Gene: Zm00001eb297340

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb297340
  • Transcript Identifier Zm00001eb297340_T001
  • Gene Type Coding gene
  • Location 6 : 178977781-178981785 : positive

Gene Family Information

  • ID HOM05D000274
  • #Genes/#Species 1592/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb297340_T001
  • pid Zm00001eb297340_P001
  • uniprot B6U5D1
  • uniprot B4F9Z4
  • uniprot B4FYJ0
  • uniprot A0A3L6EC09
  • entrez 100274001
  • refseq NP_001141859.1
  • refseq NM_001148387.1
  • V4_identifier Zm00001d039167

Descriptions

  • Description Zm00001e032571
  • Description ATP-dependent Clp protease proteolytic subunit
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006508
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT1G49970
GO:0006364
ISO
PLAZA Integrative OrthologyrRNA processing AT1G49970
GO:0006396
ISO
PLAZA Integrative OrthologyRNA processing AT1G49970
GO:0006515
IBA
GOA Databaseprotein quality control for misfolded or incompletely synthesized proteins

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT1G49970
GO:0004252
IBA
IEA
GOA Databaseserine-type endopeptidase activity
GO:0004252
IEA
InterProserine-type endopeptidase activity
GO:0004176
IBA
IEA
GOA DatabaseATP-dependent peptidase activity
GO:0004176
IEA
InterProATP-dependent peptidase activity
GO:0051117
IBA
GOA DatabaseATPase binding
GO:0008233
IEA
GOA Databasepeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009532
ISO
PLAZA Integrative Orthologyplastid stroma AT1G49970
GO:0009840
ISO
PLAZA Integrative Orthologychloroplastic endopeptidase Clp complex AT1G49970
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G49970
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT1G49970
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G49970
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G49970
GO:0009368
IBA
GOA Databaseendopeptidase Clp complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001907 ATP-dependent Clp protease proteolytic subunit
IPR029045 ClpP/crotonase-like domain superfamily
IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA
Mapman id Description
19.4.2.9.2 Protein homeostasis.proteolysis.serine-type peptidase activities.chloroplast Clp-type protease complex.non-proteolytic core component ClpR