Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32011 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 2.0e-135 485.7 240 100.0
SEGI_32349 Sequoiadendron giganteum HOM05D005745 ORTHO05D006857 2.7e-55 219.5 106 100.0
Dinv43791 Davidia involucrata HOM05D005745 ORTHO05D006857 1.6e-47 193.7 264 42.8
Hma1.2p1_0001F.1_g001520 Hydrangea macrophylla HOM05D005745 ORTHO05D006857 1.3e-46 190.7 194 50.5
Cpa.g.sc18.234 Carica papaya HOM05D005745 ORTHO05D006857 1.9e-45 186.8 194 50.0
TAR367G0002 Trochodendron aralioides HOM05D005745 ORTHO05D006857 1.9e-45 186.8 194 49.0
GSVIVG01026870001 Vitis vinifera HOM05D005745 ORTHO05D006857 2.5e-45 186.4 194 50.5
QL08p049437 Quercus lobata HOM05D005745 ORTHO05D006857 9.6e-45 184.5 194 51.0
Actinidia20926 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.1e-44 183.3 194 49.5
CSS0038489 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 2.1e-44 183.3 194 49.0
Actinidia10034 Actinidia chinensis HOM05D005745 ORTHO05D006857 2.8e-44 183.0 194 49.0
VMungo0331G1900 Vigna mungo HOM05D005745 ORTHO05D006857 2.8e-44 183.0 193 50.8
MBI17_g21972_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 3.7e-44 182.6 195 50.3
Medtr8g031440 Medicago truncatula HOM05D005745 ORTHO05D006857 6.2e-44 181.8 193 50.8
Sabra14G0059300 Salix brachista HOM05D005745 ORTHO05D006857 1.4e-43 180.6 193 51.3
Nn6g33496 Nelumbo nucifera HOM05D005745 ORTHO05D006857 2.4e-43 179.9 195 50.3
Hund27291 Selenicereus undatus HOM05D005745 ORTHO05D006857 2.4e-43 179.9 193 48.2
FAN06G1549 Fragaria x ananassa HOM05D005745 ORTHO05D006857 3.1e-43 179.5 194 47.9
Gohir.A12G105400 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.1e-43 179.5 278 40.3
Gohir.A12G105450 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.1e-43 179.5 278 40.3
CSS0024424 Camellia sinensis var. sinensis HOM05D005745 ORTHO05D006857 4.0e-43 179.1 194 47.9
Ciclev10020429m.g Citrus clementina HOM05D005745 ORTHO05D006857 4.0e-43 179.1 186 53.2
PGSC0003DMG400021653 Solanum tuberosum HOM05D005745 ORTHO05D006857 6.9e-43 178.3 196 49.5
Sopen05g028140 Solanum pennellii HOM05D005745 ORTHO05D006857 9.0e-43 177.9 196 49.0
FvH4_7g13861 Fragaria vesca HOM05D005745 ORTHO05D006857 1.2e-42 177.6 194 47.4
Gorai.008G118400 Gossypium raimondii HOM05D005745 ORTHO05D006857 1.2e-42 177.6 278 39.9
Ca_23656_v3 Cicer arietinum L. HOM05D005745 ORTHO05D006857 2.6e-42 176.4 194 49.0
Glyma.03G013600 Glycine max HOM05D005745 ORTHO05D006857 2.6e-42 176.4 193 49.2
Gohir.D12G109300 Gossypium hirsutum HOM05D005745 ORTHO05D006857 3.4e-42 176.0 281 39.5
