Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34222 Sequoiadendron giganteum HOM05D002263 ORTHO05D003537 5.9e-35 150.2 71 100.0
GSVIVG01032138001 Vitis vinifera HOM05D002263 ORTHO05D003537 7.8e-27 123.2 70 80.0
Atru.chr11.2587 Acer truncatum HOM05D002263 ORTHO05D003537 1.7e-26 122.1 70 80.0
Dinv43424 Davidia involucrata HOM05D002263 ORTHO05D003537 3.0e-26 121.3 70 80.0
Rhsim01G0127100 Rhododendron simsii HOM05D002263 ORTHO05D003537 3.0e-26 121.3 70 80.0
Rhsim01G0128300 Rhododendron simsii HOM05D002263 ORTHO05D003537 3.0e-26 121.3 70 80.0
PSO063G6561 Papaver somniferum HOM05D002263 ORTHO05D003537 3.9e-26 120.9 70 80.0
unitig_8.g3777 Utricularia gibba HOM05D002263 ORTHO05D003537 3.9e-26 120.9 70 78.6
Ciclev10030505m.g Citrus clementina HOM05D002263 ORTHO05D003537 6.6e-26 120.2 70 78.6
Cc02_g28170 Coffea canephora HOM05D002263 ORTHO05D003537 6.6e-26 120.2 70 80.0
Potri.001G264000 Populus trichocarpa HOM05D002263 ORTHO05D003537 6.6e-26 120.2 70 78.6
Thecc.10G041300 Theobroma cacao HOM05D002263 ORTHO05D003537 6.6e-26 120.2 70 78.6
unitig_22.g5326 Utricularia gibba HOM05D002263 ORTHO05D003537 6.6e-26 120.2 70 77.1
Duzib106G1002 Durio zibethinus HOM05D002263 ORTHO05D003537 8.6e-26 119.8 70 77.1
PSO832G4242 Papaver somniferum HOM05D002263 ORTHO05D003537 8.6e-26 119.8 70 80.0
Hma1.2p1_2160F.1_g315580 Hydrangea macrophylla HOM05D002263 ORTHO05D003537 1.1e-25 119.4 70 77.1
Prupe.2G017500 Prunus persica HOM05D002263 ORTHO05D003537 1.1e-25 119.4 70 78.6
RcHm_v2.0_Chr1g0317031 Rosa chinensis HOM05D002263 ORTHO05D003537 1.1e-25 119.4 70 78.6
ATR0332G038 Amborella trichopoda HOM05D002263 ORTHO05D003537 1.5e-25 119.0 70 77.1
CDE10G0015 Ceratophyllum demersum HOM05D002263 ORTHO05D003537 1.5e-25 119.0 70 77.1
Eucgr.H02633 Eucalyptus grandis HOM05D002263 ORTHO05D003537 1.5e-25 119.0 70 77.1
Migut.B01281 Erythranthe guttata HOM05D002263 ORTHO05D003537 1.9e-25 118.6 70 77.1
Actinidia19405 Actinidia chinensis HOM05D002263 ORTHO05D003537 2.5e-25 118.2 70 75.7
CSS0021570 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 2.5e-25 118.2 70 74.3
CSS0033402 Camellia sinensis var. sinensis HOM05D002263 ORTHO05D003537 2.5e-25 118.2 70 74.3
CANSAT80G1724 Cannabis sativa HOM05D002263 ORTHO05D003537 3.3e-25 117.9 70 75.7
FvH4_7g01280 Fragaria vesca HOM05D002263 ORTHO05D003537 3.3e-25 117.9 70 77.1
FAN01G0038 Fragaria x ananassa HOM05D002263 ORTHO05D003537 3.3e-25 117.9 70 77.1
FAN06G0127 Fragaria x ananassa HOM05D002263 ORTHO05D003537 3.3e-25 117.9 70 77.1
MD02G1308000 Malus domestica HOM05D002263 ORTHO05D003537 4.3e-25 117.5 70 78.6
Nitab4.5_0002918g0080 Nicotiana tabacum HOM05D002263 ORTHO05D003537 4.3e-25 117.5 70 74.3
Peaxi162Scf00744g00349 Petunia axillaris HOM05D002263 ORTHO05D003537 4.3e-25 117.5 70 74.3
PGR031G1196 Punica granatum HOM05D002263 ORTHO05D003537 4.3e-25 117.5 70 77.1
