Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33727 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 1.9e-262 908.7 465 100.0
SEGI_03850 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 1.8e-119 433.7 214 100.0
COL.COLO4_25704 Corchorus olitorius HOM05D005539 ORTHO05D006644 1.4e-71 274.6 323 47.7
QL08p063092 Quercus lobata HOM05D005539 ORTHO05D006644 1.8e-71 274.2 323 46.7
Nn2g13702 Nelumbo nucifera HOM05D005539 ORTHO05D006644 2.6e-70 270.4 323 48.3
GSVIVG01032835001 Vitis vinifera HOM05D005539 ORTHO05D006644 4.4e-70 269.6 323 46.7
Ciclev10030725m.g Citrus clementina HOM05D005539 ORTHO05D006644 1.3e-69 268.1 324 47.2
Dinv17987 Davidia involucrata HOM05D005539 ORTHO05D006644 1.7e-69 267.7 320 46.6
MD01G1152200 Malus domestica HOM05D005539 ORTHO05D006644 2.9e-69 266.9 320 46.6
PGR044G2440 Punica granatum HOM05D005539 ORTHO05D006644 3.7e-69 266.5 355 45.1
Thecc.10G020000 Theobroma cacao HOM05D005539 ORTHO05D006644 3.7e-69 266.5 323 46.1
Gohir.A10G235300 Gossypium hirsutum HOM05D005539 ORTHO05D006644 4.9e-69 266.2 323 46.4
Nitab4.5_0003886g0070 Nicotiana tabacum HOM05D005539 ORTHO05D006644 4.9e-69 266.2 323 46.7
Oeu064386.1 Olea europaea HOM05D005539 ORTHO05D006644 1.1e-68 265.0 350 44.9
vmacro10050 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 1.1e-68 265.0 322 49.1
Gohir.D10G247700 Gossypium hirsutum HOM05D005539 ORTHO05D006644 1.4e-68 264.6 323 46.1
Gorai.011G286200 Gossypium raimondii HOM05D005539 ORTHO05D006644 1.4e-68 264.6 323 46.1
TAR369G0030 Trochodendron aralioides HOM05D005539 ORTHO05D006644 1.8e-68 264.2 323 45.8
Hma1.2p1_0703F.1_g206530 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 3.2e-68 263.5 323 45.8
Dinv17988 Davidia involucrata HOM05D005539 ORTHO05D006644 7.0e-68 262.3 322 46.0
Duzib106G1755 Durio zibethinus HOM05D005539 ORTHO05D006644 7.0e-68 262.3 320 44.7
Nitab4.5_0001171g0020 Nicotiana tabacum HOM05D005539 ORTHO05D006644 9.2e-68 261.9 323 46.1
CiPaw.01G297900 Carya illinoinensis HOM05D005539 ORTHO05D006644 1.6e-67 261.2 320 45.0
Sc14g0005370 Simmondsia chinensis HOM05D005539 ORTHO05D006644 2.0e-67 260.8 353 43.9
ECA238G2434 Erigeron canadensis HOM05D005539 ORTHO05D006644 2.7e-67 260.4 324 45.1
Cc02_g06620 Coffea canephora HOM05D005539 ORTHO05D006644 3.5e-67 260.0 323 45.2
HanXRQChr14g0459831 Helianthus annuus HOM05D005539 ORTHO05D006644 3.5e-67 260.0 325 44.6
Lsat_1_v5_gn_2_122921 Lactuca sativa HOM05D005539 ORTHO05D006644 3.5e-67 260.0 325 44.9
Migut.F01380 Erythranthe guttata HOM05D005539 ORTHO05D006644 4.6e-67 259.6 320 45.6
Atru.chr12.24 Acer truncatum HOM05D005539 ORTHO05D006644 7.8e-67 258.8 324 46.3
