Gene: ATR0602G278

General Information

Structural Information

  • Species Amborella trichopoda
  • Gene Identifier ATR0602G278
  • Transcript Identifier ATR0602G278.1
  • Gene Type Coding gene
  • Location AmTr_v1.0_scaffold00021 : 4517273-4524147 : positive

Gene Family Information

  • ID HOM05D000112
  • #Genes/#Species 3032/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id evm_27.TU.AmTr_v1.0_scaffold00021.210.v1.0
  • pacid 31563445

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009725
IEA
InterProresponse to hormone
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT1G59750
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT1G59750
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G59750

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G61830
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G59750
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G61830
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G61830

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G46530

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR003340 B3 DNA binding domain
IPR015300 DNA-binding pseudobarrel domain superfamily
IPR033389 AUX/IAA domain
IPR010525 Auxin response factor domain
IPR044835 Auxin response factor
Mapman id Description
15.5.5.1 RNA biosynthesis.transcriptional regulation.B3 transcription factor superfamily.transcription factor (ARF)