TAR623G1165 Trochodendron aralioides HOM05D002263 ORTHO05D003537 4.3e-25 117.5 70 75.7
HPP92_014707 Vanilla planifolia HOM05D002263 ORTHO05D003537 4.3e-25 117.5 70 75.7
AL3G38880 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 5.6e-25 117.1 70 74.3
THA.LOC104820131 Tarenaya hassleriana HOM05D002263 ORTHO05D003537 5.6e-25 117.1 70 75.7
AT3G23890 Arabidopsis thaliana HOM05D002263 ORTHO05D003537 7.3e-25 116.7 70 72.9
Nn2g15271 Nelumbo nucifera HOM05D002263 ORTHO05D003537 7.3e-25 116.7 70 75.7
Potri.009G058900 Populus trichocarpa HOM05D002263 ORTHO05D003537 7.3e-25 116.7 70 75.7
SGA_v2.0_scaffold119G32746 Striga asiatica HOM05D002263 ORTHO05D003537 7.3e-25 116.7 70 74.3
Aa31LG5G18570 Aethionema arabicum HOM05D002263 ORTHO05D003537 9.5e-25 116.3 70 74.3
CAN.G219.44 Capsicum annuum HOM05D002263 ORTHO05D003537 9.5e-25 116.3 70 72.9
FAN03G0380 Fragaria x ananassa HOM05D002263 ORTHO05D003537 9.5e-25 116.3 70 75.7
FAN10G1377 Fragaria x ananassa HOM05D002263 ORTHO05D003537 9.5e-25 116.3 70 75.7
Solyc01g087500.3 Solanum lycopersicum HOM05D002263 ORTHO05D003537 9.5e-25 116.3 70 72.9
Sopen01g034420 Solanum pennellii HOM05D002263 ORTHO05D003537 9.5e-25 116.3 70 72.9
ClCG10G012270 Citrullus lanatus HOM05D002263 ORTHO05D003537 1.2e-24 115.9 70 75.7
COL.COLO4_15049 Corchorus olitorius HOM05D002263 ORTHO05D003537 1.2e-24 115.9 70 75.7
MELO3C023986.2 Cucumis melo HOM05D002263 ORTHO05D003537 1.2e-24 115.9 70 75.7
Os02g0699700 Oryza sativa ssp. japonica HOM05D002263 ORTHO05D003537 1.2e-24 115.9 70 74.3
QL04p008074 Quercus lobata HOM05D002263 ORTHO05D003537 1.2e-24 115.9 70 78.6
QL04p008574 Quercus lobata HOM05D002263 ORTHO05D003537 1.2e-24 115.9 70 78.6
Sed0024297 Sechium edule HOM05D002263 ORTHO05D003537 1.2e-24 115.9 70 75.7
PGSC0003DMG400006793 Solanum tuberosum HOM05D002263 ORTHO05D003537 1.2e-24 115.9 70 72.9
Thhalv10024219m.g Eutrema salsugineum HOM05D002263 ORTHO05D003537 1.6e-24 115.5 70 72.9
Eucgr.H02748 Eucalyptus grandis HOM05D002263 ORTHO05D003537 2.1e-24 115.2 70 75.7
Nitab4.5_0000707g0240 Nicotiana tabacum HOM05D002263 ORTHO05D003537 2.1e-24 115.2 70 72.9
Sed0008745 Sechium edule HOM05D002263 ORTHO05D003537 2.1e-24 115.2 70 74.3
Haze_03174 Corylus avellana HOM05D002263 ORTHO05D003537 2.8e-24 114.8 70 75.7
CsaV3_3G032050 Cucumis sativus L. HOM05D002263 ORTHO05D003537 2.8e-24 114.8 70 74.3
SalBow5G1665 Salvia bowleyana HOM05D002263 ORTHO05D003537 2.8e-24 114.8 70 72.9
Sabra09G0043200 Salix brachista HOM05D002263 ORTHO05D003537 3.6e-24 114.4 70 74.3
TAR369G0754 Trochodendron aralioides HOM05D002263 ORTHO05D003537 3.6e-24 114.4 70 74.3
BcaNung01342 Brassica carinata HOM05D002263 ORTHO05D003537 4.7e-24 114.0 70 72.9
Lj9C634T13 Lonicera japonica HOM05D002263 ORTHO05D003537 4.7e-24 114.0 70 71.4
MD07G1017700 Malus domestica HOM05D002263 ORTHO05D003537 4.7e-24 114.0 70 77.1
Cfa010797 Carpinus fangiana HOM05D002263 ORTHO05D003537 6.2e-24 113.6 70 74.3
