Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34524 Sequoiadendron giganteum HOM05D003620 ORTHO05D004261 5.2e-54 214.2 111 100.0
SMO244G0007 Selaginella moellendorffii HOM05D003620 ORTHO05D004261 2.4e-30 135.6 107 63.6
Mapoly0064s0044 Marchantia polymorpha HOM05D003620 ORTHO05D004261 8.4e-28 127.1 107 61.7
AagrBONN_evm.TU.Sc2ySwM_228.3970 Anthoceros agrestis HOM05D003620 ORTHO05D004261 7.1e-27 124.0 107 58.9
Nn1g06259 Nelumbo nucifera HOM05D003620 ORTHO05D004261 7.1e-27 124.0 73 79.5
MD08G1222700 Malus domestica HOM05D003620 ORTHO05D004261 1.3e-25 119.8 77 72.7
TAR625G1066 Trochodendron aralioides HOM05D003620 ORTHO05D004261 1.8e-25 119.4 73 75.3
ATR1136G049 Amborella trichopoda HOM05D003620 ORTHO05D004261 3.0e-25 118.6 88 67.0
Gohir.D12G014500 Gossypium hirsutum HOM05D003620 ORTHO05D004261 3.0e-25 118.6 69 81.2
Gorai.008G014600 Gossypium raimondii HOM05D003620 ORTHO05D004261 3.0e-25 118.6 69 81.2
Gohir.A12G013800 Gossypium hirsutum HOM05D003620 ORTHO05D004261 8.7e-25 117.1 69 79.7
RcHm_v2.0_Chr7g0225351 Rosa chinensis HOM05D003620 ORTHO05D004261 1.1e-24 116.7 71 77.5
CSS0011415 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 1.5e-24 116.3 73 75.3
FvH4_5g30530 Fragaria vesca HOM05D003620 ORTHO05D004261 1.5e-24 116.3 77 72.7
FAN18G1779 Fragaria x ananassa HOM05D003620 ORTHO05D004261 1.5e-24 116.3 77 72.7
Prupe.1G560600 Prunus persica HOM05D003620 ORTHO05D004261 1.5e-24 116.3 77 71.4
TWI14G0354 Tripterygium wilfordii HOM05D003620 ORTHO05D004261 1.5e-24 116.3 73 75.3
THA.LOC104811774 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 1.9e-24 115.9 69 81.2
Cpa.g.sc845.5 Carica papaya HOM05D003620 ORTHO05D004261 2.5e-24 115.5 74 73.0
Ciclev10002987m.g Citrus clementina HOM05D003620 ORTHO05D004261 2.5e-24 115.5 69 78.3
Actinidia00242 Actinidia chinensis HOM05D003620 ORTHO05D004261 3.3e-24 115.2 69 78.3
Pp3c15_7420 Physcomitrium patens HOM05D003620 ORTHO05D004261 3.3e-24 115.2 107 56.1
Cfa005564 Carpinus fangiana HOM05D003620 ORTHO05D004261 4.3e-24 114.8 78 70.5
vmacro01806 Vaccinium macrocarpon HOM05D003620 ORTHO05D004261 4.3e-24 114.8 73 72.6
FAN04G1518 Fragaria x ananassa HOM05D003620 ORTHO05D004261 5.6e-24 114.4 77 71.4
PSO541G1613 Papaver somniferum HOM05D003620 ORTHO05D004261 5.6e-24 114.4 68 76.5
Aqoxy6G00354 Aquilegia oxysepala HOM05D003620 ORTHO05D004261 7.4e-24 114.0 73 75.3
MBI06_g29671_MAGBIO Magnolia biondii HOM05D003620 ORTHO05D004261 7.4e-24 114.0 73 72.6
Actinidia38967 Actinidia chinensis HOM05D003620 ORTHO05D004261 9.6e-24 113.6 73 72.6
Sabra01G0139300 Salix brachista HOM05D003620 ORTHO05D004261 1.3e-23 113.2 78 71.8
Thecc.02G144000 Theobroma cacao HOM05D003620 ORTHO05D004261 1.3e-23 113.2 69 78.3
