Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_35069 Sequoiadendron giganteum HOM05D000274 ORTHO05D001466 8.9e-78 293.5 145 100.0
AT1G49970 Arabidopsis thaliana HOM05D000274 ORTHO05D001466 5.3e-14 81.6 92 45.7
Mapoly0165s0020 Marchantia polymorpha HOM05D000274 ORTHO05D001466 1.2e-13 80.5 117 41.0
Cpa.g.sc106.60 Carica papaya HOM05D000274 ORTHO05D001466 1.5e-13 80.1 97 46.4
Eucgr.I01073 Eucalyptus grandis HOM05D000274 ORTHO05D001466 1.5e-13 80.1 72 52.8
Os05g0592100 Oryza sativa ssp. japonica HOM05D000274 ORTHO05D001466 1.5e-13 80.1 59 59.3
THA.LOC104815211 Tarenaya hassleriana HOM05D000274 ORTHO05D001466 1.5e-13 80.1 104 43.3
THA.LOC104815223 Tarenaya hassleriana HOM05D000274 ORTHO05D001466 1.5e-13 80.1 104 43.3
CARHR040000 Cardamine hirsuta HOM05D000274 ORTHO05D001466 2.0e-13 79.7 91 46.2
AUR62042997 Chenopodium quinoa HOM05D000274 ORTHO05D001466 2.0e-13 79.7 115 38.3
Prupe.8G143200 Prunus persica HOM05D000274 ORTHO05D001466 2.0e-13 79.7 110 40.9
BolC3t21255H Brassica oleracea HOM05D000274 ORTHO05D001466 2.6e-13 79.3 91 45.1
AUR62034086 Chenopodium quinoa HOM05D000274 ORTHO05D001466 2.6e-13 79.3 115 39.1
Phvul.007G044600 Phaseolus vulgaris HOM05D000274 ORTHO05D001466 2.6e-13 79.3 94 45.7
unitig_699.g19871 Utricularia gibba HOM05D000274 ORTHO05D001466 2.6e-13 79.3 73 52.1
Zm00001eb297340 Zea mays HOM05D000274 ORTHO05D001466 2.6e-13 79.3 59 57.6
HPP92_024270 Vanilla planifolia HOM05D000274 ORTHO05D001466 3.4e-13 79.0 73 54.8
Aa31LG10G4160 Aethionema arabicum HOM05D000274 ORTHO05D001466 4.5e-13 78.6 91 45.1
Migut.N01144 Erythranthe guttata HOM05D000274 ORTHO05D001466 4.5e-13 78.6 73 52.1
Thhalv10011565m.g Eutrema salsugineum HOM05D000274 ORTHO05D001466 4.5e-13 78.6 91 45.1
ATR0208G009 Amborella trichopoda HOM05D000274 ORTHO05D001466 5.9e-13 78.2 100 39.0
A08p03440 Brassica napus HOM05D000274 ORTHO05D001466 5.9e-13 78.2 91 45.1
BraA08t32375Z Brassica rapa HOM05D000274 ORTHO05D001466 5.9e-13 78.2 91 45.1
C03p89410 Brassica napus HOM05D000274 ORTHO05D001466 7.7e-13 77.8 91 45.1
Carub.0001s3915 Capsella rubella HOM05D000274 ORTHO05D001466 7.7e-13 77.8 91 44.0
Glyma.10G257800 Glycine max HOM05D000274 ORTHO05D001466 7.7e-13 77.8 94 43.6
SalBow3G3460 Salvia bowleyana HOM05D000274 ORTHO05D001466 7.7e-13 77.8 78 51.3
CANSAT25G3838 Cannabis sativa HOM05D000274 ORTHO05D001466 1.0e-12 77.4 99 43.4
Manes.07G061800 Manihot esculenta HOM05D000274 ORTHO05D001466 1.3e-12 77.0 63 55.6
Oeu037277.2 Olea europaea HOM05D000274 ORTHO05D001466 1.3e-12 77.0 73 50.7
GSVIVG01037850001 Vitis vinifera HOM05D000274 ORTHO05D001466 1.3e-12 77.0 72 50.0
AL1G57520 Arabidopsis lyrata HOM05D000274 ORTHO05D001466 1.7e-12 76.6 111 38.7
BcaB04g17280 Brassica carinata HOM05D000274 ORTHO05D001466 1.7e-12 76.6 112 42.0
Duzib132G0689 Durio zibethinus HOM05D000274 ORTHO05D001466 1.7e-12 76.6 59 59.3
Sp1g36820 Schrenkiella parvula HOM05D000274 ORTHO05D001466 1.7e-12 76.6 91 44.0
Glyma.20G133300 Glycine max HOM05D000274 ORTHO05D001466 2.2e-12 76.3 94 43.6