Peaxi162Scf00825g00123 Petunia axillaris HOM05D005539 ORTHO05D006644 7.8e-67 258.8 323 45.5
AUR62012239 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.0e-66 258.5 324 43.5
Prupe.2G249200 Prunus persica HOM05D005539 ORTHO05D006644 1.0e-66 258.5 324 46.3
EL10Ac2g04818 Beta vulgaris HOM05D005539 ORTHO05D006644 1.7e-66 257.7 320 43.4
DCAR_011807 Daucus carota HOM05D005539 ORTHO05D006644 2.3e-66 257.3 324 44.1
Thhalv10012715m.g Eutrema salsugineum HOM05D005539 ORTHO05D006644 2.3e-66 257.3 331 44.4
Potri.008G067600 Populus trichocarpa HOM05D005539 ORTHO05D006644 3.0e-66 256.9 323 45.2
Potri.010G189700 Populus trichocarpa HOM05D005539 ORTHO05D006644 3.9e-66 256.5 319 44.8
PSO384G3240 Papaver somniferum HOM05D005539 ORTHO05D006644 5.0e-66 256.1 325 47.4
A10p30680 Brassica napus HOM05D005539 ORTHO05D006644 6.6e-66 255.8 333 44.4
AT5G05680 Arabidopsis thaliana HOM05D005539 ORTHO05D006644 8.6e-66 255.4 331 43.8
Lj8A68G37 Lonicera japonica HOM05D005539 ORTHO05D006644 8.6e-66 255.4 320 44.4
Sp6g37210 Schrenkiella parvula HOM05D005539 ORTHO05D006644 8.6e-66 255.4 344 44.2
Sopen11g010350 Solanum pennellii HOM05D005539 ORTHO05D006644 1.9e-65 254.2 323 45.2
CAN.G1694.1 Capsicum annuum HOM05D005539 ORTHO05D006644 3.3e-65 253.4 320 44.1
Rhsim09G0176800 Rhododendron simsii HOM05D005539 ORTHO05D006644 3.3e-65 253.4 322 46.0
Manes.10G013600 Manihot esculenta HOM05D005539 ORTHO05D006644 4.3e-65 253.1 323 44.3
Carub.0006s0457 Capsella rubella HOM05D005539 ORTHO05D006644 7.3e-65 252.3 331 43.5
Aqoxy4G02586 Aquilegia oxysepala HOM05D005539 ORTHO05D006644 9.5e-65 251.9 320 44.1
THA.LOC104826852 Tarenaya hassleriana HOM05D005539 ORTHO05D006644 9.5e-65 251.9 331 42.6
C09p71160 Brassica napus HOM05D005539 ORTHO05D006644 1.2e-64 251.5 333 44.1
CARHR207600 Cardamine hirsuta HOM05D005539 ORTHO05D006644 1.2e-64 251.5 331 43.5
Hund15944 Selenicereus undatus HOM05D005539 ORTHO05D006644 1.2e-64 251.5 320 42.8
Eucgr.J00217 Eucalyptus grandis HOM05D005539 ORTHO05D006644 1.6e-64 251.1 323 44.3
PSO339G2908 Papaver somniferum HOM05D005539 ORTHO05D006644 1.6e-64 251.1 371 41.8
Cpa.g.sc19.181 Carica papaya HOM05D005539 ORTHO05D006644 2.1e-64 250.8 326 44.2
FvH4_7g24380 Fragaria vesca HOM05D005539 ORTHO05D006644 2.1e-64 250.8 320 43.4
FAN06G4384 Fragaria x ananassa HOM05D005539 ORTHO05D006644 2.1e-64 250.8 320 43.4
Sabra10G0146300 Salix brachista HOM05D005539 ORTHO05D006644 2.8e-64 250.4 319 43.6
CANSAT56G2522 Cannabis sativa HOM05D005539 ORTHO05D006644 3.6e-64 250.0 350 42.9
RcHm_v2.0_Chr1g0370081 Rosa chinensis HOM05D005539 ORTHO05D006644 6.2e-64 249.2 323 44.9
