Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28586 Sequoiadendron giganteum HOM05D000144 ORTHO05D007336 4.1e-195 684.5 335 100.0
ATR0820G178 Amborella trichopoda HOM05D000144 ORTHO05D007336 3.3e-160 568.5 335 80.9
TAR636G0978 Trochodendron aralioides HOM05D000144 ORTHO05D007336 2.9e-156 555.4 335 79.4
Gohir.A07G108500 Gossypium hirsutum HOM05D000144 ORTHO05D007336 8.4e-156 553.9 335 80.0
ClCG01G012500 Citrullus lanatus HOM05D000144 ORTHO05D007336 1.4e-155 553.1 321 80.4
Duzib170G0934 Durio zibethinus HOM05D000144 ORTHO05D007336 2.4e-155 552.4 335 79.4
Gohir.D07G112300 Gossypium hirsutum HOM05D000144 ORTHO05D007336 3.2e-155 552.0 335 79.4
Gorai.001G120700 Gossypium raimondii HOM05D000144 ORTHO05D007336 3.2e-155 552.0 335 79.4
EL10Ac7g15788 Beta vulgaris HOM05D000144 ORTHO05D007336 5.5e-155 551.2 328 78.7
Dinv42577 Davidia involucrata HOM05D000144 ORTHO05D007336 7.1e-155 550.8 334 79.9
Nn6g34999 Nelumbo nucifera HOM05D000144 ORTHO05D007336 7.1e-155 550.8 335 77.6
Hma1.2p1_0305F.1_g119430 Hydrangea macrophylla HOM05D000144 ORTHO05D007336 3.5e-154 548.5 335 78.2
Sed0002834 Sechium edule HOM05D000144 ORTHO05D007336 7.9e-154 547.4 335 77.0
Thecc.09G288400 Theobroma cacao HOM05D000144 ORTHO05D007336 1.3e-153 546.6 335 77.9
MELO3C004752.2 Cucumis melo HOM05D000144 ORTHO05D007336 2.3e-153 545.8 321 79.1
RcHm_v2.0_Chr5g0043591 Rosa chinensis HOM05D000144 ORTHO05D007336 2.3e-153 545.8 335 77.0
Eucgr.J00461 Eucalyptus grandis HOM05D000144 ORTHO05D007336 3.0e-153 545.4 335 77.3
FAN21G0232 Fragaria x ananassa HOM05D000144 ORTHO05D007336 3.9e-153 545.0 335 76.4
Sc21g0004790 Simmondsia chinensis HOM05D000144 ORTHO05D007336 3.9e-153 545.0 335 75.8
CsaV3_1G014630 Cucumis sativus L. HOM05D000144 ORTHO05D007336 6.7e-153 544.3 321 78.8
AUR62009798 Chenopodium quinoa HOM05D000144 ORTHO05D007336 8.7e-153 543.9 336 77.1
FAN11G0873 Fragaria x ananassa HOM05D000144 ORTHO05D007336 1.9e-152 542.7 335 76.4
Glyma.13G318300 Glycine max HOM05D000144 ORTHO05D007336 1.9e-152 542.7 335 77.6
VMungo1080G0899 Vigna mungo HOM05D000144 ORTHO05D007336 2.5e-152 542.3 335 77.6
Potri.009G146400 Populus trichocarpa HOM05D000144 ORTHO05D007336 3.3e-152 542.0 335 77.6
Mapoly0008s0208 Marchantia polymorpha HOM05D000144 ORTHO05D007336 4.3e-152 541.6 335 77.0
Ca_01669_v3 Cicer arietinum L. HOM05D000144 ORTHO05D007336 7.4e-152 540.8 335 75.2
Zm00001eb176200 Zea mays HOM05D000144 ORTHO05D007336 9.6e-152 540.4 335 76.7
Ah.08g215990 Amaranthus hybridus HOM05D000144 ORTHO05D007336 1.3e-151 540.0 334 75.4
Glyma.12G182700 Glycine max HOM05D000144 ORTHO05D007336 1.3e-151 540.0 335 77.3
arahy.Tifrunner.gnm1.ann1.GZ1FF1 Arachis hypogaea HOM05D000144 ORTHO05D007336 1.6e-151 539.7 335 76.4
arahy.Tifrunner.gnm1.ann1.LG5WAH Arachis hypogaea HOM05D000144 ORTHO05D007336 1.6e-151 539.7 335 76.4
CiPaw.14G102500 Carya illinoinensis HOM05D000144 ORTHO05D007336 1.6e-151 539.7 335 77.6
