Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32872 Sequoiadendron giganteum HOM05D004869 ORTHO05D005893 1.8e-41 172.2 89 100.0
CANSAT78G0178 Cannabis sativa HOM05D004869 ORTHO05D005893 4.1e-33 144.4 89 80.9
CDE11G0521 Ceratophyllum demersum HOM05D004869 ORTHO05D005893 3.5e-32 141.4 89 77.5
Glyma.15G150900 Glycine max HOM05D004869 ORTHO05D005893 4.5e-32 141.0 89 78.7
HanXRQChr17g0535991 Helianthus annuus HOM05D004869 ORTHO05D005893 5.9e-32 140.6 89 77.5
Phvul.009G250700 Phaseolus vulgaris HOM05D004869 ORTHO05D005893 5.9e-32 140.6 89 78.7
Zm00001eb111400 Zea mays HOM05D004869 ORTHO05D005893 5.9e-32 140.6 89 78.7
Lalb_Chr20g0117401 Lupinus albus HOM05D004869 ORTHO05D005893 1.0e-31 139.8 89 77.5
Lj6g0019427 Lotus japonicus HOM05D004869 ORTHO05D005893 2.2e-31 138.7 89 76.4
Lalb_Chr15g0086081 Lupinus albus HOM05D004869 ORTHO05D005893 2.2e-31 138.7 89 76.4
CiPaw.01G145300 Carya illinoinensis HOM05D004869 ORTHO05D005893 2.9e-31 138.3 89 77.5
Glyma.09G042000 Glycine max HOM05D004869 ORTHO05D005893 2.9e-31 138.3 89 76.4
Pp3c18_21710 Physcomitrium patens HOM05D004869 ORTHO05D005893 2.9e-31 138.3 85 81.2
Sabra10G0006600 Salix brachista HOM05D004869 ORTHO05D005893 3.8e-31 137.9 89 76.4
ATR0693G241 Amborella trichopoda HOM05D004869 ORTHO05D005893 5.0e-31 137.5 89 77.5
arahy.Tifrunner.gnm1.ann1.ZXWI6N Arachis hypogaea HOM05D004869 ORTHO05D005893 5.0e-31 137.5 89 77.5
Ciclev10004291m.g Citrus clementina HOM05D004869 ORTHO05D005893 5.0e-31 137.5 89 77.5
Ciclev10004342m.g Citrus clementina HOM05D004869 ORTHO05D005893 5.0e-31 137.5 89 77.5
Os07g0675000 Oryza sativa ssp. japonica HOM05D004869 ORTHO05D005893 5.0e-31 137.5 89 75.3
THA.LOC104802695 Tarenaya hassleriana HOM05D004869 ORTHO05D005893 5.0e-31 137.5 86 77.9
Migut.N00074 Erythranthe guttata HOM05D004869 ORTHO05D005893 6.5e-31 137.1 89 76.4
Gohir.A02G051000 Gossypium hirsutum HOM05D004869 ORTHO05D005893 6.5e-31 137.1 89 77.5
Gohir.D02G055900 Gossypium hirsutum HOM05D004869 ORTHO05D005893 6.5e-31 137.1 89 77.5
Gorai.005G061800 Gossypium raimondii HOM05D004869 ORTHO05D005893 6.5e-31 137.1 89 77.5
Mapoly0111s0015 Marchantia polymorpha HOM05D004869 ORTHO05D005893 6.5e-31 137.1 87 74.7
Peaxi162Scf00065g01213 Petunia axillaris HOM05D004869 ORTHO05D005893 6.5e-31 137.1 89 77.5
Sopen01g027900 Solanum pennellii HOM05D004869 ORTHO05D005893 6.5e-31 137.1 89 77.5
Thecc.04G289100 Theobroma cacao HOM05D004869 ORTHO05D005893 6.5e-31 137.1 89 76.4
TWI53G1493 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 6.5e-31 137.1 89 77.5
GSVIVG01035107001 Vitis vinifera HOM05D004869 ORTHO05D005893 6.5e-31 137.1 89 76.4