BcaC09g50725 Brassica carinata HOM05D003620 ORTHO05D004261 1.6e-23 112.8 67 79.1
C01p21590 Brassica napus HOM05D003620 ORTHO05D004261 1.6e-23 112.8 67 79.1
BolC1t02078H Brassica oleracea HOM05D003620 ORTHO05D004261 1.6e-23 112.8 67 79.1
Ca_00113_v3 Cicer arietinum L. HOM05D003620 ORTHO05D004261 1.6e-23 112.8 69 75.4
FAN08G3618 Fragaria x ananassa HOM05D003620 ORTHO05D004261 1.6e-23 112.8 77 70.1
Manes.10G117200 Manihot esculenta HOM05D003620 ORTHO05D004261 1.6e-23 112.8 71 76.1
Oeu047368.1 Olea europaea HOM05D003620 ORTHO05D004261 1.6e-23 112.8 70 78.6
ECA236G2397 Erigeron canadensis HOM05D003620 ORTHO05D004261 2.1e-23 112.5 69 75.4
Potri.001G172400 Populus trichocarpa HOM05D003620 ORTHO05D004261 2.1e-23 112.5 69 76.8
Aa31LG3G330 Aethionema arabicum HOM05D003620 ORTHO05D004261 2.8e-23 112.1 71 74.6
A01p17230 Brassica napus HOM05D003620 ORTHO05D004261 2.8e-23 112.1 67 77.6
BraA01t01679Z Brassica rapa HOM05D003620 ORTHO05D004261 2.8e-23 112.1 67 77.6
CANSAT11G1106 Cannabis sativa HOM05D003620 ORTHO05D004261 2.8e-23 112.1 77 68.8
Eucgr.G00656 Eucalyptus grandis HOM05D003620 ORTHO05D004261 2.8e-23 112.1 73 74.0
PSO675G2802 Papaver somniferum HOM05D003620 ORTHO05D004261 2.8e-23 112.1 68 75.0
Potri.003G061700 Populus trichocarpa HOM05D003620 ORTHO05D004261 2.8e-23 112.1 69 76.8
VMungo0540G0770 Vigna mungo HOM05D003620 ORTHO05D004261 2.8e-23 112.1 69 76.8
BcaNung03773 Brassica carinata HOM05D003620 ORTHO05D004261 3.7e-23 111.7 67 77.6
Carub.0007s1498 Capsella rubella HOM05D003620 ORTHO05D004261 3.7e-23 111.7 67 77.6
CDE08G1148 Ceratophyllum demersum HOM05D003620 ORTHO05D004261 3.7e-23 111.7 69 72.5
Atru.chr6.881 Acer truncatum HOM05D003620 ORTHO05D004261 4.8e-23 111.3 69 76.8
MSTRG.16561 Avicennia marina HOM05D003620 ORTHO05D004261 6.2e-23 110.9 69 73.9
Migut.B00643 Erythranthe guttata HOM05D003620 ORTHO05D004261 6.2e-23 110.9 69 75.4
Lalb_Chr18g0060681 Lupinus albus HOM05D003620 ORTHO05D004261 6.2e-23 110.9 69 75.4
Nitab4.5_0008610g0050 Nicotiana tabacum HOM05D003620 ORTHO05D004261 6.2e-23 110.9 69 75.4
Peaxi162Scf00001g00523 Petunia axillaris HOM05D003620 ORTHO05D004261 6.2e-23 110.9 67 76.1
THA.LOC104817775 Tarenaya hassleriana HOM05D003620 ORTHO05D004261 6.2e-23 110.9 67 79.1
CSS0027167 Camellia sinensis var. sinensis HOM05D003620 ORTHO05D004261 8.2e-23 110.5 71 73.2
Manes.07G024800 Manihot esculenta HOM05D003620 ORTHO05D004261 8.2e-23 110.5 69 76.8
Sc09g0004430 Simmondsia chinensis HOM05D003620 ORTHO05D004261 8.2e-23 110.5 69 75.4
Solyc01g104880.3 Solanum lycopersicum HOM05D003620 ORTHO05D004261 8.2e-23 110.5 69 75.4
AT4G25970 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 1.1e-22 110.2 67 76.1
Thhalv10012950m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 1.1e-22 110.2 69 75.4