CAN.G644.8 Capsicum annuum HOM05D000144 ORTHO05D007336 2.8e-151 538.9 332 77.4
PGR119G0139 Punica granatum HOM05D000144 ORTHO05D007336 2.8e-151 538.9 338 78.1
Prupe.6G123000 Prunus persica HOM05D000144 ORTHO05D007336 8.1e-151 537.3 335 76.7
QL01p013297 Quercus lobata HOM05D000144 ORTHO05D007336 8.1e-151 537.3 335 77.3
Sabra09G0113200 Salix brachista HOM05D000144 ORTHO05D007336 8.1e-151 537.3 335 76.1
Sabra09G0115600 Salix brachista HOM05D000144 ORTHO05D007336 8.1e-151 537.3 335 76.1
FAN25G0992 Fragaria x ananassa HOM05D000144 ORTHO05D007336 1.1e-150 537.0 340 75.0
MD11G1160100 Malus domestica HOM05D000144 ORTHO05D007336 1.8e-150 536.2 335 75.8
Oeu035545.1 Olea europaea HOM05D000144 ORTHO05D007336 1.8e-150 536.2 335 76.1
Medtr2g085075 Medicago truncatula HOM05D000144 ORTHO05D007336 2.4e-150 535.8 335 74.9
Os08g0557500 Oryza sativa ssp. japonica HOM05D000144 ORTHO05D007336 2.4e-150 535.8 318 78.3
MSTRG.17716 Avicennia marina HOM05D000144 ORTHO05D007336 3.1e-150 535.4 335 76.4
Aqoxy4G02840 Aquilegia oxysepala HOM05D000144 ORTHO05D007336 4.0e-150 535.0 328 75.9
CSS0014801 Camellia sinensis var. sinensis HOM05D000144 ORTHO05D007336 4.0e-150 535.0 321 78.5
Cfa010061 Carpinus fangiana HOM05D000144 ORTHO05D007336 4.0e-150 535.0 335 77.0
FAN25G0117 Fragaria x ananassa HOM05D000144 ORTHO05D007336 4.0e-150 535.0 340 74.7
Pp3c9_24450 Physcomitrium patens HOM05D000144 ORTHO05D007336 5.3e-150 534.6 336 77.1
Carub.0015s0019 Capsella rubella HOM05D000144 ORTHO05D007336 9.0e-150 533.9 335 75.5
Phvul.005G126100 Phaseolus vulgaris HOM05D000144 ORTHO05D007336 9.0e-150 533.9 335 76.4
Carub.0005s1024 Capsella rubella HOM05D000144 ORTHO05D007336 1.2e-149 533.5 335 75.5
Thhalv10002440m.g Eutrema salsugineum HOM05D000144 ORTHO05D007336 1.2e-149 533.5 335 76.4
Hund20866 Selenicereus undatus HOM05D000144 ORTHO05D007336 1.2e-149 533.5 334 75.4
Migut.N02503 Erythranthe guttata HOM05D000144 ORTHO05D007336 1.5e-149 533.1 335 75.5
Lj3g0007481 Lotus japonicus HOM05D000144 ORTHO05D007336 1.5e-149 533.1 329 76.6
Sp5g16610 Schrenkiella parvula HOM05D000144 ORTHO05D007336 1.5e-149 533.1 335 75.8
THA.LOC104799539 Tarenaya hassleriana HOM05D000144 ORTHO05D007336 1.5e-149 533.1 334 76.0
Cc01_g09550 Coffea canephora HOM05D000144 ORTHO05D007336 2.6e-149 532.3 318 78.3
PSO339G1139 Papaver somniferum HOM05D000144 ORTHO05D007336 2.6e-149 532.3 335 76.4
MD03G1138000 Malus domestica HOM05D000144 ORTHO05D007336 4.5e-149 531.6 321 77.6
Aa31LG4G14360 Aethionema arabicum HOM05D000144 ORTHO05D007336 5.8e-149 531.2 335 75.8
COL.COLO4_19942 Corchorus olitorius HOM05D000144 ORTHO05D007336 5.8e-149 531.2 370 71.9
HPP92_001977 Vanilla planifolia HOM05D000144 ORTHO05D007336 1.3e-148 530.0 335 74.6
PSO384G3065 Papaver somniferum HOM05D000144 ORTHO05D007336 1.7e-148 529.6 335 75.5
