Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_29406 Sequoiadendron giganteum HOM05D006818 ORTHO05D008674 8.7e-145 516.9 255 100.0
BcaB02g10686 Brassica carinata HOM05D006818 ORTHO05D008674 7.2e-75 284.6 222 62.2
CDE01G0156 Ceratophyllum demersum HOM05D006818 ORTHO05D008674 9.5e-75 284.3 226 61.9
Prupe.4G208600 Prunus persica HOM05D006818 ORTHO05D008674 6.1e-74 281.6 216 62.5
Ca_06305_v3 Cicer arietinum L. HOM05D006818 ORTHO05D008674 1.8e-73 280.0 201 66.2
Dinv22282 Davidia involucrata HOM05D006818 ORTHO05D008674 1.8e-73 280.0 235 58.7
LjContig00308g0005180 Lotus japonicus HOM05D006818 ORTHO05D008674 1.8e-73 280.0 202 63.9
RcHm_v2.0_Chr5g0037981 Rosa chinensis HOM05D006818 ORTHO05D008674 2.3e-73 279.6 216 62.0
Duzib213G0630 Durio zibethinus HOM05D006818 ORTHO05D008674 4.0e-73 278.9 216 60.6
MBI18_g06645_MAGBIO Magnolia biondii HOM05D006818 ORTHO05D008674 5.2e-73 278.5 220 60.5
GSVIVG01001999001 Vitis vinifera HOM05D006818 ORTHO05D008674 5.2e-73 278.5 211 64.5
ATR0752G046 Amborella trichopoda HOM05D006818 ORTHO05D008674 1.2e-72 277.3 181 71.8
BraA06t25672Z Brassica rapa HOM05D006818 ORTHO05D008674 1.2e-72 277.3 222 63.1
Manes.15G074101 Manihot esculenta HOM05D006818 ORTHO05D008674 1.2e-72 277.3 200 66.5
BcaC01g02294 Brassica carinata HOM05D006818 ORTHO05D008674 1.5e-72 276.9 222 63.1
C03p66930 Brassica napus HOM05D006818 ORTHO05D008674 1.5e-72 276.9 222 63.1
BolC3t18966H Brassica oleracea HOM05D006818 ORTHO05D008674 1.5e-72 276.9 222 63.1
A06p27360 Brassica napus HOM05D006818 ORTHO05D008674 2.6e-72 276.2 222 62.6
TAR627G0163 Trochodendron aralioides HOM05D006818 ORTHO05D008674 3.4e-72 275.8 216 59.7
ClCG05G014460 Citrullus lanatus HOM05D006818 ORTHO05D008674 4.4e-72 275.4 201 64.7
COL.COLO4_09629 Corchorus olitorius HOM05D006818 ORTHO05D008674 4.4e-72 275.4 215 62.8
ECA236G4406 Erigeron canadensis HOM05D006818 ORTHO05D008674 4.4e-72 275.4 185 69.7
CANSAT25G1970 Cannabis sativa HOM05D006818 ORTHO05D008674 5.7e-72 275.0 215 59.5
Sed0006226 Sechium edule HOM05D006818 ORTHO05D008674 5.7e-72 275.0 201 65.7
Gohir.A01G077200 Gossypium hirsutum HOM05D006818 ORTHO05D008674 9.8e-72 274.2 189 68.3
Gorai.002G085600 Gossypium raimondii HOM05D006818 ORTHO05D008674 9.8e-72 274.2 189 68.3
Thecc.07G044200 Theobroma cacao HOM05D006818 ORTHO05D008674 9.8e-72 274.2 216 61.1
QL08p011921 Quercus lobata HOM05D006818 ORTHO05D008674 1.3e-71 273.9 201 65.2
Zm00001eb070100 Zea mays HOM05D006818 ORTHO05D008674 1.3e-71 273.9 225 59.1
Carub.0005s1401 Capsella rubella HOM05D006818 ORTHO05D008674 1.7e-71 273.5 192 68.2
CsaV3_3G023260 Cucumis sativus L. HOM05D006818 ORTHO05D008674 2.8e-71 272.7 204 63.7
FvH4_3g22121 Fragaria vesca HOM05D006818 ORTHO05D008674 3.7e-71 272.3 193 65.3
Gohir.D01G064700 Gossypium hirsutum HOM05D006818 ORTHO05D008674 3.7e-71 272.3 189 67.7
Lsat_1_v5_gn_7_109080 Lactuca sativa HOM05D006818 ORTHO05D008674 3.7e-71 272.3 193 63.7
Oeu005459.1 Olea europaea HOM05D006818 ORTHO05D008674 3.7e-71 272.3 218 60.1
Psat2g015280 Pisum sativum HOM05D006818 ORTHO05D008674 6.3e-71 271.6 218 59.6
Ciclev10008835m.g Citrus clementina HOM05D006818 ORTHO05D008674 1.1e-70 270.8 223 58.7
MELO3C018077.2 Cucumis melo HOM05D006818 ORTHO05D008674 1.4e-70 270.4 204 62.7
Sp5g14080 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.4e-70 270.4 198 65.7
