Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36690 Sequoiadendron giganteum HOM05D007034 ORTHO05D008665 1.0e-119 433.3 208 100.0
FAN04G0206 Fragaria x ananassa HOM05D007034 ORTHO05D008665 5.4e-44 181.8 130 63.1
FAN08G2641 Fragaria x ananassa HOM05D007034 ORTHO05D008665 9.2e-44 181.0 129 63.6
QL10p035731 Quercus lobata HOM05D007034 ORTHO05D008665 2.7e-43 179.5 127 62.2
arahy.Tifrunner.gnm1.ann1.XWK03B Arachis hypogaea HOM05D007034 ORTHO05D008665 3.5e-43 179.1 127 61.4
RcHm_v2.0_Chr7g0188231 Rosa chinensis HOM05D007034 ORTHO05D008665 4.6e-43 178.7 129 63.6
CBR_g36305 Chara braunii HOM05D007034 ORTHO05D008665 7.8e-43 177.9 127 62.2
Ah.15g089920 Amaranthus hybridus HOM05D007034 ORTHO05D008665 1.3e-42 177.2 139 59.7
EL10Ac7g17117 Beta vulgaris HOM05D007034 ORTHO05D008665 1.3e-42 177.2 144 56.2
Cpa.g.sc13.204 Carica papaya HOM05D007034 ORTHO05D008665 2.3e-42 176.4 137 59.9
arahy.Tifrunner.gnm1.ann1.FYEN8G Arachis hypogaea HOM05D007034 ORTHO05D008665 3.0e-42 176.0 127 60.6
GSVIVG01014061001 Vitis vinifera HOM05D007034 ORTHO05D008665 3.0e-42 176.0 129 62.8
Haze_19381 Corylus avellana HOM05D007034 ORTHO05D008665 5.1e-42 175.3 129 60.5
FAN18G0345 Fragaria x ananassa HOM05D007034 ORTHO05D008665 5.1e-42 175.3 129 62.0
Medtr8g095490 Medicago truncatula HOM05D007034 ORTHO05D008665 5.1e-42 175.3 127 61.4
Nn3g16191 Nelumbo nucifera HOM05D007034 ORTHO05D008665 8.6e-42 174.5 129 60.5
Lj4g0024388 Lotus japonicus HOM05D007034 ORTHO05D008665 1.5e-41 173.7 127 60.6
Psat7g040600 Pisum sativum HOM05D007034 ORTHO05D008665 1.5e-41 173.7 127 60.6
Sabra12G0081400 Salix brachista HOM05D007034 ORTHO05D008665 2.5e-41 172.9 142 58.5
Sc10g0005150 Simmondsia chinensis HOM05D007034 ORTHO05D008665 2.5e-41 172.9 129 60.5
Ca_16833_v3 Cicer arietinum L. HOM05D007034 ORTHO05D008665 4.3e-41 172.2 127 60.6
PSO017G2510 Papaver somniferum HOM05D007034 ORTHO05D008665 7.3e-41 171.4 129 60.5
CANSAT56G2345 Cannabis sativa HOM05D007034 ORTHO05D008665 1.2e-40 170.6 129 62.0
Dinv13693 Davidia involucrata HOM05D007034 ORTHO05D008665 1.2e-40 170.6 129 58.9
AUR62029782 Chenopodium quinoa HOM05D007034 ORTHO05D008665 1.6e-40 170.2 129 61.2
Manes.06G128800 Manihot esculenta HOM05D007034 ORTHO05D008665 1.6e-40 170.2 129 59.7
TPR.G12786 Trifolium pratense HOM05D007034 ORTHO05D008665 1.6e-40 170.2 127 59.8
Ciclev10030559m.g Citrus clementina HOM05D007034 ORTHO05D008665 2.1e-40 169.9 129 61.2
Aa31LG3G18970 Aethionema arabicum HOM05D007034 ORTHO05D008665 3.6e-40 169.1 129 60.5
Prupe.5G138100 Prunus persica HOM05D007034 ORTHO05D008665 3.6e-40 169.1 129 58.9
