_1_93761 Lactuca sativa HOM05D005180 ORTHO05D006136 9.2e-55 217.6 190 62.1
Sed0003176 Sechium edule HOM05D005180 ORTHO05D006136 9.2e-55 217.6 191 62.8
TWI60G1377 Tripterygium wilfordii HOM05D005180 ORTHO05D006136 1.2e-54 217.2 190 63.2
QL09p023193 Quercus lobata HOM05D005180 ORTHO05D006136 1.6e-54 216.9 191 61.3
SMO356G0075 Selaginella moellendorffii HOM05D005180 ORTHO05D006136 1.6e-54 216.9 188 62.8
Lalb_Chr20g0121321 Lupinus albus HOM05D005180 ORTHO05D006136 2.0e-54 216.5 193 60.6
Sopen01g004480 Solanum pennellii HOM05D005180 ORTHO05D006136 2.0e-54 216.5 187 63.1
ClCG09G016930 Citrullus lanatus HOM05D005180 ORTHO05D006136 2.7e-54 216.1 191 61.8
CsaV3_2G036420 Cucumis sativus L. HOM05D005180 ORTHO05D006136 2.7e-54 216.1 191 61.8
MELO3C021887.2 Cucumis melo HOM05D005180 ORTHO05D006136 3.5e-54 215.7 191 61.8
FAN27G2246 Fragaria x ananassa HOM05D005180 ORTHO05D006136 3.5e-54 215.7 192 61.5
Nitab4.5_0002161g0010 Nicotiana tabacum HOM05D005180 ORTHO05D006136 3.5e-54 215.7 190 63.7
TWI32G1096 Tripterygium wilfordii HOM05D005180 ORTHO05D006136 3.5e-54 215.7 191 61.8
Potri.013G080200 Populus trichocarpa HOM05D005180 ORTHO05D006136 4.6e-54 215.3 191 61.8
MD10G1023900 Malus domestica HOM05D005180 ORTHO05D006136 7.8e-54 214.5 191 61.3
FAN20G0932 Fragaria x ananassa HOM05D005180 ORTHO05D006136 1.3e-53 213.8 192 60.9
Lj6g0006583 Lotus japonicus HOM05D005180 ORTHO05D006136 1.3e-53 213.8 194 60.3
Nitab4.5_0002567g0080 Nicotiana tabacum HOM05D005180 ORTHO05D006136 1.3e-53 213.8 191 62.3
Atru.chr5.727 Acer truncatum HOM05D005180 ORTHO05D006136 1.7e-53 213.4 186 63.4
Sabra13G0072900 Salix brachista HOM05D005180 ORTHO05D006136 1.7e-53 213.4 191 61.3
Prupe.8G027400 Prunus persica HOM05D005180 ORTHO05D006136 2.3e-53 213.0 191 60.7
RcHm_v2.0_Chr6g0275831 Rosa chinensis HOM05D005180 ORTHO05D006136 2.3e-53 213.0 191 60.7
FvH4_2g13990 Fragaria vesca HOM05D005180 ORTHO05D006136 3.0e-53 212.6 192 60.4
Lj2P827T12 Lonicera japonica HOM05D005180 ORTHO05D006136 3.9e-53 212.2 185 62.7
ECA240G0118 Erigeron canadensis HOM05D005180 ORTHO05D006136 5.0e-53 211.8 188 61.7
FAN24G0415 Fragaria x ananassa HOM05D005180 ORTHO05D006136 5.0e-53 211.8 192 60.4
Manes.08G064700 Manihot esculenta HOM05D005180 ORTHO05D006136 5.0e-53 211.8 190 62.1
Pp3c15_21620 Physcomitrium patens HOM05D005180 ORTHO05D006136 5.0e-53 211.8 191 62.3
CANSAT56G1354 Cannabis sativa HOM05D005180 ORTHO05D006136 8.6e-53 211.1 189 60.8
Oeu025945.2 Olea europaea HOM05D005180 ORTHO05D006136 8.6e-53 211.1 182 64.3
Zm00001eb403820 Zea mays HOM05D005180 ORTHO05D006136 1.1e-52 210.7 189 60.8
Sc24g0001580 Simmondsia chinensis HOM05D005180 ORTHO05D006136 1.5e-52 210.3 191 59.7
arahy.Tifrunner.gnm1.ann1.F0IXSY Arachis hypogaea HOM05D005180 ORTHO05D006136 2.5e-52 209.5 192 59.4
arahy.Tifrunner.gnm1.ann1.ZTB6Z9 Arachis hypogaea HOM05D005180 ORTHO05D006136 2.5e-52 209.5 192 59.4
arahy.Tifrunner.gnm1.ann1.T3IE7U Arachis hypogaea HOM05D005180 ORTHO05D006136 3.3e-52 209.1 192 58.9
arahy.Tifrunner.gnm1.ann1.ZY7ZXH Arachis hypogaea HOM05D005180 ORTHO05D006136 3.3e-52 209.1 192 59.4
Dinv16767 Davidia involucrata HOM05D005180 ORTHO05D006136 4.3e-52 208.8 176 65.9
CARHR196370 Cardamine hirsuta HOM05D005180 ORTHO05D006136 5.6e-52 208.4 191 59.7
FAN15G0398 Fragaria x ananassa HOM05D005180 ORTHO05D006136 5.6e-52 208.4 192 59.9
THA.LOC104820896 Tarenaya hassleriana HOM05D005180 ORTHO05D006136 9.5e-52 207.6 191 59.2
