Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 3.8e-108 394.8 195 100.0
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 2.9e-55 219.2 106 100.0
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.7e-36 156.8 361 30.7
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 3.9e-36 155.6 370 30.0
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 3.6e-34 149.1 370 28.9
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 8.1e-34 147.9 373 28.7
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 1.4e-33 147.1 370 28.4
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 2.4e-33 146.4 407 28.5
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 1.5e-32 143.7 408 27.7
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 2.0e-32 143.3 411 27.7
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 2.0e-32 143.3 411 27.7
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 4.4e-32 142.1 391 27.6
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 7.6e-32 141.4 411 27.7
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 9.9e-32 141.0 400 28.0
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 1.3e-31 140.6 391 27.6
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 1.3e-31 140.6 411 27.7
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 1.7e-31 140.2 415 27.0
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 2.2e-31 139.8 414 27.8
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 2.2e-31 139.8 411 27.5
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 2.2e-31 139.8 410 27.6
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 2.9e-31 139.4 414 26.8
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 2.4e-30 136.3 412 27.2
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 2.4e-30 136.3 399 28.3
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.2e-30 136.0 393 27.0
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 3.2e-30 136.0 416 26.7
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 5.4e-30 135.2 417 26.9
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 7.1e-30 134.8 229 36.7
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 2.1e-29 133.3 407 27.3
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 6.0e-29 131.7 404 26.7
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 7.8e-29 131.3 409 26.7
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 1.0e-28 131.0 399 26.8
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 1.7e-28 130.2 89 66.3
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 2.3e-28 129.8 411 26.3
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 2.3e-28 129.8 431 26.7
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 3.0e-28 129.4 415 27.0
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 5.1e-28 128.6 401 26.9
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 6.6e-28 128.3 85 70.6
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 6.6e-28 128.3 416 26.7
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 8.7e-28 127.9 434 25.6
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 1.1e-27 127.5 90 64.4
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 1.1e-27 127.5 86 67.4
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.5e-27 127.1 405 27.2
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.5e-27 127.1 408 27.0
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 1.5e-27 127.1 416 26.2
Thecc.01G362500 Theobroma cacao HOM05D005745 ORTHO05D006857 1.5e-27 127.1 86 67.4
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 1.9e-27 126.7 410 26.6
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.9e-27 126.7 407 27.0
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 1.9e-27 126.7 85 69.4
Glyma.03G013550 Glycine max HOM05D005745 ORTHO05D006857 1.9e-27 126.7 92 63.0
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 1.9e-27 126.7 85 69.4
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 2.5e-27 126.3 417 25.4
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 2.5e-27 126.3 85 69.4
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 2.5e-27 126.3 449 25.4
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 3.3e-27 125.9 401 25.9
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 3.3e-27 125.9 85 65.9
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 4.3e-27 125.6 83 71.1
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 4.3e-27 125.6 83 68.7
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 4.3e-27 125.6 429 25.6
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 5.6e-27 125.2 85 69.4
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 5.6e-27 125.2 86 67.4
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 5.6e-27 125.2 82 72.0
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 7.3e-27 124.8 90 67.8
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 7.3e-27 124.8 88 65.9
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 9.6e-27 124.4 85 70.6
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 9.6e-27 124.4 418 25.6
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 9.6e-27 124.4 85 67.1
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 1.6e-26 123.6 85 69.4
Oeu056356.1 Olea europaea HOM05D005745 ORTHO05D006857 2.1e-26 123.2 93 64.5
Oeu056357.1 Olea europaea HOM05D005745 ORTHO05D006857 2.1e-26 123.2 86 69.8
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 2.1e-26 123.2 86 69.8
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 2.8e-26 122.9 85 65.9
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 2.8e-26 122.9 85 65.9
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 2.8e-26 122.9 86 66.3
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 4.8e-26 122.1 416 26.0
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 6.2e-26 121.7 86 68.6
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 1.1e-25 120.9 86 68.6
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 1.4e-25 120.6 90 67.8
FAN06G0933 Fragaria x ananassa HOM05D005745 ORTHO05D006857 1.4e-25 120.6 85 68.2
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 1.4e-25 120.6 121 57.0
TPR.G4413 Trifolium pratense HOM05D005745 ORTHO05D006857 1.4e-25 120.6 90 64.4
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 2.4e-25 119.8 410 25.4
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 2.4e-25 119.8 85 64.7
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 4.0e-25 119.0 391 25.6
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 5.3e-25 118.6 321 29.6
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 6.9e-25 118.2 85 67.1
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 1.2e-24 117.5 415 25.8
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 1.2e-24 117.5 83 67.5
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 1.5e-24 117.1 88 60.2
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 1.5e-24 117.1 419 25.1
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 4.5e-24 115.5 413 24.5
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 4.5e-24 115.5 88 61.4
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 4.5e-24 115.5 88 61.4
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 5.8e-24 115.2 366 27.9
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 7.6e-24 114.8 88 61.4
SHI13462 Sapria himalayana HOM05D005745 ORTHO05D006857 7.6e-24 114.8 85 60.0
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 7.6e-24 114.8 85 64.7
EL10Ac7g17708 Beta vulgaris HOM05D005745 ORTHO05D006857 1.3e-23 114.0 85 63.5
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 2.2e-23 113.2 85 58.8
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 2.9e-23 112.8 113 53.1
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 4.9e-23 112.1 367 26.2
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 4.9e-23 112.1 82 67.1
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 1.9e-22 110.2 115 47.8
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 2.4e-22 109.8 413 24.7
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 1.6e-21 107.1 103 50.5
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 1.6e-21 107.1 115 44.3
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 3.5e-21 105.9 83 60.2
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 4.6e-21 105.5 102 51.0
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 7.9e-21 104.8 103 52.4
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 7.9e-21 104.8 88 58.0
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 1.8e-20 103.6 102 53.9
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 1.8e-20 103.6 102 51.0
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 1.8e-20 103.6 115 44.3
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 3.0e-20 102.8 102 50.0
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 5.1e-20 102.1 102 53.9
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 5.1e-20 102.1 102 53.9
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 6.7e-20 101.7 103 51.5
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 1.9e-19 100.1 102 48.0
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 1.8e-17 93.6 87 58.6
FAN01G0854 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.4e-16 89.4 108 49.1
MCO02G004 Micromonas commoda HOM05D005745 ORTHO05D006857 2.9e-15 86.3 91 53.8
Cre14.g629283 Chlamydomonas reinhardtii HOM05D005745 ORTHO05D006857 3.2e-14 82.8 126 44.4
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.5e-14 82.0 72 56.9
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 4.6e-13 79.0 65 63.1
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 1.8e-12 77.0 164 32.3
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 6.7e-12 75.1 98 48.0
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 8.7e-12 74.7 69 56.5
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 1.1e-11 74.3 52 71.2
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 5.6e-11 72.0 51 68.6
PRCOL_00000230 Prasinoderma coloniale HOM05D005745 ORTHO05D006857 2.6e-08 63.2 95 42.1


User provided reference genes

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