Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37134 Sequoiadendron giganteum HOM05D005655 ORTHO05D007386 2.0e-160 568.9 268 100.0
MELO3C019957.2 Cucumis melo HOM05D005655 ORTHO05D007386 6.6e-10 68.9 40 67.5
CsaV3_6G004840 Cucumis sativus L. HOM05D005655 ORTHO05D007386 6.6e-10 68.9 40 67.5
ClCG08G007170 Citrullus lanatus HOM05D005655 ORTHO05D007386 8.6e-10 68.6 40 70.0
Nn5g28881 Nelumbo nucifera HOM05D005655 ORTHO05D007386 1.9e-09 67.4 41 65.9
MSTRG.22119 Avicennia marina HOM05D005655 ORTHO05D007386 2.5e-09 67.0 53 56.6
Lalb_Chr02g0141641 Lupinus albus HOM05D005655 ORTHO05D007386 4.3e-09 66.2 84 42.9
Zm00001eb018490 Zea mays HOM05D005655 ORTHO05D007386 4.3e-09 66.2 40 67.5
Glyma.10G220000 Glycine max HOM05D005655 ORTHO05D007386 7.3e-09 65.5 40 70.0
Ah.02g115760 Amaranthus hybridus HOM05D005655 ORTHO05D007386 9.5e-09 65.1 41 68.3
Cfa018255 Carpinus fangiana HOM05D005655 ORTHO05D007386 9.5e-09 65.1 104 36.5
Os03g0381100 Oryza sativa ssp. japonica HOM05D005655 ORTHO05D007386 9.5e-09 65.1 40 67.5
arahy.Tifrunner.gnm1.ann1.3U6NKV Arachis hypogaea HOM05D005655 ORTHO05D007386 1.2e-08 64.7 55 50.9
arahy.Tifrunner.gnm1.ann1.A75B0U Arachis hypogaea HOM05D005655 ORTHO05D007386 1.6e-08 64.3 55 50.9
Rhsim06G0093900 Rhododendron simsii HOM05D005655 ORTHO05D007386 1.6e-08 64.3 109 36.7
SalBow6G4612 Salvia bowleyana HOM05D005655 ORTHO05D007386 1.6e-08 64.3 43 62.8
HPP92_016852 Vanilla planifolia HOM05D005655 ORTHO05D007386 1.6e-08 64.3 40 67.5
HPP92_027830 Vanilla planifolia HOM05D005655 ORTHO05D007386 1.6e-08 64.3 40 67.5
Atru.chr13.1965 Acer truncatum HOM05D005655 ORTHO05D007386 2.1e-08 63.9 38 71.1
MD05G1036800 Malus domestica HOM05D005655 ORTHO05D007386 2.1e-08 63.9 40 65.0
Medtr1g097390 Medicago truncatula HOM05D005655 ORTHO05D007386 2.1e-08 63.9 40 67.5
COL.COLO4_13720 Corchorus olitorius HOM05D005655 ORTHO05D007386 2.8e-08 63.5 40 65.0
Lsat_1_v5_gn_1_5920 Lactuca sativa HOM05D005655 ORTHO05D007386 2.8e-08 63.5 42 66.7
Lj5g0012902 Lotus japonicus HOM05D005655 ORTHO05D007386 2.8e-08 63.5 40 65.0
Sc13g0008190 Simmondsia chinensis HOM05D005655 ORTHO05D007386 2.8e-08 63.5 46 67.4
Duzib093G0465 Durio zibethinus HOM05D005655 ORTHO05D007386 3.6e-08 63.2 40 65.0
Gorai.005G076300 Gossypium raimondii HOM05D005655 ORTHO05D007386 3.6e-08 63.2 73 43.8
Manes.02G186000 Manihot esculenta HOM05D005655 ORTHO05D007386 3.6e-08 63.2 44 61.4
Ciclev10001190m.g Citrus clementina HOM05D005655 ORTHO05D007386 4.7e-08 62.8 41 61.0
Potri.002G061650 Populus trichocarpa HOM05D005655 ORTHO05D007386 4.7e-08 62.8 44 61.4