Hund12580 Selenicereus undatus HOM05D000274 ORTHO05D001466 2.2e-12 76.3 96 42.7
MD05G1098400 Malus domestica HOM05D000274 ORTHO05D001466 2.9e-12 75.9 106 43.4
arahy.Tifrunner.gnm1.ann1.28MAAX Arachis hypogaea HOM05D000274 ORTHO05D001466 3.8e-12 75.5 76 47.4
CDE07G0776 Ceratophyllum demersum HOM05D000274 ORTHO05D001466 3.8e-12 75.5 105 38.1
Dinv42229 Davidia involucrata HOM05D000274 ORTHO05D001466 3.8e-12 75.5 111 37.8
Lalb_Chr06g0165201 Lupinus albus HOM05D000274 ORTHO05D001466 3.8e-12 75.5 96 40.6
EL10Ac8g19382 Beta vulgaris HOM05D000274 ORTHO05D001466 5.0e-12 75.1 63 54.0
ClCG02G006760 Citrullus lanatus HOM05D000274 ORTHO05D001466 6.5e-12 74.7 91 46.2
CsaV3_7G007880 Cucumis sativus L. HOM05D000274 ORTHO05D001466 6.5e-12 74.7 92 45.7
Hma1.2p1_1023F.1_g248840 Hydrangea macrophylla HOM05D000274 ORTHO05D001466 6.5e-12 74.7 73 49.3
Hma1.2p1_1773F.1_g301710 Hydrangea macrophylla HOM05D000274 ORTHO05D001466 6.5e-12 74.7 73 49.3
Haze_10235 Corylus avellana HOM05D000274 ORTHO05D001466 8.5e-12 74.3 94 41.5
MD10G1104200 Malus domestica HOM05D000274 ORTHO05D001466 8.5e-12 74.3 110 39.1
Nn2g15757 Nelumbo nucifera HOM05D000274 ORTHO05D001466 8.5e-12 74.3 61 54.1
PGR120G0008 Punica granatum HOM05D000274 ORTHO05D001466 8.5e-12 74.3 64 53.1
PGR142G0102 Punica granatum HOM05D000274 ORTHO05D001466 8.5e-12 74.3 64 53.1
arahy.Tifrunner.gnm1.ann1.NM7WM1 Arachis hypogaea HOM05D000274 ORTHO05D001466 1.1e-11 73.9 76 46.1
Cc02_g19750 Coffea canephora HOM05D000274 ORTHO05D001466 1.1e-11 73.9 84 46.4
Sed0025433 Sechium edule HOM05D000274 ORTHO05D001466 1.1e-11 73.9 82 46.3
Thecc.02G115600 Theobroma cacao HOM05D000274 ORTHO05D001466 1.1e-11 73.9 59 57.6
COL.COLO4_32529 Corchorus olitorius HOM05D000274 ORTHO05D001466 1.4e-11 73.6 66 53.0
Lj5g0011808 Lotus japonicus HOM05D000274 ORTHO05D001466 1.4e-11 73.6 71 49.3
Ah.09g231870 Amaranthus hybridus HOM05D000274 ORTHO05D001466 1.9e-11 73.2 63 50.8
HanXRQChr16g0509271 Helianthus annuus HOM05D000274 ORTHO05D001466 1.9e-11 73.2 104 42.3
Lsat_1_v5_gn_7_85281 Lactuca sativa HOM05D000274 ORTHO05D001466 1.9e-11 73.2 116 40.5
Oeu021365.1 Olea europaea HOM05D000274 ORTHO05D001466 1.9e-11 73.2 73 49.3
PSO017G2520 Papaver somniferum HOM05D000274 ORTHO05D001466 1.9e-11 73.2 106 38.7
Gohir.A04G118600 Gossypium hirsutum HOM05D000274 ORTHO05D001466 2.5e-11 72.8 92 44.6
RcHm_v2.0_Chr6g0253511 Rosa chinensis HOM05D000274 ORTHO05D001466 2.5e-11 72.8 95 42.1
Actinidia04380 Actinidia chinensis HOM05D000274 ORTHO05D001466 3.2e-11 72.4 63 50.8
Gohir.D04G160300 Gossypium hirsutum HOM05D000274 ORTHO05D001466 3.2e-11 72.4 59 57.6
Gorai.012G147700 Gossypium raimondii HOM05D000274 ORTHO05D001466 3.2e-11 72.4 59 57.6
Manes.10G079900 Manihot esculenta HOM05D000274 ORTHO05D001466 3.2e-11 72.4 62 51.6
DCAR_021957 Daucus carota HOM05D000274 ORTHO05D001466 5.5e-11 71.6 61 50.8
TWI14G0876 Tripterygium wilfordii HOM05D000274 ORTHO05D001466 7.2e-11 71.2 82 43.9