Gohir.A10G219600 Gossypium hirsutum HOM05D002263 ORTHO05D003537 6.2e-24 113.6 70 74.3
CiPaw.05G149100 Carya illinoinensis HOM05D002263 ORTHO05D003537 8.0e-24 113.2 70 75.7
RcHm_v2.0_Chr1g0375001 Rosa chinensis HOM05D002263 ORTHO05D003537 8.0e-24 113.2 70 72.9
Sc16g0001930 Simmondsia chinensis HOM05D002263 ORTHO05D003537 8.0e-24 113.2 70 72.9
AagrBONN_evm.TU.Sc2ySwM_344.3755 Anthoceros agrestis HOM05D002263 ORTHO05D003537 1.1e-23 112.8 70 70.0
Hund15422 Selenicereus undatus HOM05D002263 ORTHO05D003537 1.1e-23 112.8 70 72.9
BcaNung00438 Brassica carinata HOM05D002263 ORTHO05D003537 1.8e-23 112.1 70 72.9
CARHR061100 Cardamine hirsuta HOM05D002263 ORTHO05D003537 1.8e-23 112.1 70 72.9
Manes.10G140100 Manihot esculenta HOM05D002263 ORTHO05D003537 1.8e-23 112.1 70 72.9
QL04p008053 Quercus lobata HOM05D002263 ORTHO05D003537 1.8e-23 112.1 70 75.7
Sp7g26900 Schrenkiella parvula HOM05D002263 ORTHO05D003537 1.8e-23 112.1 70 72.9
arahy.Tifrunner.gnm1.ann1.CKFG51 Arachis hypogaea HOM05D002263 ORTHO05D003537 2.3e-23 111.7 70 74.3
arahy.Tifrunner.gnm1.ann1.ES5MTE Arachis hypogaea HOM05D002263 ORTHO05D003537 2.3e-23 111.7 70 74.3
MSTRG.20571 Avicennia marina HOM05D002263 ORTHO05D003537 2.3e-23 111.7 70 72.9
EL10Ac2g04344 Beta vulgaris HOM05D002263 ORTHO05D003537 2.3e-23 111.7 70 71.4
CiPaw.14G001600 Carya illinoinensis HOM05D002263 ORTHO05D003537 2.3e-23 111.7 70 74.3
Gohir.D10G229100 Gossypium hirsutum HOM05D002263 ORTHO05D003537 2.3e-23 111.7 70 72.9
Gorai.011G261600 Gossypium raimondii HOM05D002263 ORTHO05D003537 2.3e-23 111.7 70 72.9
TWI73G0071 Tripterygium wilfordii HOM05D002263 ORTHO05D003537 3.1e-23 111.3 70 71.4
BcaC09g51672 Brassica carinata HOM05D002263 ORTHO05D003537 4.0e-23 110.9 70 70.0
C01p10550 Brassica napus HOM05D002263 ORTHO05D003537 4.0e-23 110.9 70 70.0
BolC1t01018H Brassica oleracea HOM05D002263 ORTHO05D003537 4.0e-23 110.9 70 70.0
Carub.0003s2419 Capsella rubella HOM05D002263 ORTHO05D003537 5.2e-23 110.5 70 70.0
SMO147G0130 Selaginella moellendorffii HOM05D002263 ORTHO05D003537 5.2e-23 110.5 70 67.1
SMO330G0020 Selaginella moellendorffii HOM05D002263 ORTHO05D003537 5.2e-23 110.5 70 67.1
Ah.02g122490 Amaranthus hybridus HOM05D002263 ORTHO05D003537 6.8e-23 110.2 70 70.0
QL04p008683 Quercus lobata HOM05D002263 ORTHO05D003537 6.8e-23 110.2 70 75.7
A01p09010 Brassica napus HOM05D002263 ORTHO05D003537 8.9e-23 109.8 70 71.4
BraA01t00849Z Brassica rapa HOM05D002263 ORTHO05D003537 8.9e-23 109.8 70 71.4
QL04p008589 Quercus lobata HOM05D002263 ORTHO05D003537 8.9e-23 109.8 70 75.7
Ah.06g183060 Amaranthus hybridus HOM05D002263 ORTHO05D003537 1.2e-22 109.4 70 70.0
CBR_g55332 Chara braunii HOM05D002263 ORTHO05D003537 1.2e-22 109.4 70 70.0
Oeu049493.1 Olea europaea HOM05D002263 ORTHO05D003537 1.2e-22 109.4 70 68.6
RhsimUnG0044300 Rhododendron simsii HOM05D002263 ORTHO05D003537 1.2e-22 109.4 70 71.4
