Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37294 Sequoiadendron giganteum HOM05D000112 ORTHO05D385950 2.5e-39 164.9 76 100.0
SEGI_40840 Sequoiadendron giganteum HOM05D000112 ORTHO05D000564 6.6e-08 60.5 27 96.3
SEGI_22520 Sequoiadendron giganteum HOM05D000112 ORTHO05D000564 1.1e-07 59.7 27 92.6
MBI19_g32764_MAGBIO Magnolia biondii HOM05D000112 ORTHO05D000564 2.5e-07 58.5 27 88.9
Actinidia08905 Actinidia chinensis HOM05D000112 ORTHO05D000564 3.3e-07 58.2 30 80.0
CDE02G2098 Ceratophyllum demersum HOM05D000112 ORTHO05D000564 3.3e-07 58.2 27 85.2
Rhsim08G0196200 Rhododendron simsii HOM05D000112 ORTHO05D000564 4.3e-07 57.8 42 59.5
SEGI_09939 Sequoiadendron giganteum HOM05D000112 ORTHO05D000564 4.3e-07 57.8 27 92.6
ATR0706G048 Amborella trichopoda HOM05D000112 ORTHO05D000564 5.6e-07 57.4 27 85.2
DCAR_016351 Daucus carota HOM05D000112 ORTHO05D000564 5.6e-07 57.4 30 80.0
FAN08G1299 Fragaria x ananassa HOM05D000112 ORTHO05D000564 5.6e-07 57.4 27 88.9
SalBow7G3518 Salvia bowleyana HOM05D000112 ORTHO05D000564 5.6e-07 57.4 27 88.9
Os11g0523800 Oryza sativa ssp. japonica HOM05D000112 ORTHO05D000564 7.3e-07 57.0 27 85.2
SEGI_07221 Sequoiadendron giganteum HOM05D000112 ORTHO05D000564 7.3e-07 57.0 27 85.2
TAR371G0700 Trochodendron aralioides HOM05D000112 ORTHO05D000564 7.3e-07 57.0 27 88.9
vmacro19170 Vaccinium macrocarpon HOM05D000112 ORTHO05D000564 7.3e-07 57.0 42 59.5
BcaB02g09613 Brassica carinata HOM05D000112 ORTHO05D000564 9.6e-07 56.6 27 88.9
A06p28710 Brassica napus HOM05D000112 ORTHO05D000564 9.6e-07 56.6 27 88.9
C03p65050 Brassica napus HOM05D000112 ORTHO05D000564 9.6e-07 56.6 27 88.9
BolC3t18763H Brassica oleracea HOM05D000112 ORTHO05D000564 9.6e-07 56.6 27 88.9
BraA06t25811Z Brassica rapa HOM05D000112 ORTHO05D000564 9.6e-07 56.6 27 88.9
Os01g0927600 Oryza sativa ssp. japonica HOM05D000112 ORTHO05D000564 9.6e-07 56.6 27 85.2
Os12g0479400 Oryza sativa ssp. japonica HOM05D000112 ORTHO05D000564 9.6e-07 56.6 27 85.2
Aqoxy2G03132 Aquilegia oxysepala HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 81.5
AL8G38770 Arabidopsis lyrata HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
AT5G62000 Arabidopsis thaliana HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
arahy.Tifrunner.gnm1.ann1.EBLC22 Arachis hypogaea HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
arahy.Tifrunner.gnm1.ann1.X40XE7 Arachis hypogaea HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
BcaC03g18114 Brassica carinata HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
BcaC04g23432 Brassica carinata HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
BcaNung01414 Brassica carinata HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
A09p07480 Brassica napus HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
C02p61820 Brassica napus HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
C09p08400 Brassica napus HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
BolC9t53750H Brassica oleracea HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
BraA02t09124Z Brassica rapa HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
BraA09t36402Z Brassica rapa HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
Carub.0008s2269 Capsella rubella HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
Ca_17586_v3 Cicer arietinum L. HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
Thhalv10003641m.g Eutrema salsugineum HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
Glyma.08G008100 Glycine max HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
Lj5C88G6 Lonicera japonica HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 85.2
Nitab4.5_0009686g0010 Nicotiana tabacum HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
Prupe.5G143100 Prunus persica HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
SHI14177 Sapria himalayana HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
Sp2g25180 Schrenkiella parvula HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
Solyc12g042070.3 Solanum lycopersicum HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
Sopen12g021160 Solanum pennellii HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
PGSC0003DMG400014452 Solanum tuberosum HOM05D000112 ORTHO05D000564 1.2e-06 56.2 27 88.9
BolC6t38558H Brassica oleracea HOM05D000112 ORTHO05D012475 1.6e-06 55.8 45 57.8
Cpa.g.sc108.15 Carica papaya HOM05D000112 ORTHO05D001327 1.6e-06 55.8 35 60.0
Zm00001eb170540 Zea mays HOM05D000112 ORTHO05D000564 1.6e-06 55.8 27 81.5
Zm00001eb363810 Zea mays HOM05D000112 ORTHO05D000564 1.6e-06 55.8 27 85.2
ATR0582G007 Amborella trichopoda HOM05D000112 ORTHO05D000564 2.1e-06 55.5 27 81.5
arahy.Tifrunner.gnm1.ann1.9IQ583 Arachis hypogaea HOM05D000112 ORTHO05D000564 2.1e-06 55.5 30 80.0
arahy.Tifrunner.gnm1.ann1.TQL4XD Arachis hypogaea HOM05D000112 ORTHO05D000564 2.1e-06 55.5 30 80.0
CDE06G2409 Ceratophyllum demersum HOM05D000112 ORTHO05D000564 2.1e-06 55.5 27 85.2
Dinv13733 Davidia involucrata HOM05D000112 ORTHO05D000564 2.1e-06 55.5 27 85.2
Hma1.2p1_2656F.1_g326320 Hydrangea macrophylla HOM05D000112 ORTHO05D001327 2.1e-06 55.5 59 44.1
Lsat_1_v5_gn_1_32200 Lactuca sativa HOM05D000112 ORTHO05D000564 2.1e-06 55.5 27 85.2