Cfa015427 Carpinus fangiana HOM05D004869 ORTHO05D005893 8.5e-31 136.7 89 76.4
Haze_01165 Corylus avellana HOM05D004869 ORTHO05D005893 8.5e-31 136.7 89 76.4
Duzib212G0051 Durio zibethinus HOM05D004869 ORTHO05D005893 8.5e-31 136.7 89 76.4
Nitab4.5_0008670g0020 Nicotiana tabacum HOM05D004869 ORTHO05D005893 8.5e-31 136.7 89 77.5
Oeu016255.1 Olea europaea HOM05D004869 ORTHO05D005893 8.5e-31 136.7 89 77.5
Potri.010G010448 Populus trichocarpa HOM05D004869 ORTHO05D005893 8.5e-31 136.7 89 76.4
Pp3c22_4180 Physcomitrium patens HOM05D004869 ORTHO05D005893 1.1e-30 136.3 85 80.0
Nitab4.5_0000695g0140 Nicotiana tabacum HOM05D004869 ORTHO05D005893 1.5e-30 136.0 89 76.4
Aqoxy5G00789 Aquilegia oxysepala HOM05D004869 ORTHO05D005893 1.9e-30 135.6 89 76.4
Cpa.g.sc50.161 Carica papaya HOM05D004869 ORTHO05D005893 1.9e-30 135.6 89 75.3
MBI18_g37159_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 1.9e-30 135.6 89 75.3
MBI18_g44774_MAGBIO Magnolia biondii HOM05D004869 ORTHO05D005893 1.9e-30 135.6 89 75.3
Solyc01g066310.4 Solanum lycopersicum HOM05D004869 ORTHO05D005893 1.9e-30 135.6 89 76.4
vmacro08186 Vaccinium macrocarpon HOM05D004869 ORTHO05D005893 1.9e-30 135.6 89 75.3
Atru.chr4.2905 Acer truncatum HOM05D004869 ORTHO05D005893 2.5e-30 135.2 89 75.3
COL.COLO4_13820 Corchorus olitorius HOM05D004869 ORTHO05D005893 2.5e-30 135.2 89 75.3
Lsat_1_v5_gn_3_21560 Lactuca sativa HOM05D004869 ORTHO05D005893 2.5e-30 135.2 89 76.4
HPP92_003120 Vanilla planifolia HOM05D004869 ORTHO05D005893 2.5e-30 135.2 89 73.0
VMungo1309G2596 Vigna mungo HOM05D004869 ORTHO05D005893 2.5e-30 135.2 89 75.3
Potri.008G219000 Populus trichocarpa HOM05D004869 ORTHO05D005893 3.2e-30 134.8 89 75.3
Rhsim04G0226400 Rhododendron simsii HOM05D004869 ORTHO05D005893 3.2e-30 134.8 89 74.2
CARHR081430 Cardamine hirsuta HOM05D004869 ORTHO05D005893 4.2e-30 134.4 86 76.7
Hma1.2p1_1352F.1_g277460 Hydrangea macrophylla HOM05D004869 ORTHO05D005893 4.2e-30 134.4 89 75.3
Solyc05g054370.2 Solanum lycopersicum HOM05D004869 ORTHO05D005893 4.2e-30 134.4 89 77.5
Sopen05g032860 Solanum pennellii HOM05D004869 ORTHO05D005893 4.2e-30 134.4 89 77.5
PGSC0003DMG400023436 Solanum tuberosum HOM05D004869 ORTHO05D005893 4.2e-30 134.4 89 77.5
SGA_v2.0_scaffold119G32706 Striga asiatica HOM05D004869 ORTHO05D005893 4.2e-30 134.4 89 75.3
unitig_26.g10563 Utricularia gibba HOM05D004869 ORTHO05D005893 4.2e-30 134.4 89 75.3
AL3G17930 Arabidopsis lyrata HOM05D004869 ORTHO05D005893 5.5e-30 134.0 86 76.7
AT3G06810 Arabidopsis thaliana HOM05D004869 ORTHO05D005893 5.5e-30 134.0 86 76.7
Carub.0003s0635 Capsella rubella HOM05D004869 ORTHO05D005893 5.5e-30 134.0 86 76.7