Sopen11g026800 Solanum pennellii HOM05D000144 ORTHO05D007336 1.7e-148 529.6 318 78.0
Solyc11g067090.2 Solanum lycopersicum HOM05D000144 ORTHO05D007336 2.2e-148 529.3 318 78.0
AL5G22730 Arabidopsis lyrata HOM05D000144 ORTHO05D007336 3.8e-148 528.5 318 78.0
Atru.chr3.3339 Acer truncatum HOM05D000144 ORTHO05D007336 4.9e-148 528.1 334 75.4
AT3G44600 Arabidopsis thaliana HOM05D000144 ORTHO05D007336 1.1e-147 526.9 335 75.2
Manes.04G006500 Manihot esculenta HOM05D000144 ORTHO05D007336 1.9e-147 526.2 320 77.5
HanXRQChr04g0094681 Helianthus annuus HOM05D000144 ORTHO05D007336 2.5e-147 525.8 335 74.3
BcaC01g02060 Brassica carinata HOM05D000144 ORTHO05D007336 4.2e-147 525.0 336 75.6
C03p69060 Brassica napus HOM05D000144 ORTHO05D007336 4.2e-147 525.0 336 75.6
BolC3t19161H Brassica oleracea HOM05D000144 ORTHO05D007336 4.2e-147 525.0 336 75.6
BraA06t25273Z Brassica rapa HOM05D000144 ORTHO05D007336 4.2e-147 525.0 336 75.3
CARHR151580 Cardamine hirsuta HOM05D000144 ORTHO05D007336 4.2e-147 525.0 332 75.3
A06p21820 Brassica napus HOM05D000144 ORTHO05D007336 5.5e-147 524.6 336 75.3
Psat5g256080 Pisum sativum HOM05D000144 ORTHO05D007336 5.5e-147 524.6 335 73.4
Ciclev10028028m.g Citrus clementina HOM05D000144 ORTHO05D007336 7.1e-147 524.2 334 74.6
PGSC0003DMG400007418 Solanum tuberosum HOM05D000144 ORTHO05D007336 7.1e-147 524.2 318 77.4
TWI79G0633 Tripterygium wilfordii HOM05D000144 ORTHO05D007336 9.3e-147 523.9 335 74.9
TWI79G1360 Tripterygium wilfordii HOM05D000144 ORTHO05D007336 9.3e-147 523.9 335 74.6
BcaB01g01158 Brassica carinata HOM05D000144 ORTHO05D007336 1.2e-146 523.5 335 74.0
Lalb_Chr14g0374131 Lupinus albus HOM05D000144 ORTHO05D007336 1.2e-146 523.5 335 74.6
CANSAT54G2980 Cannabis sativa HOM05D000144 ORTHO05D007336 6.0e-146 521.2 324 75.9
ECA233G1240 Erigeron canadensis HOM05D000144 ORTHO05D007336 1.8e-145 519.6 334 72.5
Rhsim02G0084400 Rhododendron simsii HOM05D000144 ORTHO05D007336 1.3e-143 513.5 361 69.5
Lsat_1_v5_gn_6_39720 Lactuca sativa HOM05D000144 ORTHO05D007336 3.7e-143 511.9 335 74.0
Gohir.A07G108720 Gossypium hirsutum HOM05D000144 ORTHO05D007336 7.6e-141 504.2 300 79.3
AUR62039246 Chenopodium quinoa HOM05D000144 ORTHO05D007336 5.5e-139 498.0 299 77.9
SMO364G0191 Selaginella moellendorffii HOM05D000144 ORTHO05D007336 5.5e-139 498.0 320 74.1
TPR.G23395 Trifolium pratense HOM05D000144 ORTHO05D007336 3.6e-138 495.4 335 69.9
Lj2C989G2 Lonicera japonica HOM05D000144 ORTHO05D007336 8.7e-137 490.7 354 68.9
Aqoxy7G01340 Aquilegia oxysepala HOM05D000144 ORTHO05D007336 3.4e-133 478.8 319 71.8
Manes.14G162200 Manihot esculenta HOM05D000144 ORTHO05D007336 5.1e-129 464.9 316 72.2
DCAR_006150 Daucus carota HOM05D000144 ORTHO05D007336 2.5e-123 446.0 277 76.5
SalBow3G1277 Salvia bowleyana HOM05D000144 ORTHO05D007336 3.2e-123 445.7 336 66.1
AagrBONN_evm.TU.Sc2ySwM_344.1463 Anthoceros agrestis HOM05D000144 ORTHO05D007336 2.6e-120 436.0 271 75.3