arahy.Tifrunner.gnm1.ann1.NCP65V Arachis hypogaea HOM05D002263 ORTHO05D003537 1.5e-22 109.0 70 71.4
arahy.Tifrunner.gnm1.ann1.VJ5EI6 Arachis hypogaea HOM05D002263 ORTHO05D003537 1.5e-22 109.0 70 71.4
AUR62009398 Chenopodium quinoa HOM05D002263 ORTHO05D003537 1.5e-22 109.0 70 68.6
TAR369G0234 Trochodendron aralioides HOM05D002005 ORTHO05D003757 1.5e-22 109.0 70 70.0
Mapoly0050s0134 Marchantia polymorpha HOM05D002263 ORTHO05D003537 2.0e-22 108.6 70 70.0
Psat0s825g0040 Pisum sativum HOM05D002263 ORTHO05D003537 3.4e-22 107.8 70 71.4
SGA_v2.0_scaffold105G30414 Striga asiatica HOM05D002263 ORTHO05D003537 3.4e-22 107.8 70 71.4
Ah.10g038760 Amaranthus hybridus HOM05D002263 ORTHO05D003537 4.4e-22 107.5 70 68.6
AUR62023080 Chenopodium quinoa HOM05D002263 ORTHO05D003537 4.4e-22 107.5 70 67.1
Sed0023112 Sechium edule HOM05D002263 ORTHO05D003537 4.4e-22 107.5 70 68.6
Zm00001eb188030 Zea mays HOM05D002263 ORTHO05D003537 4.4e-22 107.5 70 68.6
Lj3g0016100 Lotus japonicus HOM05D002263 ORTHO05D003537 5.8e-22 107.1 70 70.0
Pp3c19_3610 Physcomitrium patens HOM05D002263 ORTHO05D003537 5.8e-22 107.1 70 70.0
Pp3c18_20260 Physcomitrium patens HOM05D002263 ORTHO05D003537 7.5e-22 106.7 70 68.6
Pp3c18_20261 Physcomitrium patens HOM05D002263 ORTHO05D003537 7.5e-22 106.7 70 68.6
Zm00001eb251620 Zea mays HOM05D002263 ORTHO05D003537 7.5e-22 106.7 70 68.6
ECA248G0809 Erigeron canadensis HOM05D002263 ORTHO05D003537 9.8e-22 106.3 70 70.0
Ca_14467_v3 Cicer arietinum L. HOM05D002263 ORTHO05D003537 1.3e-21 105.9 70 70.0
Oeu049004.1 Olea europaea HOM05D002263 ORTHO05D003537 1.7e-21 105.5 68 70.6
Lsat_1_v5_gn_1_105720 Lactuca sativa HOM05D002263 ORTHO05D003537 2.2e-21 105.1 70 68.6
HanXRQChr14g0447821 Helianthus annuus HOM05D002263 ORTHO05D003537 2.9e-21 104.8 70 68.6
Phvul.005G024200 Phaseolus vulgaris HOM05D002263 ORTHO05D003537 2.9e-21 104.8 70 67.1
HanXRQChr01g0016471 Helianthus annuus HOM05D002263 ORTHO05D003537 3.7e-21 104.4 70 67.1
Glyma.10G090000 Glycine max HOM05D002263 ORTHO05D003537 4.9e-21 104.0 70 68.6
TPR.G27843 Trifolium pratense HOM05D002263 ORTHO05D003537 4.9e-21 104.0 70 67.1
Lj2C383G13 Lonicera japonica HOM05D002263 ORTHO05D003537 6.4e-21 103.6 70 67.1
VMungo1080G1747 Vigna mungo HOM05D002263 ORTHO05D003537 6.4e-21 103.6 70 68.6
Psat7g085320 Pisum sativum HOM05D002263 ORTHO05D003537 8.3e-21 103.2 70 67.1
Medtr3g031040 Medicago truncatula HOM05D002263 ORTHO05D003537 1.1e-20 102.8 70 67.1
Hma1.2p1_0326F.1_g126210 Hydrangea macrophylla HOM05D002263 ORTHO05D003537 1.4e-20 102.4 70 65.7
Lalb_Chr19g0140281 Lupinus albus HOM05D002263 ORTHO05D003537 1.4e-20 102.4 70 67.1
Glyma.15G276000 Glycine max HOM05D002263 ORTHO05D003537 1.9e-20 102.1 70 67.1
TPR.G22438 Trifolium pratense HOM05D002263 ORTHO05D003537 2.4e-20 101.7 70 65.7
Medtr3g085840 Medicago truncatula HOM05D002263 ORTHO05D003537 5.4e-20 100.5 70 65.7