RcHm_v2.0_Chr6g0273621 Rosa chinensis HOM05D005655 ORTHO05D007386 4.7e-08 62.8 44 59.1
Dinv41018 Davidia involucrata HOM05D005655 ORTHO05D007386 6.1e-08 62.4 41 61.0
Glyma.20G171700 Glycine max HOM05D005655 ORTHO05D007386 8.0e-08 62.0 40 65.0
Gohir.A02G061800 Gossypium hirsutum HOM05D005655 ORTHO05D007386 8.0e-08 62.0 40 62.5
Gohir.D02G067400 Gossypium hirsutum HOM05D005655 ORTHO05D007386 8.0e-08 62.0 73 42.5
Phvul.007G085300 Phaseolus vulgaris HOM05D005655 ORTHO05D007386 8.0e-08 62.0 44 61.4
QL02p036335 Quercus lobata HOM05D005655 ORTHO05D007386 8.0e-08 62.0 41 65.9
Hund26667 Selenicereus undatus HOM05D005655 ORTHO05D007386 8.0e-08 62.0 44 56.8
TPR.G23158 Trifolium pratense HOM05D005655 ORTHO05D007386 8.0e-08 62.0 40 62.5
GSVIVG01013676001 Vitis vinifera HOM05D005655 ORTHO05D007386 8.0e-08 62.0 41 58.5
AUR62022311 Chenopodium quinoa HOM05D005655 ORTHO05D007386 1.0e-07 61.6 38 68.4
EL10Ac1g01637 Beta vulgaris HOM05D005655 ORTHO05D007386 1.4e-07 61.2 41 63.4
CDE09G0968 Ceratophyllum demersum HOM05D005655 ORTHO05D007386 1.4e-07 61.2 46 60.9
FvH4_2g12780 Fragaria vesca HOM05D005655 ORTHO05D007386 1.8e-07 60.8 44 54.5
PGR042G2919 Punica granatum HOM05D005655 ORTHO05D007386 1.8e-07 60.8 41 56.1
CAN.G564.32 Capsicum annuum HOM05D005655 ORTHO05D007386 2.3e-07 60.5 41 61.0
Thecc.10G182000 Theobroma cacao HOM05D005655 ORTHO05D007386 2.3e-07 60.5 87 37.9
Cc10_g06370 Coffea canephora HOM05D005655 ORTHO05D007386 3.1e-07 60.1 35 71.4
Eucgr.F02671 Eucalyptus grandis HOM05D005655 ORTHO05D007386 3.1e-07 60.1 40 60.0
Eucgr.I00104 Eucalyptus grandis HOM05D005655 ORTHO05D007386 3.1e-07 60.1 40 60.0
HanXRQChr04g0115611 Helianthus annuus HOM05D005655 ORTHO05D007386 3.1e-07 60.1 42 61.9
Prupe.8G045000 Prunus persica HOM05D005655 ORTHO05D007386 3.1e-07 60.1 86 38.4
Solyc04g072140.4 Solanum lycopersicum HOM05D005655 ORTHO05D007386 3.1e-07 60.1 41 61.0
Sopen04g028310 Solanum pennellii HOM05D005655 ORTHO05D007386 3.1e-07 60.1 41 61.0
CSS0015534 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 4.0e-07 59.7 43 60.5
Hma1.2p1_0358F.1_g134900 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 4.0e-07 59.7 42 59.5
Hma1.2p1_0358F.1_g134910 Hydrangea macrophylla HOM05D005655 ORTHO05D007386 4.0e-07 59.7 42 59.5
MBI05_g00396_MAGBIO Magnolia biondii HOM05D001233 ORTHO05D001233 4.0e-07 59.7 44 56.8
Sabra02G0049900 Salix brachista HOM05D005655 ORTHO05D007386 4.0e-07 59.7 38 68.4
Sed0016594 Sechium edule HOM05D005655 ORTHO05D007386 4.0e-07 59.7 38 60.5
CSS0031675 Camellia sinensis var. sinensis HOM05D005655 ORTHO05D007386 5.2e-07 59.3 43 60.5