FAN10G4182 Fragaria x ananassa HOM05D005745 ORTHO05D006857 4.5e-42 175.6 194 46.4
Psat4g154320 Pisum sativum HOM05D005745 ORTHO05D006857 5.8e-42 175.3 193 49.7
CiPaw.02G029400 Carya illinoinensis HOM05D005745 ORTHO05D006857 7.6e-42 174.9 194 47.9
Solyc05g048810.4 Solanum lycopersicum HOM05D005745 ORTHO05D006857 7.6e-42 174.9 196 48.5
SGA_v2.0_scaffold277G46666 Striga asiatica HOM05D005745 ORTHO05D006857 1.3e-41 174.1 194 49.5
CAN.G1535.1 Capsicum annuum HOM05D005745 ORTHO05D006857 1.7e-41 173.7 196 46.9
TPR.G39633 Trifolium pratense HOM05D005745 ORTHO05D006857 1.7e-41 173.7 193 49.2
AUR62033312 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.2e-41 173.3 194 46.9
MD01G1055100 Malus domestica HOM05D005745 ORTHO05D006857 2.2e-41 173.3 193 47.2
Nitab4.5_0002262g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 2.2e-41 173.3 229 42.8
Phvul.010G096200 Phaseolus vulgaris HOM05D005745 ORTHO05D006857 2.2e-41 173.3 194 49.0
Cc02_g37770 Coffea canephora HOM05D005745 ORTHO05D006857 2.9e-41 172.9 193 48.7
Lj3g0021692 Lotus japonicus HOM05D005745 ORTHO05D006857 2.9e-41 172.9 193 47.7
Mapoly0023s0060 Marchantia polymorpha HOM05D005745 ORTHO05D006857 3.8e-41 172.6 212 46.7
AUR62033347 Chenopodium quinoa HOM05D005745 ORTHO05D006857 1.1e-40 171.0 193 46.6
Nitab4.5_0007346g0010 Nicotiana tabacum HOM05D005745 ORTHO05D006857 1.1e-40 171.0 196 47.4
arahy.Tifrunner.gnm1.ann1.5YG8M2 Arachis hypogaea HOM05D005745 ORTHO05D006857 2.4e-40 169.9 194 46.4
arahy.Tifrunner.gnm1.ann1.JLYP5G Arachis hypogaea HOM05D005745 ORTHO05D006857 4.2e-40 169.1 194 46.9
CANSAT56G0536 Cannabis sativa HOM05D005745 ORTHO05D006857 4.2e-40 169.1 196 50.0
Lalb_Chr04g0256771 Lupinus albus HOM05D005745 ORTHO05D006857 4.2e-40 169.1 193 47.7
RcHm_v2.0_Chr1g0354081 Rosa chinensis HOM05D005745 ORTHO05D006857 4.2e-40 169.1 194 46.9
EL10Ac1g00543 Beta vulgaris HOM05D005745 ORTHO05D006857 5.5e-40 168.7 193 47.2
MSTRG.17255 Avicennia marina HOM05D005745 ORTHO05D006857 9.3e-40 167.9 194 47.4
vmacro13297 Vaccinium macrocarpon HOM05D005745 ORTHO05D006857 9.3e-40 167.9 201 46.8
Aqoxy7G00357 Aquilegia oxysepala HOM05D005745 ORTHO05D006857 1.2e-39 167.5 195 47.2
Manes.01G259400 Manihot esculenta HOM05D005745 ORTHO05D006857 1.2e-39 167.5 194 47.9
Peaxi162Scf00191g01322 Petunia axillaris HOM05D005745 ORTHO05D006857 7.9e-39 164.9 196 45.4
CARHR000560 Cardamine hirsuta HOM05D005745 ORTHO05D006857 1.3e-38 164.1 193 47.2
TWI23G0914 Tripterygium wilfordii HOM05D005745 ORTHO05D006857 1.3e-38 164.1 227 41.9
PSO478G4474 Papaver somniferum HOM05D005745 ORTHO05D006857 1.8e-38 163.7 193 46.6
