Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36736 Sequoiadendron giganteum HOM05D006564 ORTHO05D007772 5.6e-104 380.9 192 100.0
Nitab4.5_0003128g0060 Nicotiana tabacum HOM05D006564 ORTHO05D007772 3.0e-17 92.8 139 37.4
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 2.6e-16 89.7 105 44.8
Lj3A1053T43 Lonicera japonica HOM05D006564 ORTHO05D007772 3.4e-16 89.4 93 41.9
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 1.7e-15 87.0 133 37.6
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 2.8e-15 86.3 102 38.2
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 2.8e-15 86.3 111 36.9
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 4.9e-15 85.5 127 37.0
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 8.3e-15 84.7 144 33.3
PGSC0003DMG401026086 Solanum tuberosum HOM05D006564 ORTHO05D007772 8.3e-15 84.7 98 40.8
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 1.1e-14 84.3 153 32.7
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 1.4e-14 84.0 133 34.6
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 1.8e-14 83.6 107 40.2
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 2.4e-14 83.2 133 34.6
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 3.1e-14 82.8 125 37.6
Lalb_Chr05g0216811 Lupinus albus HOM05D006564 ORTHO05D007772 4.1e-14 82.4 102 38.2
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 5.4e-14 82.0 113 38.1
Phvul.002G070600 Phaseolus vulgaris HOM05D006564 ORTHO05D007772 5.4e-14 82.0 91 38.5
Cfa009164 Carpinus fangiana HOM05D006564 ORTHO05D007772 9.2e-14 81.3 120 35.0
FAN12G0482 Fragaria x ananassa HOM05D006564 ORTHO05D007772 9.2e-14 81.3 95 42.1
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 1.2e-13 80.9 143 33.6
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 1.2e-13 80.9 123 36.6
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 1.2e-13 80.9 93 37.6
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 1.2e-13 80.9 124 36.3
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 1.6e-13 80.5 121 34.7
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 2.0e-13 80.1 99 41.4
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 2.7e-13 79.7 99 40.4
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 2.7e-13 79.7 122 37.7
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 3.5e-13 79.3 132 33.3
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 4.5e-13 79.0 102 38.2
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 4.5e-13 79.0 134 35.1
Hund06003 Selenicereus undatus HOM05D006564 ORTHO05D007772 4.5e-13 79.0 143 35.0
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 5.9e-13 78.6 124 37.1
RcHm_v2.0_Chr4g0443681 Rosa chinensis HOM05D006564 ORTHO05D007772 5.9e-13 78.6 95 40.0
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 7.8e-13 78.2 121 33.1
Manes.13G029100 Manihot esculenta HOM05D006564 ORTHO05D007772 7.8e-13 78.2 139 33.8
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 7.8e-13 78.2 100 38.0
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 1.0e-12 77.8 127 36.2
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 1.7e-12 77.0 133 33.8
FAN22G1362 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.7e-12 77.0 124 36.3
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 1.7e-12 77.0 120 37.5
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 2.3e-12 76.6 124 37.1
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 2.9e-12 76.3 119 34.5
Lsat_1_v5_gn_4_5380 Lactuca sativa HOM05D006564 ORTHO05D007772 3.8e-12 75.9 124 37.9
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 5.0e-12 75.5 102 37.3
TAR374G1125 Trochodendron aralioides HOM05D006564 ORTHO05D007772 5.0e-12 75.5 111 36.9
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 6.6e-12 75.1 102 36.3
unitig_744.g23977 Utricularia gibba HOM05D006564 ORTHO05D007772 8.6e-12 74.7 96 42.7
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 1.1e-11 74.3 94 38.3
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 1.1e-11 74.3 93 38.7
ATR1091G047 Amborella trichopoda HOM05D006564 ORTHO05D007772 1.9e-11 73.6 94 43.6
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 1.9e-11 73.6 125 36.0
Ca_03150_v3 Cicer arietinum L. HOM05D006564 ORTHO05D007772 2.5e-11 73.2 121 34.7
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 2.5e-11 73.2 94 38.3
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 2.5e-11 73.2 95 35.8
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 3.3e-11 72.8 89 39.3
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 3.3e-11 72.8 93 36.6
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 4.3e-11 72.4 94 38.3
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 4.3e-11 72.4 131 35.9
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 5.6e-11 72.0 106 35.8
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 7.3e-11 71.6 91 36.3
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 1.6e-10 70.5 139 32.4
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 2.8e-10 69.7 140 32.9
Sabra10G0025500 Salix brachista HOM05D006564 ORTHO05D007772 3.6e-10 69.3 157 31.8
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 3.6e-10 69.3 135 31.1
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 4.7e-10 68.9 102 34.3
Eucgr.H02586 Eucalyptus grandis HOM05D006564 ORTHO05D007772 4.7e-10 68.9 127 33.9
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 6.1e-10 68.6 102 34.3
Actinidia01700 Actinidia chinensis HOM05D006564 ORTHO05D007772 8.0e-10 68.2 66 42.4
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 8.0e-10 68.2 111 33.3
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 1.0e-09 67.8 93 35.5
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 1.0e-09 67.8 93 35.5
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 1.4e-09 67.4 92 35.9
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 1.8e-09 67.0 101 35.6
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 2.3e-09 66.6 102 33.3
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 2.3e-09 66.6 102 34.3
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 4.0e-09 65.9 93 34.4
CBR_g8804 Chara braunii HOM05D006564 ORTHO05D007772 5.2e-09 65.5 70 42.9
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 5.2e-09 65.5 102 34.3
ClCG08G018020 Citrullus lanatus HOM05D006564 ORTHO05D007772 6.8e-09 65.1 107 31.8
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 6.8e-09 65.1 99 36.4
SHI17558 Sapria himalayana HOM05D006564 ORTHO05D007772 6.8e-09 65.1 71 39.4
CDE06G0043 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 8.9e-09 64.7 67 43.3
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 2.0e-08 63.5 137 33.6
Sc04g0009220 Simmondsia chinensis HOM05D006564 ORTHO05D007772 2.0e-08 63.5 127 31.5
CDE07G0681 Ceratophyllum demersum HOM05D006564 ORTHO05D007772 3.4e-08 62.8 93 37.6
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 5.8e-08 62.0 125 31.2
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 5.8e-08 62.0 122 30.3
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 7.5e-08 61.6 126 31.7
SEGI_39577 Sequoiadendron giganteum HOM05D002100 ORTHO05D002310 9.8e-08 61.2 49 59.2


User provided reference genes

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