Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32974 Sequoiadendron giganteum HOM05D004619 ORTHO05D005738 1.5e-69 266.2 141 100.0
Dinv27905 Davidia involucrata HOM05D004619 ORTHO05D005738 3.7e-28 128.6 98 62.2
Lalb_Chr14g0362511 Lupinus albus HOM05D004619 ORTHO05D005738 1.4e-27 126.7 98 63.3
Actinidia15739 Actinidia chinensis HOM05D004619 ORTHO05D005738 2.4e-27 125.9 98 60.2
Nn8g39783 Nelumbo nucifera HOM05D004619 ORTHO05D005738 2.4e-27 125.9 139 47.5
TAR636G2525 Trochodendron aralioides HOM05D004619 ORTHO05D005738 2.4e-27 125.9 139 48.9
ATR0705G091 Amborella trichopoda HOM05D004619 ORTHO05D005738 4.1e-27 125.2 98 62.2
Lj8A581G22 Lonicera japonica HOM05D004619 ORTHO05D005738 5.3e-27 124.8 98 59.2
Aqoxy7G03899 Aquilegia oxysepala HOM05D004619 ORTHO05D005738 9.1e-27 124.0 98 63.3
CSS0016966 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 1.5e-26 123.2 98 60.2
Lj1g0001172 Lotus japonicus HOM05D004619 ORTHO05D005738 1.5e-26 123.2 98 60.2
CSS0048446 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 2.6e-26 122.5 98 60.2
CiPaw.07G204000 Carya illinoinensis HOM05D004619 ORTHO05D005738 3.4e-26 122.1 98 62.2
Hma1.2p1_0049F.1_g028570 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 3.4e-26 122.1 98 59.2
Hma1.2p1_0049F.1_g028580 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 3.4e-26 122.1 98 59.2
arahy.Tifrunner.gnm1.ann1.Z9IJD2 Arachis hypogaea HOM05D004619 ORTHO05D005738 4.5e-26 121.7 98 61.2
Medtr1g006690 Medicago truncatula HOM05D004619 ORTHO05D005738 4.5e-26 121.7 98 60.2
Thecc.09G045500 Theobroma cacao HOM05D004619 ORTHO05D005738 4.5e-26 121.7 98 61.2
arahy.Tifrunner.gnm1.ann1.CES4LM Arachis hypogaea HOM05D004619 ORTHO05D005738 5.9e-26 121.3 98 61.2
Nitab4.5_0003794g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 5.9e-26 121.3 98 59.2
FvH4_2g35520 Fragaria vesca HOM05D004619 ORTHO05D005738 1.0e-25 120.6 134 50.7
FAN27G0819 Fragaria x ananassa HOM05D004619 ORTHO05D005738 1.0e-25 120.6 134 50.7
Ciclev10007610m.g Citrus clementina HOM05D004619 ORTHO05D005738 1.3e-25 120.2 98 61.2
Lsat_1_v5_gn_6_23120 Lactuca sativa HOM05D004619 ORTHO05D005738 1.3e-25 120.2 95 60.0
Nitab4.5_0001515g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 1.7e-25 119.8 98 58.2
Psat6g038280 Pisum sativum HOM05D004619 ORTHO05D005738 1.7e-25 119.8 98 59.2
DCAR_004468 Daucus carota HOM05D004619 ORTHO05D005738 2.2e-25 119.4 98 58.2
PSO210G5473 Papaver somniferum HOM05D004619 ORTHO05D005738 2.2e-25 119.4 98 59.2
CDE02G4285 Ceratophyllum demersum HOM05D004619 ORTHO05D005738 2.9e-25 119.0 98 56.1
PSO210G6185 Papaver somniferum HOM05D004619 ORTHO05D005738 2.9e-25 119.0 98 58.2
Atru.chr7.2086 Acer truncatum HOM05D004619 ORTHO05D005738 6.5e-25 117.9 98 59.2
Ca_12754_v3 Cicer arietinum L. HOM05D004619 ORTHO05D005738 6.5e-25 117.9 98 58.2
Duzib168G0872 Durio zibethinus HOM05D004619 ORTHO05D005738 6.5e-25 117.9 98 60.2
Cfa013367 Carpinus fangiana HOM05D004619 ORTHO05D005738 8.5e-25 117.5 136 50.0
Glyma.17G193800 Glycine max HOM05D004619 ORTHO05D005738 8.5e-25 117.5 98 57.1
Phvul.001G074000 Phaseolus vulgaris HOM05D004619 ORTHO05D005738 8.5e-25 117.5 98 58.2
TPR.G24498 Trifolium pratense HOM05D004619 ORTHO05D005738 8.5e-25 117.5 98 56.1
Prupe.1G448000 Prunus persica HOM05D004619 ORTHO05D005738 1.1e-24 117.1 98 59.2