TAR374G0491 Trochodendron aralioides HOM05D007034 ORTHO05D008665 3.6e-40 169.1 129 59.7
Eucgr.G00023 Eucalyptus grandis HOM05D007034 ORTHO05D008665 4.7e-40 168.7 144 52.8
Lalb_Chr07g0183941 Lupinus albus HOM05D007034 ORTHO05D008665 6.2e-40 168.3 127 59.8
PGSC0003DMG400014226 Solanum tuberosum HOM05D007034 ORTHO05D008665 1.1e-39 167.5 129 56.6
MD06G1128300 Malus domestica HOM05D007034 ORTHO05D008665 1.4e-39 167.2 129 59.7
AagrBONN_evm.TU.Sc2ySwM_340.151 Anthoceros agrestis HOM05D007034 ORTHO05D008665 1.8e-39 166.8 147 53.1
Peaxi162Scf00314g00825 Petunia axillaris HOM05D007034 ORTHO05D008665 1.8e-39 166.8 142 54.2
Duzib205G0091 Durio zibethinus HOM05D007034 ORTHO05D008665 3.1e-39 166.0 129 58.9
Gohir.D07G050000 Gossypium hirsutum HOM05D007034 ORTHO05D008665 3.1e-39 166.0 129 59.7
Glyma.08G005800 Glycine max HOM05D007034 ORTHO05D008665 5.2e-39 165.2 127 55.1
Phvul.002G279600 Phaseolus vulgaris HOM05D007034 ORTHO05D008665 5.2e-39 165.2 127 55.9
Gorai.001G053100 Gossypium raimondii HOM05D007034 ORTHO05D008665 6.8e-39 164.9 129 58.9
Oeu012864.4 Olea europaea HOM05D007034 ORTHO05D008665 8.9e-39 164.5 127 57.5
Thecc.03G143600 Theobroma cacao HOM05D007034 ORTHO05D008665 8.9e-39 164.5 129 58.1
Migut.I00651 Erythranthe guttata HOM05D007034 ORTHO05D008665 1.2e-38 164.1 127 55.9
Nitab4.5_0009037g0010 Nicotiana tabacum HOM05D007034 ORTHO05D008665 1.5e-38 163.7 129 55.0
Solyc03g117960.4 Solanum lycopersicum HOM05D007034 ORTHO05D008665 1.5e-38 163.7 129 55.0
Sopen03g036860 Solanum pennellii HOM05D007034 ORTHO05D008665 1.5e-38 163.7 129 55.0
Cc04_g05570 Coffea canephora HOM05D007034 ORTHO05D008665 2.0e-38 163.3 142 52.1
PGR042G1727 Punica granatum HOM05D007034 ORTHO05D008665 2.6e-38 162.9 129 55.0
Actinidia18277 Actinidia chinensis HOM05D007034 ORTHO05D008665 3.4e-38 162.5 127 58.3
Lj5C84G9 Lonicera japonica HOM05D007034 ORTHO05D008665 4.4e-38 162.2 141 54.6
Aqoxy5G02954 Aquilegia oxysepala HOM05D007034 ORTHO05D008665 5.8e-38 161.8 129 57.4
BcaB05g21618 Brassica carinata HOM05D007034 ORTHO05D008665 7.5e-38 161.4 129 57.4
CAN.G1008.36 Capsicum annuum HOM05D007034 ORTHO05D008665 9.9e-38 161.0 129 55.0
DCAR_025620 Daucus carota HOM05D007034 ORTHO05D008665 9.9e-38 161.0 153 51.6
THA.LOC104818293 Tarenaya hassleriana HOM05D007034 ORTHO05D008665 1.3e-37 160.6 129 54.3
Nitab4.5_0000976g0250 Nicotiana tabacum HOM05D007034 ORTHO05D008665 2.2e-37 159.8 129 54.3
C02p03100 Brassica napus HOM05D007034 ORTHO05D008665 2.9e-37 159.5 129 57.4