AUR62034929 Chenopodium quinoa HOM05D005655 ORTHO05D007386 5.2e-07 59.3 38 65.8
Ca_10644_v3 Cicer arietinum L. HOM05D005655 ORTHO05D007386 5.2e-07 59.3 52 51.9
PGSC0003DMG400031154 Solanum tuberosum HOM05D005655 ORTHO05D007386 5.2e-07 59.3 41 58.5
THA.LOC104816107 Tarenaya hassleriana HOM05D005655 ORTHO05D007386 5.2e-07 59.3 35 68.6
C06p11890 Brassica napus HOM05D005655 ORTHO05D000003 6.8e-07 58.9 35 71.4
BcaB07g33038 Brassica carinata HOM05D005655 ORTHO05D007386 8.9e-07 58.5 35 71.4
BcaC08g43808 Brassica carinata HOM05D005655 ORTHO05D007386 8.9e-07 58.5 35 71.4
A09p32350 Brassica napus HOM05D005655 ORTHO05D000003 8.9e-07 58.5 35 71.4
BolC6t36321H Brassica oleracea HOM05D005655 ORTHO05D000003 8.9e-07 58.5 35 71.4
CANSAT25G2324 Cannabis sativa HOM05D005655 ORTHO05D007386 8.9e-07 58.5 32 75.0
Sp1g29390 Schrenkiella parvula HOM05D005655 ORTHO05D007386 8.9e-07 58.5 35 71.4
SGA_v2.0_scaffold371G50147 Striga asiatica HOM05D005655 ORTHO05D007386 8.9e-07 58.5 38 65.8
TAR625G0054 Trochodendron aralioides HOM05D005655 ORTHO05D007386 8.9e-07 58.5 35 68.6
unitig_21.g20592 Utricularia gibba HOM05D005655 ORTHO05D007386 8.9e-07 58.5 38 63.2
AL1G48650 Arabidopsis lyrata HOM05D005655 ORTHO05D007386 1.2e-06 58.2 35 71.4
AT1G34150 Arabidopsis thaliana HOM05D005655 ORTHO05D007386 1.2e-06 58.2 35 71.4
Carub.0001s3222 Capsella rubella HOM05D005655 ORTHO05D007386 1.2e-06 58.2 35 71.4
Eucgr.J00222 Eucalyptus grandis HOM05D005655 ORTHO05D007386 1.2e-06 58.2 35 65.7
Aqoxy5G02015 Aquilegia oxysepala HOM05D005655 ORTHO05D007386 1.5e-06 57.8 52 51.9
CARHR033660 Cardamine hirsuta HOM05D005655 ORTHO05D007386 1.5e-06 57.8 35 71.4
Thhalv10007608m.g Eutrema salsugineum HOM05D005655 ORTHO05D007386 1.5e-06 57.8 35 65.7
Nitab4.5_0000433g0050 Nicotiana tabacum HOM05D005655 ORTHO05D007386 1.5e-06 57.8 35 68.6
Nitab4.5_0001000g0130 Nicotiana tabacum HOM05D005655 ORTHO05D007386 1.5e-06 57.8 35 68.6
TWI74G0660 Tripterygium wilfordii HOM05D005655 ORTHO05D007386 1.5e-06 57.8 41 56.1
Actinidia17755 Actinidia chinensis HOM05D005655 ORTHO05D007386 2.0e-06 57.4 35 62.9
Migut.N02937 Erythranthe guttata HOM05D005655 ORTHO05D007386 2.0e-06 57.4 87 40.2
Eucgr.F00074 Eucalyptus grandis HOM05D005655 ORTHO05D007386 2.0e-06 57.4 34 67.6
ATR0564G440 Amborella trichopoda HOM05D005655 ORTHO05D007386 3.4e-06 56.6 35 65.7
Cpa.g.sc26.127 Carica papaya HOM05D005655 ORTHO05D007386 5.8e-06 55.8 29 75.9
Eucgr.L00427 Eucalyptus grandis HOM05D005655 ORTHO05D007386 5.8e-06 55.8 34 64.7
SHI09122 Sapria himalayana HOM05D005655 ORTHO05D007386 5.8e-06 55.8 32 71.9


User provided reference genes

Program Settings