Gene: Cc01_g09550
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc01_g09550
- Transcript Identifier Cc01_g09550.1
- Gene Type Coding gene
- Location chr1 : 28229954-28237078 : negative
Gene Family Information
- ID HOM05D000144
- #Genes/#Species 2569/100
- Phylogenetic origin
- ID ORTHO05D007336
- #Genes/#Species 132/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- UniProtKB B9HQV4
- UniProtKB Q96BP3
- UniProtKB Q8CEC6
- UniProtKB I1M4E9
- UniProtKB Q29RZ2
- UniProtKB B9SSV2
- id GSCOCG00024015001
Descriptions
- Description Peptidylprolyl isomerase domain and WD repeat-containing protein 1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010338 | ISO | PLAZA Integrative Orthology | leaf formation | AT3G44600 |
| GO:0010305 | ISO | PLAZA Integrative Orthology | leaf vascular tissue pattern formation | AT3G44600 |
| GO:0010358 | ISO | PLAZA Integrative Orthology | leaf shaping | AT3G44600 |
| GO:0048453 | ISO | PLAZA Integrative Orthology | sepal formation | AT3G44600 |
| GO:0048443 | ISO | PLAZA Integrative Orthology | stamen development | AT3G44600 |
| GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT3G44600 |
| GO:0048440 | ISO | PLAZA Integrative Orthology | carpel development | AT3G44600 |
| GO:0009933 | ISO | PLAZA Integrative Orthology | meristem structural organization | AT3G44600 |
| GO:0000412 | ISO | PLAZA Integrative Orthology | histone peptidyl-prolyl isomerization | AT3G44600 |
| GO:0061087 | ISO | PLAZA Integrative Orthology | positive regulation of histone H3-K27 methylation | AT3G44600 |
| GO:0010082 | ISO | PLAZA Integrative Orthology | regulation of root meristem growth | AT3G44600 |
| GO:0031060 | ISO | PLAZA Integrative Orthology | regulation of histone methylation | AT3G44600 |
| GO:0000413 | IEA | InterPro | protein peptidyl-prolyl isomerization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0042393 | ISO | PLAZA Integrative Orthology | histone binding | AT3G44600 |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003682 | ISO | PLAZA Integrative Orthology | chromatin binding | AT3G44600 |
| GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G44600 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR029000 | Cyclophilin-like domain superfamily |
| IPR001680 | WD40 repeat |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR002130 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR044666 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like |
| Mapman id | Description |
|---|---|
| 18.13.1 | Protein modification.protein folding.protein folding catalyst (Cyclophilin) |