BraA02t04915Z Brassica rapa HOM05D007034 ORTHO05D008665 6.4e-37 158.3 129 56.6
PSO017G4759 Papaver somniferum HOM05D007034 ORTHO05D008665 6.4e-37 158.3 120 60.8
Thhalv10012509m.g Eutrema salsugineum HOM05D007034 ORTHO05D008665 8.3e-37 157.9 129 55.8
Sp6g35470 Schrenkiella parvula HOM05D007034 ORTHO05D008665 8.3e-37 157.9 129 56.6
AL6G17700 Arabidopsis lyrata HOM05D007034 ORTHO05D008665 1.1e-36 157.5 129 55.0
BcaB05g21619 Brassica carinata HOM05D007034 ORTHO05D008665 1.1e-36 157.5 129 56.6
BcaC03g13189 Brassica carinata HOM05D007034 ORTHO05D008665 1.1e-36 157.5 129 56.6
BolC2t06271H Brassica oleracea HOM05D007034 ORTHO05D008665 1.1e-36 157.5 129 56.6
CARHR205750 Cardamine hirsuta HOM05D007034 ORTHO05D008665 1.1e-36 157.5 129 56.6
Gohir.A07G045600 Gossypium hirsutum HOM05D007034 ORTHO05D008665 3.2e-36 156.0 129 57.4
Rhsim08G0200400 Rhododendron simsii HOM05D007034 ORTHO05D008665 3.2e-36 156.0 138 53.6
SalBow7G3686 Salvia bowleyana HOM05D007034 ORTHO05D008665 4.1e-36 155.6 134 53.0
SGA_v2.0_scaffold37G14662 Striga asiatica HOM05D007034 ORTHO05D008665 4.1e-36 155.6 131 54.2
Os04g0403400 Oryza sativa ssp. japonica HOM05D007034 ORTHO05D008665 9.2e-36 154.5 144 48.6
HPP92_006434 Vanilla planifolia HOM05D007034 ORTHO05D008665 9.2e-36 154.5 129 52.7
SMO139G0138 Selaginella moellendorffii HOM05D007034 ORTHO05D008665 2.7e-35 152.9 146 53.4
Carub.0006s0637 Capsella rubella HOM05D007034 ORTHO05D008665 3.5e-35 152.5 129 55.8
Zm00001eb084530 Zea mays HOM05D007034 ORTHO05D008665 4.6e-35 152.1 144 48.6
HanXRQChr05g0154511 Helianthus annuus HOM05D007034 ORTHO05D008665 1.3e-34 150.6 129 52.7
VMungo0251G1097 Vigna mungo HOM05D007034 ORTHO05D008665 5.1e-34 148.7 128 53.1
Atru.BG.50.p Acer truncatum HOM05D007034 ORTHO05D008665 6.6e-34 148.3 136 56.6
ECA246G4515 Erigeron canadensis HOM05D007034 ORTHO05D008665 6.6e-34 148.3 129 52.7
ATR0582G190 Amborella trichopoda HOM05D007034 ORTHO05D008665 1.5e-33 147.1 129 54.3
FvH4_5g10030 Fragaria vesca HOM05D007034 ORTHO05D008665 1.5e-33 147.1 129 56.6
Lsat_1_v5_gn_5_9280 Lactuca sativa HOM05D007034 ORTHO05D008665 2.1e-32 143.3 127 51.2
TWI23G0512 Tripterygium wilfordii HOM05D007034 ORTHO05D008665 1.4e-28 130.6 105 58.1
Potri.012G111800 Populus trichocarpa HOM05D007034 ORTHO05D008665 7.1e-28 128.3 105 59.0
MBI11_g45190_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 6.0e-27 125.2 97 60.8
MBI11_g13136_MAGBIO Magnolia biondii HOM05D007034 ORTHO05D008665 5.8e-22 108.6 129 44.2
Glyma.17G184700 Glycine max HOM05D007034 ORTHO05D006448 2.2e-21 106.7 74 56.8