Glyma.08G181200 Glycine max HOM05D003620 ORTHO05D004261 1.1e-22 110.2 69 73.9
HanXRQChr11g0337651 Helianthus annuus HOM05D003620 ORTHO05D004261 1.1e-22 110.2 73 74.0
Sabra03G0035800 Salix brachista HOM05D003620 ORTHO05D004261 1.1e-22 110.2 75 69.3
Sopen01g047400 Solanum pennellii HOM05D003620 ORTHO05D004261 1.1e-22 110.2 78 69.2
TPR.G19731 Trifolium pratense HOM05D003620 ORTHO05D004261 1.1e-22 110.2 69 73.9
CANSAT11G0919 Cannabis sativa HOM05D003620 ORTHO05D004261 1.4e-22 109.8 77 67.5
CAN.G523.97 Capsicum annuum HOM05D003620 ORTHO05D004261 1.4e-22 109.8 69 73.9
Dinv24230 Davidia involucrata HOM05D003620 ORTHO05D004261 1.4e-22 109.8 83 65.1
ECA240G1941 Erigeron canadensis HOM05D003620 ORTHO05D004261 1.4e-22 109.8 73 72.6
Thhalv10024661m.g Eutrema salsugineum HOM05D003620 ORTHO05D004261 1.4e-22 109.8 67 74.6
Sp6g18920 Schrenkiella parvula HOM05D003620 ORTHO05D004261 1.4e-22 109.8 69 73.9
Lsat_1_v5_gn_9_117920 Lactuca sativa HOM05D003620 ORTHO05D004261 1.8e-22 109.4 69 75.4
SalBow5G2235 Salvia bowleyana HOM05D003620 ORTHO05D004261 1.8e-22 109.4 69 75.4
AL161U10010 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 2.4e-22 109.0 69 73.9
AL8G33150 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 2.4e-22 109.0 69 73.9
AT5G57190 Arabidopsis thaliana HOM05D003620 ORTHO05D004261 2.4e-22 109.0 69 73.9
Lsat_1_v5_gn_7_80501 Lactuca sativa HOM05D003620 ORTHO05D004261 2.4e-22 109.0 73 71.2
Nitab4.5_0007987g0020 Nicotiana tabacum HOM05D003620 ORTHO05D004261 2.4e-22 109.0 69 73.9
Aa31LG3G13090 Aethionema arabicum HOM05D003620 ORTHO05D004261 3.1e-22 108.6 69 73.9
Carub.0008s1770 Capsella rubella HOM05D003620 ORTHO05D004261 3.1e-22 108.6 69 73.9
CARHR233480 Cardamine hirsuta HOM05D003620 ORTHO05D004261 3.1e-22 108.6 67 77.6
Lj6g0005534 Lotus japonicus HOM05D003620 ORTHO05D004261 3.1e-22 108.6 69 72.5
Psat1g218440 Pisum sativum HOM05D003620 ORTHO05D004261 3.1e-22 108.6 69 72.5
BcaB08g36077 Brassica carinata HOM05D003620 ORTHO05D004261 4.0e-22 108.2 69 73.9
BcaC04g19991 Brassica carinata HOM05D003620 ORTHO05D004261 4.0e-22 108.2 69 73.9
A10p14580 Brassica napus HOM05D003620 ORTHO05D004261 4.0e-22 108.2 69 73.9
C09p49020 Brassica napus HOM05D003620 ORTHO05D004261 4.0e-22 108.2 69 73.9
BolC9t57753H Brassica oleracea HOM05D003620 ORTHO05D004261 4.0e-22 108.2 69 73.9
BraA10t43545Z Brassica rapa HOM05D003620 ORTHO05D004261 4.0e-22 108.2 69 73.9
AUR62003395 Chenopodium quinoa HOM05D003620 ORTHO05D004261 4.0e-22 108.2 69 73.9
AL7G27030 Arabidopsis lyrata HOM05D003620 ORTHO05D004261 5.3e-22 107.8 67 76.1
AUR62004784 Chenopodium quinoa HOM05D003620 ORTHO05D004261 5.3e-22 107.8 69 73.9