AagrBONN_evm.TU.Sc2ySwM_362.2924 Anthoceros agrestis HOM05D005539 ORTHO05D006644 1.0e-63 248.4 344 42.7
AL6G15570 Arabidopsis lyrata HOM05D005539 ORTHO05D006644 1.8e-63 247.7 333 43.2
AUR62022871 Chenopodium quinoa HOM05D005539 ORTHO05D006644 1.8e-63 247.7 335 42.4
Mapoly0043s0044 Marchantia polymorpha HOM05D005539 ORTHO05D006644 1.8e-63 247.7 385 40.3
BcaB05g21701 Brassica carinata HOM05D005539 ORTHO05D006644 3.1e-63 246.9 340 44.1
FAN10G0075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.1e-63 246.9 320 43.1
FAN01G2659 Fragaria x ananassa HOM05D005539 ORTHO05D006644 5.2e-63 246.1 320 43.1
FAN03G1336 Fragaria x ananassa HOM05D005539 ORTHO05D006644 8.9e-63 245.4 320 43.1
Psat5g128120 Pisum sativum HOM05D005539 ORTHO05D006644 8.9e-63 245.4 323 42.1
Glyma.11G229000 Glycine max HOM05D005539 ORTHO05D006644 1.5e-62 244.6 353 41.4
Aa31LG11G6690 Aethionema arabicum HOM05D005539 ORTHO05D006644 2.0e-62 244.2 331 42.9
BolC9t59878H Brassica oleracea HOM05D005539 ORTHO05D006644 5.8e-62 242.7 359 41.5
Phvul.001G242300 Phaseolus vulgaris HOM05D005539 ORTHO05D006644 5.8e-62 242.7 350 40.9
Sc14g0005420 Simmondsia chinensis HOM05D005539 ORTHO05D006644 5.8e-62 242.7 350 41.7
VMungo1383G3500 Vigna mungo HOM05D005539 ORTHO05D006644 5.8e-62 242.7 320 43.1
Lj6g0015972 Lotus japonicus HOM05D005539 ORTHO05D006644 9.8e-62 241.9 323 41.8
MSTRG.8325 Avicennia marina HOM05D005539 ORTHO05D006644 1.7e-61 241.1 320 41.9
arahy.Tifrunner.gnm1.ann1.W7ADHZ Arachis hypogaea HOM05D005539 ORTHO05D006644 2.2e-61 240.7 320 42.2
BcaC06g32273 Brassica carinata HOM05D005539 ORTHO05D006644 2.9e-61 240.4 298 46.0
Lalb_Chr15g0084151 Lupinus albus HOM05D005539 ORTHO05D006644 2.9e-61 240.4 324 42.9
Medtr3g070390 Medicago truncatula HOM05D005539 ORTHO05D006644 3.7e-61 240.0 324 42.6
SGA_v2.0_scaffold76G25107 Striga asiatica HOM05D005539 ORTHO05D006644 3.7e-61 240.0 320 41.9
Ca_15119_v3 Cicer arietinum L. HOM05D005539 ORTHO05D006644 1.1e-60 238.4 323 41.8
arahy.Tifrunner.gnm1.ann1.4ME2IF Arachis hypogaea HOM05D005539 ORTHO05D006644 1.9e-60 237.7 320 41.9
ATR0193G007 Amborella trichopoda HOM05D005539 ORTHO05D006644 6.6e-58 229.2 243 49.8
SEGI_27471 Sequoiadendron giganteum HOM05D005539 ORTHO05D006644 8.6e-58 228.8 115 100.0
Pp3c6_24520 Physcomitrium patens HOM05D005539 ORTHO05D006644 1.5e-57 228.0 248 50.0
Actinidia29697 Actinidia chinensis HOM05D005539 ORTHO05D006644 2.5e-57 227.3 250 49.6
Sed0009998 Sechium edule HOM05D005539 ORTHO05D006644 2.1e-56 224.2 322 39.8
CsaV3_5G010080 Cucumis sativus L. HOM05D005539 ORTHO05D006644 6.2e-56 222.6 325 40.3
MELO3C025184.2 Cucumis melo HOM05D005539 ORTHO05D006644 1.4e-55 221.5 327 39.1