SpUn0103_0020 Schrenkiella parvula HOM05D006818 ORTHO05D008674 1.4e-70 270.4 198 65.7
Aqoxy1G03627 Aquilegia oxysepala HOM05D006818 ORTHO05D008674 1.8e-70 270.0 217 59.4
Glyma.14G025600 Glycine max HOM05D006818 ORTHO05D008674 1.8e-70 270.0 201 61.7
AL5G27200 Arabidopsis lyrata HOM05D006818 ORTHO05D008674 2.4e-70 269.6 194 67.0
MD11G1222300 Malus domestica HOM05D006818 ORTHO05D008674 2.4e-70 269.6 216 59.3
PGR031G1507 Punica granatum HOM05D006818 ORTHO05D008674 2.4e-70 269.6 216 60.6
AT3G47860 Arabidopsis thaliana HOM05D006818 ORTHO05D008674 4.1e-70 268.9 196 67.9
FAN11G0521 Fragaria x ananassa HOM05D006818 ORTHO05D008674 5.4e-70 268.5 187 66.3
Phvul.008G265400 Phaseolus vulgaris HOM05D006818 ORTHO05D008674 5.4e-70 268.5 202 61.4
QL08p012092 Quercus lobata HOM05D006818 ORTHO05D008674 5.4e-70 268.5 201 64.2
TPR.G12727 Trifolium pratense HOM05D006818 ORTHO05D008674 5.4e-70 268.5 197 65.5
CSS0009238 Camellia sinensis var. sinensis HOM05D006818 ORTHO05D008674 7.0e-70 268.1 200 64.0
Cpa.g.sc97.37 Carica papaya HOM05D006818 ORTHO05D008674 7.0e-70 268.1 217 63.1
Glyma.02G289400 Glycine max HOM05D006818 ORTHO05D008674 7.0e-70 268.1 201 61.7
MSTRG.6906 Avicennia marina HOM05D006818 ORTHO05D008674 1.2e-69 267.3 191 65.4
Lalb_Chr04g0248591 Lupinus albus HOM05D006818 ORTHO05D008674 1.2e-69 267.3 224 61.2
FAN16G0093 Fragaria x ananassa HOM05D006818 ORTHO05D008674 1.6e-69 266.9 179 68.7
Os04g0626400 Oryza sativa ssp. japonica HOM05D006818 ORTHO05D008674 2.0e-69 266.5 241 54.8
FAN25G3657 Fragaria x ananassa HOM05D006818 ORTHO05D008674 2.7e-69 266.2 180 67.8
Medtr5g092080 Medicago truncatula HOM05D006818 ORTHO05D008674 2.7e-69 266.2 202 63.4
PSO832G0412 Papaver somniferum HOM05D006818 ORTHO05D008674 2.7e-69 266.2 205 62.9
PSO210G7832 Papaver somniferum HOM05D006818 ORTHO05D008674 3.5e-69 265.8 221 58.8
Thhalv10010497m.g Eutrema salsugineum HOM05D006818 ORTHO05D008674 4.5e-69 265.4 221 58.8
TWI39G0401 Tripterygium wilfordii HOM05D006818 ORTHO05D008674 4.5e-69 265.4 220 59.5
HanXRQChr15g0494291 Helianthus annuus HOM05D006818 ORTHO05D008674 5.9e-69 265.0 193 63.7
Nn1g07100 Nelumbo nucifera HOM05D006818 ORTHO05D008674 5.9e-69 265.0 216 60.6
VMungo0647G1753 Vigna mungo HOM05D006818 ORTHO05D008674 5.9e-69 265.0 202 59.9
Ah.06g195870 Amaranthus hybridus HOM05D006818 ORTHO05D008674 1.0e-68 264.2 221 59.3
CiPaw.11G186900 Carya illinoinensis HOM05D006818 ORTHO05D008674 1.3e-68 263.8 216 57.4
Haze_09645 Corylus avellana HOM05D006818 ORTHO05D008674 1.3e-68 263.8 216 59.7
Eucgr.F03445 Eucalyptus grandis HOM05D006818 ORTHO05D008674 2.9e-68 262.7 216 56.5
unitig_62.g23277 Utricularia gibba HOM05D006818 ORTHO05D008674 2.9e-68 262.7 215 60.0
Lj8A167T47 Lonicera japonica HOM05D006818 ORTHO05D008674 3.9e-68 262.3 235 55.7
Atru.chr2.3275 Acer truncatum HOM05D006818 ORTHO05D008674 6.6e-68 261.5 240 55.8
Potri.001G420800 Populus trichocarpa HOM05D006818 ORTHO05D008674 6.6e-68 261.5 228 57.0
Rhsim06G0214800 Rhododendron simsii HOM05D006818 ORTHO05D008674 6.6e-68 261.5 223 58.3
arahy.Tifrunner.gnm1.ann1.37S2BM Arachis hypogaea HOM05D006818 ORTHO05D008674 8.6e-68 261.2 191 65.4
Peaxi162Scf01097g00023 Petunia axillaris HOM05D006818 ORTHO05D008674 8.6e-68 261.2 218 59.2
Sc06g0005170 Simmondsia chinensis HOM05D006818 ORTHO05D008674 8.6e-68 261.2 223 57.4