Actinidia40299 Actinidia chinensis HOM05D004869 ORTHO05D005893 7.2e-30 133.7 89 76.4
ECA246G3101 Erigeron canadensis HOM05D004869 ORTHO05D005893 7.2e-30 133.7 89 75.3
PSO832G2232 Papaver somniferum HOM05D004869 ORTHO05D005893 7.2e-30 133.7 89 74.2
Aa31LG5G17400 Aethionema arabicum HOM05D004869 ORTHO05D005893 1.2e-29 132.9 86 75.6
Thhalv10020074m.g Eutrema salsugineum HOM05D004869 ORTHO05D005893 1.2e-29 132.9 86 75.6
Sc19g0005490 Simmondsia chinensis HOM05D004869 ORTHO05D005893 1.2e-29 132.9 89 74.2
Ah.04g153720 Amaranthus hybridus HOM05D004869 ORTHO05D005893 1.6e-29 132.5 89 74.2
Cc03_g01500 Coffea canephora HOM05D004869 ORTHO05D005893 1.6e-29 132.5 89 73.0
Sed0001345 Sechium edule HOM05D004869 ORTHO05D005893 1.6e-29 132.5 89 71.9
BcaC05g30559 Brassica carinata HOM05D004869 ORTHO05D005893 2.1e-29 132.1 86 75.6
BcaNung06666 Brassica carinata HOM05D004869 ORTHO05D005893 2.1e-29 132.1 86 75.6
A05p41290 Brassica napus HOM05D004869 ORTHO05D005893 2.1e-29 132.1 86 75.6
C05p60510 Brassica napus HOM05D004869 ORTHO05D005893 2.1e-29 132.1 86 75.6
BolC5t34705H Brassica oleracea HOM05D004869 ORTHO05D005893 2.1e-29 132.1 86 75.6
BraA05t22852Z Brassica rapa HOM05D004869 ORTHO05D005893 2.1e-29 132.1 86 75.6
Prupe.1G131800 Prunus persica HOM05D004869 ORTHO05D005893 2.1e-29 132.1 89 73.0
EL10Ac3g06663 Beta vulgaris HOM05D004869 ORTHO05D005893 2.7e-29 131.7 89 74.2
MD13G1164300 Malus domestica HOM05D004869 ORTHO05D005893 2.7e-29 131.7 89 73.0
Manes.03G198800 Manihot esculenta HOM05D004869 ORTHO05D005893 2.7e-29 131.7 89 74.2
PSO210G1050 Papaver somniferum HOM05D004869 ORTHO05D005893 2.7e-29 131.7 89 71.9
QL06p010392 Quercus lobata HOM05D004869 ORTHO05D005893 3.6e-29 131.3 88 72.7
TWI73G0801 Tripterygium wilfordii HOM05D004869 ORTHO05D005893 3.6e-29 131.3 89 73.0
TAR365G0733 Trochodendron aralioides HOM05D004869 ORTHO05D005893 3.6e-29 131.3 89 73.0
Ca_01910_v3 Cicer arietinum L. HOM05D004869 ORTHO05D005893 4.7e-29 131.0 89 73.0
MELO3C006684.2 Cucumis melo HOM05D004869 ORTHO05D005893 4.7e-29 131.0 89 73.0
Lj6A681T39 Lonicera japonica HOM05D004869 ORTHO05D005893 4.7e-29 131.0 89 73.0
MD16G1164100 Malus domestica HOM05D004869 ORTHO05D005893 4.7e-29 131.0 89 73.0
ClCG05G006260 Citrullus lanatus HOM05D004869 ORTHO05D005893 6.1e-29 130.6 89 71.9
CsaV3_3G014880 Cucumis sativus L. HOM05D004869 ORTHO05D005893 8.0e-29 130.2 89 71.9
Sp3g05780 Schrenkiella parvula HOM05D004869 ORTHO05D005893 8.0e-29 130.2 86 74.4
Hund20507 Selenicereus undatus HOM05D004869 ORTHO05D005893 8.0e-29 130.2 89 73.0
AUR62015247 Chenopodium quinoa HOM05D004869 ORTHO05D005893 1.0e-28 129.8 89 71.9
AUR62018045 Chenopodium quinoa HOM05D004869 ORTHO05D005893 1.0e-28 129.8 89 71.9