Os05g0569800 Oryza sativa ssp. japonica HOM05D005180 ORTHO05D006136 2.8e-51 206.1 189 60.3
AT5G16790 Arabidopsis thaliana HOM05D005180 ORTHO05D006136 4.7e-51 205.3 191 60.2
AL6G27810 Arabidopsis lyrata HOM05D005180 ORTHO05D006136 1.0e-50 204.1 191 59.7
Zm00001eb001480 Zea mays HOM05D005180 ORTHO05D006136 1.8e-50 203.4 189 58.7
Ah.04g161260 Amaranthus hybridus HOM05D005180 ORTHO05D006136 3.1e-50 202.6 191 58.1
EL10Ac6g14989 Beta vulgaris HOM05D005180 ORTHO05D006136 4.0e-50 202.2 191 58.1
Thhalv10021437m.g Eutrema salsugineum HOM05D005180 ORTHO05D006136 5.2e-50 201.8 188 58.5
Carub.0003s0208 Capsella rubella HOM05D005180 ORTHO05D006136 6.8e-50 201.4 189 58.2
AL3G12410 Arabidopsis lyrata HOM05D005180 ORTHO05D006136 2.0e-49 199.9 189 57.7
AT3G02950 Arabidopsis thaliana HOM05D005180 ORTHO05D006136 3.4e-49 199.1 189 57.1
C05p63850 Brassica napus HOM05D005180 ORTHO05D006136 3.4e-49 199.1 187 58.8
BolC5t35050H Brassica oleracea HOM05D005180 ORTHO05D006136 3.4e-49 199.1 187 58.8
CARHR076980 Cardamine hirsuta HOM05D005180 ORTHO05D006136 4.4e-49 198.7 189 57.7
CDE11G0176 Ceratophyllum demersum HOM05D005180 ORTHO05D006136 7.5e-49 198.0 178 60.7
Aa31LG5G13450 Aethionema arabicum HOM05D005180 ORTHO05D006136 1.3e-48 197.2 191 56.0
A05p44170 Brassica napus HOM05D005180 ORTHO05D006136 1.3e-48 197.2 187 58.3
BraSC90t46693Z Brassica rapa HOM05D005180 ORTHO05D006136 1.3e-48 197.2 187 58.3
AUR62005241 Chenopodium quinoa HOM05D005180 ORTHO05D006136 1.7e-48 196.8 191 56.5
Potri.013G082900 Populus trichocarpa HOM05D005180 ORTHO05D006136 1.7e-48 196.8 182 59.9
Sp3g02010 Schrenkiella parvula HOM05D005180 ORTHO05D006136 1.4e-47 193.7 188 56.9
AUR62000723 Chenopodium quinoa HOM05D005180 ORTHO05D006136 3.2e-47 192.6 191 55.5
Prupe.8G026900 Prunus persica HOM05D005180 ORTHO05D006136 1.0e-45 187.6 164 62.2
Hund05844 Selenicereus undatus HOM05D005180 ORTHO05D006136 3.0e-45 186.0 191 55.5
Cpa.g.sc14.58 Carica papaya HOM05D005180 ORTHO05D006136 9.5e-44 181.0 169 60.4
MD05G1022700 Malus domestica HOM05D005180 ORTHO05D006136 4.0e-42 175.6 140 66.4
SHI53994 Sapria himalayana HOM05D005180 ORTHO05D006136 2.3e-37 159.8 166 53.0
Carub.0006s1501 Capsella rubella HOM05D005180 ORTHO05D006136 3.4e-33 146.0 142 57.7
MD05G1023000 Malus domestica HOM05D005180 ORTHO05D006136 2.7e-30 136.3 164 51.2
CBR_g51237 Chara braunii HOM05D005180 ORTHO05D006136 1.5e-28 130.6 174 47.1
CBR_g4125 Chara braunii HOM05D005180 ORTHO05D006136 1.8e-26 123.6 139 50.4
SHI47254 Sapria himalayana HOM05D005180 ORTHO05D006136 4.6e-22 109.0 91 60.4
MCO09G003 Micromonas commoda HOM05D005180 ORTHO05D006136 2.1e-19 100.1 182 36.3
MD00G1125800 Malus domestica HOM05D005180 ORTHO05D006136 3.6e-19 99.4 119 47.9
Solyc11g072180.3 Solanum lycopersicum HOM05D005180 ORTHO05D006136 6.4e-16 88.6 52 84.6
Prupe.8G027200 Prunus persica HOM05D005180 ORTHO05D006136 3.5e-14 82.8 97 46.4
FvH4_4g00100 Fragaria vesca HOM05D005180 ORTHO05D006136 5.6e-12 75.5 52 71.2
Cre03.g182350 Chlamydomonas reinhardtii HOM05D005180 ORTHO05D006136 1.6e-11 73.9 136 34.6
Glyma.07G081200 Glycine max HOM05D005180 ORTHO05D006136 6.9e-10 68.6 91 41.8
Prupe.8G026600 Prunus persica HOM05D005180 ORTHO05D006136 1.5e-09 67.4 55 52.7
PRCOL_00001653 Prasinoderma coloniale HOM05D005180 ORTHO05D006136 5.8e-09 65.5 177 27.7


User provided reference genes

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