PGR042G1212 Punica granatum HOM05D003620 ORTHO05D004261 5.3e-22 107.8 77 68.8
SalBow5G2754 Salvia bowleyana HOM05D003620 ORTHO05D004261 5.3e-22 107.8 69 75.4
CARHR270980 Cardamine hirsuta HOM05D003620 ORTHO05D004261 6.9e-22 107.5 72 70.8
Cc02_g21940 Coffea canephora HOM05D003620 ORTHO05D004261 6.9e-22 107.5 73 71.2
CsaV3_7G006180 Cucumis sativus L. HOM05D003620 ORTHO05D004261 6.9e-22 107.5 69 72.5
DCAR_001444 Daucus carota HOM05D003620 ORTHO05D004261 6.9e-22 107.5 76 68.4
Peaxi162Scf00152g01227 Petunia axillaris HOM05D003620 ORTHO05D004261 6.9e-22 107.5 71 70.4
Sed0005951 Sechium edule HOM05D003620 ORTHO05D004261 6.9e-22 107.5 76 67.1
Os01g0959800 Oryza sativa ssp. japonica HOM05D003620 ORTHO05D004261 1.2e-21 106.7 69 72.5
Hund22190 Selenicereus undatus HOM05D003620 ORTHO05D004261 1.2e-21 106.7 69 73.9
EL10Ac4g08941 Beta vulgaris HOM05D003620 ORTHO05D004261 1.5e-21 106.3 71 71.8
ClCG09G013430 Citrullus lanatus HOM05D003620 ORTHO05D004261 1.5e-21 106.3 81 64.2
GSVIVG01029732001 Vitis vinifera HOM05D003620 ORTHO05D004261 1.5e-21 106.3 65 73.8
QL02p098754 Quercus lobata HOM05D003620 ORTHO05D004261 2.0e-21 105.9 78 66.7
MELO3C018674.2 Cucumis melo HOM05D003620 ORTHO05D004261 3.4e-21 105.1 69 72.5
Medtr2g008190 Medicago truncatula HOM05D003620 ORTHO05D004261 3.4e-21 105.1 69 69.6
HanXRQChr03g0065791 Helianthus annuus HOM05D003620 ORTHO05D004261 5.8e-21 104.4 73 67.1
Phvul.006G208800 Phaseolus vulgaris HOM05D003620 ORTHO05D004261 7.6e-21 104.0 69 71.0
Lj5C243T9 Lonicera japonica HOM05D003620 ORTHO05D004261 8.2e-15 84.0 59 71.2
FAN13G1243 Fragaria x ananassa HOM05D003620 ORTHO05D004261 2.4e-14 82.4 58 67.2
Oeu037206.2 Olea europaea HOM05D003620 ORTHO05D004261 3.2e-11 72.0 40 80.0
Duzib132G0147 Durio zibethinus HOM05D003620 ORTHO05D004261 4.2e-11 71.6 69 56.5
CiPaw.05G039200 Carya illinoinensis HOM05D003620 ORTHO05D004261 5.5e-11 71.2 37 83.8
Lalb_Chr25g0281381 Lupinus albus HOM05D003620 ORTHO05D004261 2.1e-10 69.3 40 77.5
Rhsim11G0134200 Rhododendron simsii HOM05D003620 ORTHO05D004261 7.9e-10 67.4 73 50.7
PRCOL_00006167 Prasinoderma coloniale HOM05D003620 ORTHO05D004261 2.3e-09 65.9 63 52.4
HPP92_019398 Vanilla planifolia HOM05D003620 ORTHO05D004261 2.3e-09 65.9 37 73.0
COL.COLO4_20874 Corchorus olitorius HOM05D003620 ORTHO05D004261 3.0e-09 65.5 69 53.6
Lsat_1_v5_gn_2_44401 Lactuca sativa HOM05D003620 ORTHO05D004261 5.1e-09 64.7 37 67.6
Lsat_1_v5_gn_4_179761 Lactuca sativa HOM05D003620 ORTHO05D004261 3.3e-08 62.0 37 64.9
CBR_g85559 Chara braunii HOM05D003620 ORTHO05D004261 4.3e-08 61.6 37 67.6
Cre02.g119600 Chlamydomonas reinhardtii HOM05D003620 ORTHO05D004261 1.7e-07 59.7 70 41.4


User provided reference genes

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