SMO169G0300 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 1.0e-28 129.8 89 70.8
SMO202G0033 Selaginella moellendorffii HOM05D004869 ORTHO05D005893 1.0e-28 129.8 89 70.8
CAN.G449.73 Capsicum annuum HOM05D004869 ORTHO05D005893 1.4e-28 129.4 89 73.0
TPR.G13211 Trifolium pratense HOM05D004869 ORTHO05D005893 1.4e-28 129.4 87 73.6
FvH4_4g18700 Fragaria vesca HOM05D004869 ORTHO05D005893 2.3e-28 128.6 87 71.3
FAN12G0537 Fragaria x ananassa HOM05D004869 ORTHO05D005893 2.3e-28 128.6 87 71.3
FAN12G1313 Fragaria x ananassa HOM05D004869 ORTHO05D005893 2.3e-28 128.6 87 71.3
FAN17G0377 Fragaria x ananassa HOM05D004869 ORTHO05D005893 2.3e-28 128.6 87 71.3
arahy.Tifrunner.gnm1.ann1.YH0B1H Arachis hypogaea HOM05D004869 ORTHO05D005893 3.0e-28 128.3 80 80.0
DCAR_027053 Daucus carota HOM05D004869 ORTHO05D005893 3.0e-28 128.3 86 74.4
CBR_g54445 Chara braunii HOM05D004869 ORTHO05D005893 4.0e-28 127.9 89 69.7
Lsat_1_v5_gn_3_21640 Lactuca sativa HOM05D004869 ORTHO05D005893 4.0e-28 127.9 89 73.0
Medtr2g436030 Medicago truncatula HOM05D004869 ORTHO05D005893 8.8e-28 126.7 87 73.6
DCAR_000477 Daucus carota HOM05D004869 ORTHO05D005893 1.2e-27 126.3 86 73.3
RcHm_v2.0_Chr4g0423401 Rosa chinensis HOM05D004869 ORTHO05D005893 2.0e-27 125.6 87 70.1
Rhsim04G0225700 Rhododendron simsii HOM05D004869 ORTHO05D005893 1.1e-25 119.8 92 66.3
Dinv44350 Davidia involucrata HOM05D004869 ORTHO05D005893 9.1e-25 116.7 75 76.0
Cre16.g675850 Chlamydomonas reinhardtii HOM05D004869 ORTHO05D005893 2.2e-23 112.1 88 63.6
Rhsim04G0225600 Rhododendron simsii HOM05D004869 ORTHO05D005893 3.2e-22 108.2 82 67.1
MCO01G041 Micromonas commoda HOM05D004869 ORTHO05D005893 1.6e-21 105.9 86 61.6
Rhsim04G0226200 Rhododendron simsii HOM05D004869 ORTHO05D005893 2.7e-21 105.1 67 76.1
BNapus_Darmor_BZH_scaffold_117p00100 Brassica napus HOM05D004869 ORTHO05D005893 6.8e-20 100.5 73 68.5
BolC1t05585H Brassica oleracea HOM05D004869 ORTHO05D005893 8.8e-20 100.1 65 76.9
PRCOL_00002960 Prasinoderma coloniale HOM05D004869 ORTHO05D005893 8.8e-20 100.1 91 59.3
PGSC0003DMG400027831 Solanum tuberosum HOM05D004869 ORTHO05D005893 1.2e-19 99.8 59 81.4
SalBow5G3485 Salvia bowleyana HOM05D004869 ORTHO05D005893 5.9e-16 87.4 59 74.6
BcaC09g47921 Brassica carinata HOM05D004869 ORTHO05D005893 7.7e-16 87.0 57 75.4
Cfa024444 Carpinus fangiana HOM05D004869 ORTHO05D005893 1.8e-12 75.9 85 47.1
Cfa022681 Carpinus fangiana HOM05D004869 ORTHO05D005893 6.8e-12 73.9 88 43.2
CSS0035117 Camellia sinensis var. sinensis HOM05D004869 ORTHO05D005893 1.2e-08 63.2 58 60.3


User provided reference genes

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