HPP92_019887 Vanilla planifolia HOM05D005539 ORTHO05D006644 1.1e-52 211.8 330 38.2
Os04g0608400 Oryza sativa ssp. japonica HOM05D005539 ORTHO05D006644 4.1e-52 209.9 288 39.2
Haze_17219 Corylus avellana HOM05D005539 ORTHO05D006644 5.1e-50 203.0 353 39.9
vmacro10051 Vaccinium macrocarpon HOM05D005539 ORTHO05D006644 6.6e-50 202.6 297 43.1
Zm00001eb430560 Zea mays HOM05D005539 ORTHO05D006644 4.3e-49 199.9 271 41.7
ClCG07G004120 Citrullus lanatus HOM05D005539 ORTHO05D006644 2.3e-47 194.1 259 39.8
Actinidia33928 Actinidia chinensis HOM05D005539 ORTHO05D006644 4.4e-46 189.9 320 37.5
CBR_g22013 Chara braunii HOM05D005539 ORTHO05D006644 2.2e-45 187.6 367 37.1
Solyc11g008110.1 Solanum lycopersicum HOM05D005539 ORTHO05D006644 9.2e-44 182.2 194 52.1
Glyma.18G028167 Glycine max HOM05D005539 ORTHO05D006644 3.3e-41 173.7 235 40.0
CDE04G3215 Ceratophyllum demersum HOM05D005539 ORTHO05D006644 4.7e-40 169.9 228 39.9
Ah.04g164520 Amaranthus hybridus HOM05D005539 ORTHO05D006644 1.8e-39 167.9 320 34.7
Hma1.2p1_0703F.1_g206540 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 7.8e-35 152.5 206 45.6
Nitab4.5_0000395g0010 Nicotiana tabacum HOM05D005539 ORTHO05D006644 3.0e-34 150.6 303 37.6
BcaC06g32275 Brassica carinata HOM05D005539 ORTHO05D006644 3.6e-32 143.7 158 52.5
CSS0043358 Camellia sinensis var. sinensis HOM05D005539 ORTHO05D006644 4.8e-32 143.3 320 31.6
Solyc11g020180.3 Solanum lycopersicum HOM05D005539 ORTHO05D006644 5.3e-31 139.8 153 52.3
TPR.G2533 Trifolium pratense HOM05D005539 ORTHO05D006644 1.1e-28 132.1 148 48.6
FAN06G5029 Fragaria x ananassa HOM05D005539 ORTHO05D006644 1.4e-28 131.7 148 49.3
unitig_0.g238 Utricularia gibba HOM05D005539 ORTHO05D006644 2.4e-28 131.0 320 30.9
Cfa001325 Carpinus fangiana HOM05D005539 ORTHO05D006644 7.1e-28 129.4 142 51.4
FAN06G2075 Fragaria x ananassa HOM05D005539 ORTHO05D006644 7.1e-28 129.4 147 49.0
FAN10G4325 Fragaria x ananassa HOM05D005539 ORTHO05D006644 7.1e-28 129.4 147 49.0
FAN06G2580 Fragaria x ananassa HOM05D005539 ORTHO05D006644 3.0e-26 124.0 172 38.4
SHI03446 Sapria himalayana HOM05D005539 ORTHO05D006644 1.9e-25 121.3 121 48.8
Cre06.g278900 Chlamydomonas reinhardtii HOM05D005539 ORTHO05D006644 1.4e-12 78.6 374 25.1
Hma1.2p1_0703F.1_g206520 Hydrangea macrophylla HOM05D005539 ORTHO05D006644 5.5e-12 76.6 133 32.3
MD07G1221200 Malus domestica HOM05D005539 ORTHO05D006644 1.2e-11 75.5 127 33.1
Solyc11g020160.2 Solanum lycopersicum HOM05D005539 ORTHO05D006644 2.1e-11 74.7 151 31.8
MCO09G726 Micromonas commoda HOM05D005539 ORTHO05D006644 6.7e-10 69.7 108 33.3


User provided reference genes

Program Settings