Lalb_Chr10g0097191 Lupinus albus HOM05D005745 ORTHO05D006857 2.3e-38 163.3 195 46.7
Aa31LG1G11130 Aethionema arabicum HOM05D005745 ORTHO05D006857 5.1e-38 162.2 193 46.6
AUR62004330 Chenopodium quinoa HOM05D005745 ORTHO05D006857 5.1e-38 162.2 189 45.5
ATR0594G105 Amborella trichopoda HOM05D005745 ORTHO05D006857 6.7e-38 161.8 195 46.2
Carub.0001s0045 Capsella rubella HOM05D005745 ORTHO05D006857 2.5e-37 159.8 187 44.9
CDE06G1611 Ceratophyllum demersum HOM05D005745 ORTHO05D006857 2.5e-37 159.8 258 37.2
PSO782G5186 Papaver somniferum HOM05D005745 ORTHO05D006857 3.3e-37 159.5 193 45.1
PGR042G0923 Punica granatum HOM05D005745 ORTHO05D006857 4.3e-37 159.1 194 43.8
Sp1g00540 Schrenkiella parvula HOM05D005745 ORTHO05D006857 4.3e-37 159.1 193 47.2
BcaB03g13612 Brassica carinata HOM05D005745 ORTHO05D006857 5.6e-37 158.7 193 46.1
Zm00001eb420790 Zea mays HOM05D005745 ORTHO05D006857 5.6e-37 158.7 193 47.2
BraA10t42305Z Brassica rapa HOM05D005745 ORTHO05D006857 9.6e-37 157.9 193 44.0
CiPaw.02G029100 Carya illinoinensis HOM05D005745 ORTHO05D006857 9.6e-37 157.9 194 45.4
C05p00290 Brassica napus HOM05D005745 ORTHO05D006857 1.3e-36 157.5 193 45.1
BolC5t28819H Brassica oleracea HOM05D005745 ORTHO05D006857 1.3e-36 157.5 193 45.1
Cfa003949 Carpinus fangiana HOM05D000683 ORTHO05D000507 1.3e-36 157.5 160 53.1
Lsat_1_v5_gn_7_5060 Lactuca sativa HOM05D005745 ORTHO05D006857 1.3e-36 157.5 191 46.6
A10p00280 Brassica napus HOM05D005745 ORTHO05D006857 1.6e-36 157.1 193 45.1
AL1G10580 Arabidopsis lyrata HOM05D005745 ORTHO05D006857 2.1e-36 156.8 188 45.7
Oeu056358.1 Olea europaea HOM05D005745 ORTHO05D006857 2.1e-36 156.8 161 51.6
Thhalv10007725m.g Eutrema salsugineum HOM05D005745 ORTHO05D006857 3.7e-36 156.0 193 45.6
MBI18_g01486_MAGBIO Magnolia biondii HOM05D005745 ORTHO05D006857 4.8e-36 155.6 185 45.4
Haze_15472 Corylus avellana HOM05D005745 ORTHO05D006857 8.2e-36 154.8 160 52.5
DCAR_015932 Daucus carota HOM05D005745 ORTHO05D006857 1.1e-35 154.5 194 45.4
ECA236G3051 Erigeron canadensis HOM05D005745 ORTHO05D006857 1.1e-35 154.5 191 47.1
Eucgr.E00173 Eucalyptus grandis HOM05D005745 ORTHO05D006857 3.1e-35 152.9 194 42.3
Eucgr.E00169 Eucalyptus grandis HOM05D005745 ORTHO05D006857 9.0e-35 151.4 194 42.3
Ah.05g176680 Amaranthus hybridus HOM05D005745 ORTHO05D006857 2.0e-34 150.2 248 38.3
AUR62003100 Chenopodium quinoa HOM05D005745 ORTHO05D006857 2.6e-34 149.8 163 47.2
Sc26g0000960 Simmondsia chinensis HOM05D005745 ORTHO05D006857 2.6e-34 149.8 187 43.9
Zm00001eb067600 Zea mays HOM05D005745 ORTHO05D006857 2.6e-34 149.8 193 45.6