Nn3g16295 Nelumbo nucifera HOM05D000112 ORTHO05D000564 2.1e-06 55.5 27 85.2
Nn4g22158 Nelumbo nucifera HOM05D000112 ORTHO05D000564 2.1e-06 55.5 27 85.2
Oeu013657.2 Olea europaea HOM05D000112 ORTHO05D000564 2.1e-06 55.5 27 85.2
PGR102G1760 Punica granatum HOM05D000112 ORTHO05D000564 2.1e-06 55.5 27 85.2
TAR622G0979 Trochodendron aralioides HOM05D000112 ORTHO05D000564 2.1e-06 55.5 27 85.2
TAR629G2310 Trochodendron aralioides HOM05D000112 ORTHO05D000564 2.1e-06 55.5 27 85.2
Aa31LG11G1520 Aethionema arabicum HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
BcaB02g09612 Brassica carinata HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
BcaB07g29805 Brassica carinata HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
Cfa009440 Carpinus fangiana HOM05D000112 ORTHO05D000564 2.8e-06 55.1 36 66.7
ECA246G1569 Erigeron canadensis HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
Glyma.04G200600 Glycine max HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
Glyma.06G164900 Glycine max HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
HanXRQChr17g0548581 Helianthus annuus HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
Lsat_1_v5_gn_5_9980 Lactuca sativa HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
Lj9C485G17 Lonicera japonica HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
Lj4g0018984 Lotus japonicus HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
MD06G1132100 Malus domestica HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
Oeu004292.1 Olea europaea HOM05D000112 ORTHO05D001327 2.8e-06 55.1 32 68.8
PSO210G6193 Papaver somniferum HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 81.5
PSO572G0002 Papaver somniferum HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 81.5
PSO832G0609 Papaver somniferum HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 81.5
PSO832G2298 Papaver somniferum HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 81.5
Potri.012G106100 Populus trichocarpa HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
Hund10047 Selenicereus undatus HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
SEGI_08387 Sequoiadendron giganteum HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
SEGI_21707 Sequoiadendron giganteum HOM05D000112 ORTHO05D000564 2.8e-06 55.1 27 85.2
Atru.chr6.1904 Acer truncatum HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
MSTRG.4640 Avicennia marina HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
EL10Ac5g11300 Beta vulgaris HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
BolC2t12237H Brassica oleracea HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
CSS0023669 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
CANSAT56G2993 Cannabis sativa HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
CAN.G843.19 Capsicum annuum HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
CARHR275800 Cardamine hirsuta HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Cfa018717 Carpinus fangiana HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Cc00_g12260 Coffea canephora HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
COL.COLO4_37241 Corchorus olitorius HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
MELO3C026161.2 Cucumis melo HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
CsaV3_1G000090 Cucumis sativus L. HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Dinv23214 Davidia involucrata HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Duzib205G2058 Durio zibethinus HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Duzib248G0898 Durio zibethinus HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Migut.D01190 Erythranthe guttata HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Migut.I00613 Erythranthe guttata HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
FvH4_5g09310 Fragaria vesca HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
FAN04G2810 Fragaria x ananassa HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
FAN13G1223 Fragaria x ananassa HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Gohir.A07G047300 Gossypium hirsutum HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Gohir.D07G051500 Gossypium hirsutum HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Gohir.D12G195600 Gossypium hirsutum HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Gorai.001G054600 Gossypium raimondii HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Gorai.008G210200 Gossypium raimondii HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
HanXRQChr05g0152981 Helianthus annuus HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Lalb_Chr08g0237501 Lupinus albus HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 81.5
MD14G1148500 Malus domestica HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Medtr8g100050 Medicago truncatula HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Nitab4.5_0000663g0220 Nicotiana tabacum HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Nitab4.5_0003119g0050 Nicotiana tabacum HOM05D000112 ORTHO05D000564 3.6e-06 54.7 34 70.6