Glyma.05G198600 Glycine max HOM05D007034 ORTHO05D008665 8.7e-18 94.7 102 44.1
Zm00001eb094900 Zea mays HOM05D000085 ORTHO05D014542 2.9e-13 79.7 71 49.3
SEGI_27708 Sequoiadendron giganteum HOM05D017626 ORTHO05D000002 6.4e-13 78.6 47 74.5
vmacro19093 Vaccinium macrocarpon HOM05D007034 ORTHO05D008665 6.4e-13 78.6 129 37.2
CSS0025577 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 1.9e-12 77.0 61 62.3
TAR622G0405 Trochodendron aralioides HOM05D001184 ORTHO05D007940 1.9e-12 77.0 124 37.9
CSS0045322 Camellia sinensis var. sinensis HOM05D007034 ORTHO05D008665 2.4e-12 76.6 61 62.3
SEGI_20098 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.4e-12 76.6 48 68.8
SEGI_07299 Sequoiadendron giganteum HOM05D003103 ORTHO05D003999 1.2e-11 74.3 46 71.7
SEGI_22826 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.6e-11 73.9 47 68.1
SEGI_26804 Sequoiadendron giganteum HOM05D000015 ORTHO05D000002 2.1e-11 73.6 47 70.2
SEGI_38451 Sequoiadendron giganteum HOM05D017626 ORTHO05D008665 3.5e-11 72.8 46 69.6
SEGI_19161 Sequoiadendron giganteum HOM05D009239 ORTHO05D014795 1.3e-10 70.9 45 71.1
SEGI_33040 Sequoiadendron giganteum HOM05D000004 ORTHO05D011908 1.8e-10 70.5 46 69.6
SEGI_29632 Sequoiadendron giganteum HOM05D004538 ORTHO05D006068 3.9e-10 69.3 46 69.6
SEGI_19741 Sequoiadendron giganteum HOM05D011934 ORTHO05D000002 6.7e-10 68.6 47 68.1
SEGI_06146 Sequoiadendron giganteum HOM05D002220 ORTHO05D008182 1.9e-09 67.0 39 71.8
SEGI_31853 Sequoiadendron giganteum HOM05D001398 ORTHO05D001467 1.9e-09 67.0 46 69.6
SEGI_32013 Sequoiadendron giganteum HOM05D017626 ORTHO05D008665 1.9e-09 67.0 45 71.1
SEGI_37442 Sequoiadendron giganteum HOM05D006122 ORTHO05D007426 1.9e-09 67.0 41 73.2
SEGI_08047 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.4e-09 65.1 50 60.0
SEGI_26700 Sequoiadendron giganteum HOM05D000422 ORTHO05D000002 7.4e-09 65.1 42 69.0
SEGI_05698 Sequoiadendron giganteum HOM05D017626 ORTHO05D007426 9.6e-09 64.7 46 65.2
SEGI_14777 Sequoiadendron giganteum HOM05D000188 ORTHO05D000362 1.3e-08 64.3 50 58.0
SEGI_24522 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.6e-08 63.9 46 65.2
SEGI_39692 Sequoiadendron giganteum HOM05D017626 ORTHO05D384191 2.8e-08 63.2 45 66.7
SEGI_21499 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.0e-06 57.0 36 61.1
AT5G07400 Arabidopsis thaliana HOM05D007034 ORTHO05D008665 2.6e-06 56.6 54 51.9
SEGI_38055 Sequoiadendron giganteum HOM05D000246 ORTHO05D002923 2.6e-06 56.6 35 65.7


User provided reference genes

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