TAR628G0151 Trochodendron aralioides HOM05D000274 ORTHO05D001466 7.2e-11 71.2 59 52.5
Potri.009G089300 Populus trichocarpa HOM05D000274 ORTHO05D001466 9.4e-11 70.9 72 50.0
CDE04G3251 Ceratophyllum demersum HOM05D000274 ORTHO05D001466 1.2e-10 70.5 90 40.0
Ciclev10028638m.g Citrus clementina HOM05D000274 ORTHO05D001466 1.2e-10 70.5 82 45.1
FAN15G0577 Fragaria x ananassa HOM05D000274 ORTHO05D001466 1.2e-10 70.5 59 54.2
CAN.G663.8 Capsicum annuum HOM05D000274 ORTHO05D001466 1.6e-10 70.1 68 47.1
Ca_11039_v3 Cicer arietinum L. HOM05D000274 ORTHO05D001466 1.6e-10 70.1 68 47.1
ECA236G3844 Erigeron canadensis HOM05D000274 ORTHO05D001466 1.6e-10 70.1 59 54.2
PSO170G6648 Papaver somniferum HOM05D000274 ORTHO05D001466 1.6e-10 70.1 100 39.0
Sabra09G0069200 Salix brachista HOM05D000274 ORTHO05D001466 2.1e-10 69.7 72 48.6
SMO116G0050 Selaginella moellendorffii HOM05D000274 ORTHO05D001466 2.1e-10 69.7 63 46.0
MELO3C018514.2 Cucumis melo HOM05D000274 ORTHO05D001466 2.7e-10 69.3 91 42.9
FAN20G0636 Fragaria x ananassa HOM05D000274 ORTHO05D001466 2.7e-10 69.3 59 54.2
FAN24G2843 Fragaria x ananassa HOM05D000274 ORTHO05D001466 2.7e-10 69.3 59 54.2
FAN27G3447 Fragaria x ananassa HOM05D000274 ORTHO05D001466 2.7e-10 69.3 59 54.2
Sc18g0003500 Simmondsia chinensis HOM05D000274 ORTHO05D001466 2.7e-10 69.3 62 46.8
AagrBONN_evm.TU.Sc2ySwM_368.1215 Anthoceros agrestis HOM05D000274 ORTHO05D001466 6.1e-10 68.2 103 35.0
Lalb_Chr02g0145041 Lupinus albus HOM05D000274 ORTHO05D001466 6.1e-10 68.2 59 50.8
Nitab4.5_0001259g0100 Nicotiana tabacum HOM05D000274 ORTHO05D001466 6.1e-10 68.2 102 35.3
FvH4_2g04150 Fragaria vesca HOM05D000274 ORTHO05D001466 7.9e-10 67.8 59 52.5
PGSC0003DMG400025349 Solanum tuberosum HOM05D000274 ORTHO05D001466 1.0e-09 67.4 66 47.0
Atru.chr5.2377 Acer truncatum HOM05D000274 ORTHO05D001466 1.4e-09 67.0 124 35.5
VMungo0720G2220 Vigna mungo HOM05D000274 ORTHO05D001466 1.4e-09 67.0 94 40.4
Psat6g215320 Pisum sativum HOM05D000274 ORTHO05D001466 1.8e-09 66.6 68 44.1
CSS0014259 Camellia sinensis var. sinensis HOM05D000274 ORTHO05D001466 2.3e-09 66.2 59 49.2
Medtr1g106550 Medicago truncatula HOM05D000274 ORTHO05D001466 3.0e-09 65.9 80 38.8
Pp3c25_4310 Physcomitrium patens HOM05D000274 ORTHO05D001466 3.0e-09 65.9 78 39.7
TPR.G27091 Trifolium pratense HOM05D000274 ORTHO05D001466 5.1e-09 65.1 80 37.5
Nitab4.5_0004467g0010 Nicotiana tabacum HOM05D000274 ORTHO05D001466 8.8e-09 64.3 66 45.5
Solyc10g049710.2 Solanum lycopersicum HOM05D000274 ORTHO05D001466 1.1e-08 63.9 67 44.8
Sopen10g020800 Solanum pennellii HOM05D000274 ORTHO05D001466 1.1e-08 63.9 67 44.8
Aqoxy5G00889 Aquilegia oxysepala HOM05D000274 ORTHO05D001466 4.3e-08 62.0 56 50.0
Pp3c16_17780 Physcomitrium patens HOM05D000274 ORTHO05D001466 4.3e-08 62.0 61 44.3
CBR_g39885 Chara braunii HOM05D000274 ORTHO05D001466 6.3e-07 58.2 54 50.0
Thhalv10011829m.g Eutrema salsugineum HOM05D006595 ORTHO05D008238 3.1e-06 55.8 83 37.3


User provided reference genes

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