Oeu017195.1 Olea europaea HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Peaxi162Scf00314g00539 Petunia axillaris HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Peaxi162Scf01168g00016 Petunia axillaris HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Phvul.002G282200 Phaseolus vulgaris HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Psat7g038760 Pisum sativum HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Potri.015G105300 Populus trichocarpa HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
QL10p000789 Quercus lobata HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
RcHm_v2.0_Chr7g0188911 Rosa chinensis HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Sabra15G0125500 Salix brachista HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
SalBow1G4443 Salvia bowleyana HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Sed0027970 Sechium edule HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Hund02501 Selenicereus undatus HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Sc04g0000240 Simmondsia chinensis HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Solyc03g118290.3 Solanum lycopersicum HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Sopen03g037200 Solanum pennellii HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
PGSC0003DMG400014179 Solanum tuberosum HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
SGA_v2.0_scaffold143G35742 Striga asiatica HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
THA.LOC104819425 Tarenaya hassleriana HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Thecc.02G194100 Theobroma cacao HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Thecc.03G139100 Theobroma cacao HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
VMungo0251G2726 Vigna mungo HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
GSVIVG01004942001 Vitis vinifera HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
GSVIVG01008639001 Vitis vinifera HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 85.2
Zm00001eb142540 Zea mays HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 81.5
Zm00001eb408800 Zea mays HOM05D000112 ORTHO05D000564 3.6e-06 54.7 27 81.5
Aqoxy5G03168 Aquilegia oxysepala HOM05D000112 ORTHO05D000564 4.7e-06 54.3 27 81.5
EL10Ac4g08899 Beta vulgaris HOM05D000112 ORTHO05D001327 4.7e-06 54.3 27 77.8
CSS0034857 Camellia sinensis var. sinensis HOM05D000112 ORTHO05D000564 4.7e-06 54.3 27 81.5
CDE02G2022 Ceratophyllum demersum HOM05D000112 ORTHO05D000564 4.7e-06 54.3 27 77.8
CDE09G1370 Ceratophyllum demersum HOM05D000112 ORTHO05D000564 4.7e-06 54.3 27 77.8
ECA247G2487 Erigeron canadensis HOM05D000112 ORTHO05D000564 4.7e-06 54.3 27 81.5
FAN18G4279 Fragaria x ananassa HOM05D000112 ORTHO05D000564 4.7e-06 54.3 27 81.5
Manes.06G126000 Manihot esculenta HOM05D000112 ORTHO05D000564 4.7e-06 54.3 27 81.5
PSO017G3230 Papaver somniferum HOM05D000112 ORTHO05D000564 4.7e-06 54.3 27 81.5
PSO478G4419 Papaver somniferum HOM05D000112 ORTHO05D000564 4.7e-06 54.3 27 81.5
Sabra12G0078400 Salix brachista HOM05D000112 ORTHO05D000564 4.7e-06 54.3 27 85.2
THA.LOC104801816 Tarenaya hassleriana HOM05D000112 ORTHO05D000564 4.7e-06 54.3 27 85.2
PSO017G4814 Papaver somniferum HOM05D000112 ORTHO05D000564 6.2e-06 53.9 27 81.5
PSO478G3516 Papaver somniferum HOM05D000112 ORTHO05D000564 6.2e-06 53.9 27 81.5
Peaxi162Scf00074g00537 Petunia axillaris HOM05D000112 ORTHO05D000564 6.2e-06 53.9 27 81.5
THA.LOC104822167 Tarenaya hassleriana HOM05D000112 ORTHO05D001327 6.2e-06 53.9 26 80.8
TAR362G1039 Trochodendron aralioides HOM05D000112 ORTHO05D000564 6.2e-06 53.9 27 74.1
Ah.11g046800 Amaranthus hybridus HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 81.5
ATR0602G278 Amborella trichopoda HOM05D000112 ORTHO05D000564 8.1e-06 53.5 26 80.8
MSTRG.22852 Avicennia marina HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 81.5
A05p18170 Brassica napus HOM05D000112 ORTHO05D012475 8.1e-06 53.5 27 85.2
BraA04t17115Z Brassica rapa HOM05D000112 ORTHO05D012475 8.1e-06 53.5 27 85.2
ClCG01G024910 Citrullus lanatus HOM05D000112 ORTHO05D001327 8.1e-06 53.5 31 64.5
Haze_07110 Corylus avellana HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 81.5
DCAR_025655 Daucus carota HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 81.5
Eucgr.B03551 Eucalyptus grandis HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 81.5
Glyma.05G200800 Glycine max HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 81.5
Manes.14G045500 Manihot esculenta HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 81.5
Oeu005578.1 Olea europaea HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 85.2
TWI23G1013 Tripterygium wilfordii HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 85.2
TWI39G0866 Tripterygium wilfordii HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 81.5
HPP92_007048 Vanilla planifolia HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 77.8
HPP92_011739 Vanilla planifolia HOM05D000112 ORTHO05D000564 8.1e-06 53.5 25 84.0
GSVIVG01011008001 Vitis vinifera HOM05D000112 ORTHO05D000564 8.1e-06 53.5 27 77.8


User provided reference genes

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