GSVIVG01035621001 Vitis vinifera HOM05D004619 ORTHO05D005738 1.1e-24 117.1 98 58.2
COL.COLO4_20972 Corchorus olitorius HOM05D004619 ORTHO05D005738 1.4e-24 116.7 98 60.2
MBI01_g18389_MAGBIO Magnolia biondii HOM05D004619 ORTHO05D005738 1.4e-24 116.7 98 59.2
ClCG08G012210 Citrullus lanatus HOM05D004619 ORTHO05D005738 1.9e-24 116.3 98 56.1
MD15G1093200 Malus domestica HOM05D004619 ORTHO05D005738 1.9e-24 116.3 129 51.2
Peaxi162Scf00227g00812 Petunia axillaris HOM05D004619 ORTHO05D005738 1.9e-24 116.3 98 57.1
Sc23g0005210 Simmondsia chinensis HOM05D004619 ORTHO05D005738 1.9e-24 116.3 98 56.1
HanXRQChr13g0402061 Helianthus annuus HOM05D004619 ORTHO05D005738 2.5e-24 115.9 98 58.2
CANSAT25G1337 Cannabis sativa HOM05D004619 ORTHO05D005738 3.2e-24 115.5 98 57.1
ECA233G0099 Erigeron canadensis HOM05D004619 ORTHO05D005738 3.2e-24 115.5 98 55.1
CAN.G400.8 Capsicum annuum HOM05D004619 ORTHO05D005738 4.2e-24 115.2 98 56.1
Rhsim07G0146900 Rhododendron simsii HOM05D004619 ORTHO05D005738 4.2e-24 115.2 98 56.1
Solyc08g066580.4 Solanum lycopersicum HOM05D004619 ORTHO05D005738 4.2e-24 115.2 98 57.1
VMungo0647G0418 Vigna mungo HOM05D004619 ORTHO05D005738 4.2e-24 115.2 98 57.1
QL12p041325 Quercus lobata HOM05D004619 ORTHO05D005738 5.5e-24 114.8 98 59.2
Hund19512 Selenicereus undatus HOM05D004619 ORTHO05D005738 5.5e-24 114.8 99 57.6
Eucgr.C00551 Eucalyptus grandis HOM05D004619 ORTHO05D005738 7.2e-24 114.4 98 58.2
Oeu031693.1 Olea europaea HOM05D004619 ORTHO05D005738 9.4e-24 114.0 97 57.7
AagrBONN_evm.TU.Sc2ySwM_368.2349 Anthoceros agrestis HOM05D004619 ORTHO05D005738 1.2e-23 113.6 98 57.1
AT4G32910 Arabidopsis thaliana HOM05D004619 ORTHO05D005738 1.2e-23 113.6 98 56.1
EL10Ac2g04016 Beta vulgaris HOM05D004619 ORTHO05D005738 1.2e-23 113.6 98 56.1
MELO3C011139.2 Cucumis melo HOM05D004619 ORTHO05D005738 1.2e-23 113.6 98 55.1
RcHm_v2.0_Chr6g0306261 Rosa chinensis HOM05D004619 ORTHO05D005738 1.2e-23 113.6 134 49.3
Cc08_g09590 Coffea canephora HOM05D004619 ORTHO05D005738 1.6e-23 113.2 98 54.1
Potri.018G044300 Populus trichocarpa HOM05D004619 ORTHO05D005738 1.6e-23 113.2 98 56.1
PGR031G0242 Punica granatum HOM05D004619 ORTHO05D005738 1.6e-23 113.2 98 58.2
Sabra18G0044100 Salix brachista HOM05D004619 ORTHO05D005738 1.6e-23 113.2 98 56.1
Sabra18G0044200 Salix brachista HOM05D004619 ORTHO05D005738 1.6e-23 113.2 98 56.1
SGA_v2.0_scaffold169G38654 Striga asiatica HOM05D004619 ORTHO05D005738 2.1e-23 112.8 97 56.7
AUR62039705 Chenopodium quinoa HOM05D004619 ORTHO05D005738 2.7e-23 112.5 98 55.1
Aa31sc131G40 Aethionema arabicum HOM05D004619 ORTHO05D005738 3.6e-23 112.1 98 54.1
Ah.10g035010 Amaranthus hybridus HOM05D004619 ORTHO05D005738 3.6e-23 112.1 98 55.1
Carub.0007s0758 Capsella rubella HOM05D004619 ORTHO05D005738 3.6e-23 112.1 98 56.1
FAN20G0141 Fragaria x ananassa HOM05D004619 ORTHO05D005738 3.6e-23 112.1 145 45.5
Manes.16G075300 Manihot esculenta HOM05D004619 ORTHO05D005738 3.6e-23 112.1 98 57.1
Sopen08g020420 Solanum pennellii HOM05D004619 ORTHO05D005738 3.6e-23 112.1 98 55.1
AL7G18800 Arabidopsis lyrata HOM05D004619 ORTHO05D005738 7.9e-23 110.9 98 56.1
Gohir.D06G092300 Gossypium hirsutum HOM05D004619 ORTHO05D005738 7.9e-23 110.9 98 59.2