arahy.Tifrunner.gnm1.ann1.D1ZW30 Arachis hypogaea HOM05D006818 ORTHO05D008674 2.5e-67 259.6 191 65.4
Sopen12g001170 Solanum pennellii HOM05D006818 ORTHO05D008674 2.5e-67 259.6 202 61.4
Solyc12g005180.2 Solanum lycopersicum HOM05D006818 ORTHO05D008674 3.3e-67 259.2 202 60.9
Nitab4.5_0000749g0100 Nicotiana tabacum HOM05D006818 ORTHO05D008674 7.3e-67 258.1 201 61.2
Nitab4.5_0000653g0090 Nicotiana tabacum HOM05D006818 ORTHO05D008674 9.5e-67 257.7 201 60.7
PGSC0003DMG400001099 Solanum tuberosum HOM05D006818 ORTHO05D008674 1.2e-66 257.3 168 70.2
CAN.G315.6 Capsicum annuum HOM05D006818 ORTHO05D008674 1.6e-66 256.9 211 58.8
Cc05_g13490 Coffea canephora HOM05D006818 ORTHO05D008674 3.6e-66 255.8 215 57.7
Hund07318 Selenicereus undatus HOM05D006818 ORTHO05D008674 4.7e-66 255.4 237 55.7
HPP92_009349 Vanilla planifolia HOM05D006818 ORTHO05D008674 5.2e-65 251.9 140 79.3
Migut.M01786 Erythranthe guttata HOM05D006818 ORTHO05D008674 8.9e-65 251.1 240 50.8
EL10Ac4g09438 Beta vulgaris HOM05D006818 ORTHO05D008674 1.5e-64 250.4 235 52.8
Aa31LG4G16540 Aethionema arabicum HOM05D006818 ORTHO05D008674 2.0e-64 250.0 192 64.6
Sabra16G0285700 Salix brachista HOM05D006818 ORTHO05D008674 5.8e-64 248.4 244 53.3
QL08p012107 Quercus lobata HOM05D006818 ORTHO05D008674 1.3e-63 247.3 151 72.2
DCAR_022551 Daucus carota HOM05D006818 ORTHO05D008674 3.7e-63 245.7 193 59.1
SGA_v2.0_scaffold80G25946 Striga asiatica HOM05D006818 ORTHO05D008674 6.4e-63 245.0 233 53.2
Atru.BG.12.p Acer truncatum HOM05D006818 ORTHO05D008674 3.2e-62 242.7 140 78.6
MD03G1208100 Malus domestica HOM05D006818 ORTHO05D008674 2.3e-60 236.5 216 53.7
Mapoly0115s0028 Marchantia polymorpha HOM05D006818 ORTHO05D008674 3.6e-58 229.2 197 56.3
AUR62006731 Chenopodium quinoa HOM05D006818 ORTHO05D008674 8.1e-58 228.0 125 80.8
SMO147G0254 Selaginella moellendorffii HOM05D006818 ORTHO05D008674 2.3e-57 226.5 158 63.3
Pp3c9_6110 Physcomitrium patens HOM05D006818 ORTHO05D008674 8.3e-55 218.0 222 47.3
Actinidia05109 Actinidia chinensis HOM05D006818 ORTHO05D008674 2.9e-47 193.0 244 45.1
vmacro11742 Vaccinium macrocarpon HOM05D006818 ORTHO05D008674 3.3e-43 179.5 226 46.9
AUR62000376 Chenopodium quinoa HOM05D006818 ORTHO05D008674 1.3e-39 167.5 98 75.5
Hma1.2p1_1271F.1_g271840 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 2.4e-38 163.3 88 81.8
Hma1.2p1_1609F.1_g293429 Hydrangea macrophylla HOM05D006818 ORTHO05D008674 2.4e-38 163.3 88 81.8
AagrBONN_evm.TU.Sc2ySwM_228.3024 Anthoceros agrestis HOM05D006818 ORTHO05D008674 5.4e-38 162.2 99 70.7
CBR_g57971 Chara braunii HOM05D006818 ORTHO05D008674 9.3e-38 161.4 98 70.4
TPR.G29121 Trifolium pratense HOM05D006818 ORTHO05D008674 1.1e-30 137.9 105 62.9
PRCOL_00005879 Prasinoderma coloniale HOM05D006818 ORTHO05D008674 1.1e-27 127.9 131 45.8
RcHm_v2.0_Chr3g0496801 Rosa chinensis HOM05D006818 ORTHO05D008674 7.1e-22 108.6 118 50.0
TPR.G29124 Trifolium pratense HOM05D006818 ORTHO05D008674 3.9e-20 102.8 59 74.6
Actinidia09914 Actinidia chinensis HOM05D006818 ORTHO05D008674 4.5e-16 89.4 59 66.1
Ah.06g195920 Amaranthus hybridus HOM05D001023 ORTHO05D000912 3.2e-14 83.2 118 42.4
Glyma.14G153300 Glycine max HOM05D006818 ORTHO05D008674 4.2e-14 82.8 45 75.6


User provided reference genes

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