Cre01.g009250 Chlamydomonas reinhardtii HOM05D002263 ORTHO05D003537 7.0e-20 100.1 70 65.7
Aqoxy2G00154 Aquilegia oxysepala HOM05D002263 ORTHO05D003537 1.2e-19 99.4 70 64.3
Medtr1g075370 Medicago truncatula HOM05D002263 ORTHO05D003537 2.7e-19 98.2 70 62.9
MCO05G739 Micromonas commoda HOM05D002263 ORTHO05D003537 3.5e-19 97.8 68 64.7
MBI02_g23141_MAGBIO Magnolia biondii HOM05D002263 ORTHO05D003537 4.6e-19 97.4 61 73.8
Lj4g0004129 Lotus japonicus HOM05D002263 ORTHO05D003537 1.7e-18 95.5 70 62.9
Medtr0756s0010 Medicago truncatula HOM05D002263 ORTHO05D003537 2.3e-18 95.1 70 62.9
Lj1g0019754 Lotus japonicus HOM05D002263 ORTHO05D003537 3.0e-18 94.7 70 62.9
Medtr1g051315 Medicago truncatula HOM05D002263 ORTHO05D003537 3.9e-18 94.4 70 61.4
PRCOL_00004802 Prasinoderma coloniale HOM05D002263 ORTHO05D003537 3.9e-18 94.4 70 57.1
Lj4g0010623 Lotus japonicus HOM05D002263 ORTHO05D003537 2.5e-17 91.7 70 60.0
Actinidia31076 Actinidia chinensis HOM05D002263 ORTHO05D003537 3.6e-16 87.8 56 71.4
SEGI_12910 Sequoiadendron giganteum HOM05D002263 ORTHO05D013693 4.7e-16 87.4 45 88.9
SEGI_14036 Sequoiadendron giganteum HOM05D002263 ORTHO05D013693 1.4e-15 85.9 45 88.9
SEGI_32756 Sequoiadendron giganteum HOM05D002263 ORTHO05D013693 5.2e-15 84.0 44 86.4
BolC5t34561H Brassica oleracea HOM05D002263 ORTHO05D003537 6.8e-15 83.6 68 54.4
COL.COLO4_02379 Corchorus olitorius HOM05D002263 ORTHO05D003537 1.5e-14 82.4 70 54.3
TPR.G32072 Trifolium pratense HOM05D002263 ORTHO05D003537 2.0e-14 82.0 72 56.9
Nn7g36258 Nelumbo nucifera HOM05D002263 ORTHO05D003537 2.6e-14 81.6 45 77.8
Prupe.2G018500 Prunus persica HOM05D002263 ORTHO05D003537 1.7e-13 79.0 47 74.5
DCAR_022381 Daucus carota HOM05D002263 ORTHO05D003537 1.9e-12 75.5 45 68.9
vmacro14860 Vaccinium macrocarpon HOM05D002263 ORTHO05D003537 9.2e-12 73.2 70 52.9
C03p05140 Brassica napus HOM05D002263 ORTHO05D003537 1.6e-11 72.4 73 54.8
C03p05160 Brassica napus HOM05D002263 ORTHO05D003537 1.6e-11 72.4 73 54.8
C03p05180 Brassica napus HOM05D002263 ORTHO05D003537 1.6e-11 72.4 73 54.8
BolC3t13035H Brassica oleracea HOM05D002263 ORTHO05D003537 1.6e-11 72.4 73 54.8
TPR.G17543 Trifolium pratense HOM05D002263 ORTHO05D003537 2.1e-11 72.0 71 47.9
BcaB01g05526 Brassica carinata HOM05D002263 ORTHO05D003537 2.3e-10 68.6 73 52.1
BcaB01g05530 Brassica carinata HOM05D002263 ORTHO05D003537 2.3e-10 68.6 73 52.1
FvH4_3g01730 Fragaria vesca HOM05D002263 ORTHO05D003537 1.1e-09 66.2 70 51.4
Lj4A282T39 Lonicera japonica HOM05D002263 ORTHO05D003537 1.1e-09 66.2 43 62.8
AL7G27330 Arabidopsis lyrata HOM05D002263 ORTHO05D003537 1.2e-08 62.8 68 45.6
FAN25G0983 Fragaria x ananassa HOM05D002263 ORTHO05D003537 1.1e-07 59.7 68 48.5
SHI25342 Sapria himalayana HOM05D002263 ORTHO05D003537 1.4e-07 59.3 45 57.8
MD11G1007100 Malus domestica HOM05D002263 ORTHO05D003537 9.9e-06 53.1 48 45.8


User provided reference genes

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