Gorai.010G106300 Gossypium raimondii HOM05D004619 ORTHO05D005738 7.9e-23 110.9 98 59.2
Sed0007447 Sechium edule HOM05D004619 ORTHO05D005738 7.9e-23 110.9 98 55.1
CsaV3_2G030840 Cucumis sativus L. HOM05D004619 ORTHO05D005738 1.0e-22 110.5 98 53.1
BcaC09g52091 Brassica carinata HOM05D004619 ORTHO05D005738 1.4e-22 110.2 98 54.1
C01p05790 Brassica napus HOM05D004619 ORTHO05D005738 1.4e-22 110.2 98 54.1
Haze_21890 Corylus avellana HOM05D004619 ORTHO05D005738 1.4e-22 110.2 144 47.2
Eucgr.C00596 Eucalyptus grandis HOM05D004619 ORTHO05D005738 1.4e-22 110.2 98 57.1
BolC1t00559H Brassica oleracea HOM05D004619 ORTHO05D005738 1.8e-22 109.8 96 54.2
THA.LOC104803757 Tarenaya hassleriana HOM05D004619 ORTHO05D005738 1.8e-22 109.8 143 43.4
A01p05370 Brassica napus HOM05D004619 ORTHO05D005738 3.0e-22 109.0 98 53.1
Pp3c16_3750 Physcomitrium patens HOM05D004619 ORTHO05D005738 3.0e-22 109.0 99 53.5
BraA01t00511Z Brassica rapa HOM05D004619 ORTHO05D005738 5.1e-22 108.2 98 53.1
Thhalv10024536m.g Eutrema salsugineum HOM05D004619 ORTHO05D005738 8.8e-22 107.5 98 54.1
SalBow1G6937 Salvia bowleyana HOM05D004619 ORTHO05D005738 1.1e-21 107.1 97 51.5
Os01g0746200 Oryza sativa ssp. japonica HOM05D004619 ORTHO05D005738 1.5e-21 106.7 98 53.1
Migut.E01528 Erythranthe guttata HOM05D004619 ORTHO05D005738 2.0e-21 106.3 97 54.6
MSTRG.1660 Avicennia marina HOM05D004619 ORTHO05D005738 4.4e-21 105.1 97 50.5
Sp7g30680 Schrenkiella parvula HOM05D004619 ORTHO05D005738 4.4e-21 105.1 98 52.0
CARHR240910 Cardamine hirsuta HOM05D004619 ORTHO05D005738 7.4e-21 104.4 99 54.5
HPP92_005572 Vanilla planifolia HOM05D004619 ORTHO05D005738 9.7e-21 104.0 95 52.6
Zm00001eb152980 Zea mays HOM05D004619 ORTHO05D005738 4.8e-20 101.7 98 50.0
Mapoly0014s0066 Marchantia polymorpha HOM05D004619 ORTHO05D005738 1.8e-19 99.8 98 49.0
Gohir.A06G092700 Gossypium hirsutum HOM05D004619 ORTHO05D005738 5.9e-18 94.7 98 54.1
SHI18685 Sapria himalayana HOM05D004619 ORTHO05D005738 5.5e-16 88.2 87 52.9
AUR62009276 Chenopodium quinoa HOM05D004619 ORTHO05D005738 7.2e-16 87.8 65 63.1
Lj5g0023577 Lotus japonicus HOM05D004619 ORTHO05D005738 6.3e-12 74.7 52 71.2
Actinidia14677 Actinidia chinensis HOM05D004619 ORTHO05D005738 2.0e-10 69.7 61 54.1
vmacro05371 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 1.3e-09 67.0 52 59.6
vmacro23276 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 1.3e-09 67.0 52 59.6
BolC6t36187H Brassica oleracea HOM05D004619 ORTHO05D005738 1.7e-09 66.6 89 42.7
BcaC08g43687 Brassica carinata HOM05D004619 ORTHO05D005738 3.8e-09 65.5 57 56.1
FvH4_4g13810 Fragaria vesca HOM05D004619 ORTHO05D005738 1.9e-08 63.2 97 43.3
C09p66170 Brassica napus HOM05D004619 ORTHO05D005738 3.2e-08 62.4 89 42.7
BolC9t59437H Brassica oleracea HOM05D004619 ORTHO05D005738 3.2e-08 62.4 89 42.7
unitig_578.g16587 Utricularia gibba HOM05D004619 ORTHO05D005738 9.4e-08 60.8 51 54.9
A06p44050 Brassica napus HOM05D004619 ORTHO05D005738 2.1e-07 59.7 57 52.6
BraA06t27279Z Brassica rapa HOM05D004619 ORTHO05D005738 2.1e-07 59.7 57 52.6
BcaB03g16865 Brassica carinata HOM05D004619 ORTHO05D005738 1.8e-06 56.6 57 52.6
Lsat_1_v5_gn_8_131800 Lactuca sativa HOM05D003157 ORTHO05D004447 4.0e-06 55.5 35 68.6


User provided reference genes

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