CsaV3_6G000430 Cucumis sativus L. HOM05D005745 ORTHO05D006857 7.6e-34 148.3 194 44.3
Rhsim07G0017300 Rhododendron simsii HOM05D000683 ORTHO05D000507 2.2e-33 146.7 161 51.6
AT1G01760 Arabidopsis thaliana HOM05D005745 ORTHO05D006857 8.4e-33 144.8 161 47.2
Potri.014G081400 Populus trichocarpa HOM05D005745 ORTHO05D006857 2.5e-32 143.3 129 59.7
ClCG06G003860 Citrullus lanatus HOM05D005745 ORTHO05D006857 3.2e-32 142.9 162 51.2
THA.LOC104817020 Tarenaya hassleriana HOM05D005745 ORTHO05D006857 7.1e-32 141.7 160 48.1
Pp3c4_14060 Physcomitrium patens HOM05D005745 ORTHO05D006857 1.2e-31 141.0 228 39.9
AUR62034353 Chenopodium quinoa HOM05D005745 ORTHO05D006857 7.9e-31 138.3 160 45.6
Sed0009525 Sechium edule HOM05D005745 ORTHO05D006857 1.1e-29 134.4 131 57.3
Lj7C516G5 Lonicera japonica HOM05D005745 ORTHO05D006857 3.3e-29 132.9 133 55.6
Zm00001eb191880 Zea mays HOM05D009386 ORTHO05D006857 9.7e-29 131.3 143 51.0
AagrBONN_evm.TU.Sc2ySwM_362.160 Anthoceros agrestis HOM05D005745 ORTHO05D006857 1.6e-28 130.6 132 49.2
Duzib138G1514 Durio zibethinus HOM05D005745 ORTHO05D006857 1.6e-28 130.6 131 55.7
CiPaw.02G029200 Carya illinoinensis HOM05D005745 ORTHO05D006857 1.1e-27 127.9 136 51.5
Zm00001eb442120 Zea mays HOM05D009386 ORTHO05D006857 1.8e-27 127.1 125 53.6
SMO266G0032 Selaginella moellendorffii HOM05D005745 ORTHO05D006857 1.5e-26 124.0 189 43.4
HanXRQChr04g0121611 Helianthus annuus HOM05D005745 ORTHO05D006857 3.4e-26 122.9 131 51.9
MELO3C021221.2 Cucumis melo HOM05D005745 ORTHO05D006857 1.7e-25 120.6 133 47.4
HPP92_001499 Vanilla planifolia HOM05D005745 ORTHO05D006857 1.9e-24 117.1 160 39.4
AUR62019766 Chenopodium quinoa HOM05D005745 ORTHO05D006857 3.2e-24 116.3 113 48.7
unitig_26.g9734 Utricularia gibba HOM05D005745 ORTHO05D006857 5.5e-24 115.5 130 55.4
Atru.BG.56.p Acer truncatum HOM05D005745 ORTHO05D006857 3.0e-22 109.8 131 49.6
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 3.3e-21 106.3 134 41.8
FAN03G1898 Fragaria x ananassa HOM05D005745 ORTHO05D006857 8.2e-20 101.7 194 32.5
Prupe.2G164800 Prunus persica HOM05D005745 ORTHO05D006857 1.1e-11 74.7 92 45.7
Glyma.07G073300 Glycine max HOM05D005745 ORTHO05D006857 1.4e-11 74.3 92 48.9
COL.COLO4_12683 Corchorus olitorius HOM05D000683 ORTHO05D000507 1.8e-11 73.9 52 63.5
Os04g0683500 Oryza sativa ssp. japonica HOM05D005745 ORTHO05D006857 7.7e-10 68.6 91 40.7
AUR62034238 Chenopodium quinoa HOM05D002177 ORTHO05D002257 3.8e-09 66.2 78 41.0
Prupe.2G165000 Prunus persica HOM05D005745 ORTHO05D006857 2.1e-07 60.5 260 23.8


User provided reference genes

Program Settings