Gene: AT3G44600
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G44600
- Transcript Identifier AT3G44600.1
- Gene Type Coding gene
- Location Chr3 : 16165368-16169201 : negative
Gene Family Information
- ID HOM05D000144
- #Genes/#Species 2569/100
- Phylogenetic origin
- ID ORTHO05D007336
- #Genes/#Species 132/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid AT3G44600.1
- symbol CYP71
- Alias AtCYP71
- full_name cyclophilin 71
- uniprot Q8W4D0
Descriptions
- Description cyclophilin71
- Computational description cyclophilin71 (CYP71); CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein (TAIR:AT2G36130.1); Has 19122 Blast hits to 18688 proteins in 2726 species: Archae - 110; Bacteria - 7959; Metazoa - 3135; Fungi - 1772; Plants - 1406; Viruses - 0; Other Eukaryotes - 4740 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0061087 | IDA | Gene Ontology | positive regulation of histone H3-K27 methylation | 1 |
GO:0000413 | IEA | GOA Database | protein peptidyl-prolyl isomerization | |
GO:0000413 | IDA IBA | Gene Ontology | protein peptidyl-prolyl isomerization | 2 3 |
GO:0000413 | IEA | InterPro | protein peptidyl-prolyl isomerization | |
GO:0000412 | IDA | Gene Ontology | histone peptidyl-prolyl isomerization | 3 |
GO:0048453 | IMP | Gene Ontology | sepal formation | 1 |
GO:0048443 | IMP | Gene Ontology | stamen development | 1 |
GO:0048440 | IMP | Gene Ontology | carpel development | 1 |
GO:0031060 | IMP | Gene Ontology | regulation of histone methylation | 1 |
GO:0010358 | IMP | Gene Ontology | leaf shaping | 1 |
GO:0010338 | IMP | Gene Ontology | leaf formation | 1 |
GO:0010305 | IMP | Gene Ontology | leaf vascular tissue pattern formation | 1 |
GO:0010082 | IMP | Gene Ontology | regulation of root meristem growth | 1 |
GO:0009933 | IMP | Gene Ontology | meristem structural organization | 1 |
GO:0009909 | IMP | Gene Ontology | regulation of flower development | 1 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003755 | IEA | GOA Database | peptidyl-prolyl cis-trans isomerase activity | |
GO:0003755 | IDA IBA | Gene Ontology | peptidyl-prolyl cis-trans isomerase activity | 2 3 |
GO:0003755 | IEA | InterPro | peptidyl-prolyl cis-trans isomerase activity | |
GO:0005515 | IEA | InterPro | protein binding | |
GO:0016853 | IEA | GOA Database | isomerase activity | |
GO:0042393 | IDA | Gene Ontology | histone binding | 1 |
GO:0003682 | IDA | Gene Ontology | chromatin binding | 1 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | GOA Database | nucleus | |
GO:0005634 | IDA ISM | Gene Ontology | nucleus | 1 |
GO:0080008 | ISS | Gene Ontology | Cul4-RING E3 ubiquitin ligase complex | 4 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
IPR044666 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like |
IPR002130 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain |
IPR029000 | Cyclophilin-like domain superfamily |
IPR001680 | WD40 repeat |
IPR036322 | WD40-repeat-containing domain superfamily |
Mapman id | Description |
---|---|
18.13.1 | Protein modification.protein folding.protein folding catalyst (Cyclophilin) |