SGA_v2.0_scaffold102G29927 Striga asiatica HOM05D000144 ORTHO05D007336 1.7e-119 433.3 335 65.4
Peaxi162Scf00544g01012 Petunia axillaris HOM05D000144 ORTHO05D007336 3.1e-118 429.1 336 64.0
Nitab4.5_0003532g0080 Nicotiana tabacum HOM05D000144 ORTHO05D007336 3.5e-117 425.6 277 72.6
CBR_g45485 Chara braunii HOM05D000144 ORTHO05D007336 5.0e-116 421.8 297 68.0
CDE04G0784 Ceratophyllum demersum HOM05D000144 ORTHO05D007336 1.5e-115 420.2 277 71.8
Hma1.2p1_0305F.1_g119440 Hydrangea macrophylla HOM05D000144 ORTHO05D007336 1.1e-107 394.0 241 76.8
Haze_23428 Corylus avellana HOM05D000144 ORTHO05D007336 1.4e-105 387.1 401 53.4
Nitab4.5_0004240g0040 Nicotiana tabacum HOM05D000144 ORTHO05D007336 1.2e-101 374.0 336 57.4
MCO06G086 Micromonas commoda HOM05D000144 ORTHO05D007336 2.1e-98 363.2 329 56.5
Cpa.g.sc31.94 Carica papaya HOM05D000144 ORTHO05D007336 4.4e-96 355.5 212 79.7
Cre10.g453900 Chlamydomonas reinhardtii HOM05D000144 ORTHO05D007336 2.2e-95 353.2 339 51.9
Actinidia07228 Actinidia chinensis HOM05D000144 ORTHO05D007336 8.6e-92 341.3 248 66.1
FvH4_3g24280 Fragaria vesca HOM05D000144 ORTHO05D007336 8.0e-90 334.7 215 71.6
PRCOL_00001826 Prasinoderma coloniale HOM05D000144 ORTHO05D007336 4.6e-85 318.9 342 48.8
TPR.G3403 Trifolium pratense HOM05D000477 ORTHO05D000338 7.0e-78 295.0 196 69.4
Actinidia24194 Actinidia chinensis HOM05D000144 ORTHO05D007336 1.6e-74 283.9 268 57.1
Haze_26326 Corylus avellana HOM05D000144 ORTHO05D007336 1.1e-70 271.2 314 43.6
Lsat_1_v5_gn_8_43261 Lactuca sativa HOM05D000144 ORTHO05D007336 3.8e-55 219.5 137 72.3
SEGI_15813 Sequoiadendron giganteum HOM05D000144 ORTHO05D023591 1.3e-47 194.5 95 100.0
Lsat_1_v5_gn_2_29280 Lactuca sativa HOM05D000144 ORTHO05D023591 6.4e-47 192.2 120 73.3
Lsat_1_v5_gn_6_56741 Lactuca sativa HOM05D000144 ORTHO05D007336 1.2e-45 188.0 120 72.5
SHI00546 Sapria himalayana HOM05D000144 ORTHO05D007336 1.3e-44 184.5 215 47.4
Cpa.g.c27498 Carica papaya HOM05D000144 ORTHO05D007336 2.4e-38 163.7 95 82.1
Lsat_1_v5_gn_4_98601 Lactuca sativa HOM05D000144 ORTHO05D023591 2.1e-34 150.6 89 76.4
Aa31LG9G7040 Aethionema arabicum HOM05D000144 ORTHO05D007336 4.5e-32 142.9 96 67.7
Lsat_1_v5_gn_3_130281 Lactuca sativa HOM05D001939 ORTHO05D000541 8.7e-28 128.6 72 83.3
MBI17_g37522_MAGBIO Magnolia biondii HOM05D000144 ORTHO05D007336 1.0e-20 105.1 70 75.7
Thecc.03G088700 Theobroma cacao HOM05D000144 ORTHO05D023591 4.2e-14 83.2 48 79.2
SEGI_11529 Sequoiadendron giganteum HOM05D000144 ORTHO05D007336 5.1e-12 76.3 36 100.0
Eucgr.J00463 Eucalyptus grandis HOM05D000144 ORTHO05D007336 1.7e-10 71.2 36 91.7
Aqoxy5G03308 Aquilegia oxysepala HOM05D000144 ORTHO05D023591 4.5e-08 63.2 33 81.8
ATR0665G052 Amborella trichopoda HOM05D002561 ORTHO05D006466 4.2e-06 56.6 248 23.8


User provided reference genes

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