Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_28315 Sequoiadendron giganteum HOM05D004256 ORTHO05D005224 3.6e-114 414.8 197 100.0
Nn2g15522 Nelumbo nucifera HOM05D004256 ORTHO05D005224 1.5e-48 196.8 187 51.9
Eucgr.K01946 Eucalyptus grandis HOM05D004256 ORTHO05D005224 1.3e-47 193.7 183 53.6
MD05G1271600 Malus domestica HOM05D004256 ORTHO05D005224 3.8e-47 192.2 189 50.8
TAR627G0580 Trochodendron aralioides HOM05D004256 ORTHO05D005224 4.9e-47 191.8 187 51.9
MD10G1252200 Malus domestica HOM05D004256 ORTHO05D005224 8.4e-47 191.0 194 50.5
SMO165G0118 Selaginella moellendorffii HOM05D004256 ORTHO05D005224 1.1e-46 190.7 186 51.1
CiPaw.09G142400 Carya illinoinensis HOM05D004256 ORTHO05D005224 1.4e-46 190.3 191 50.8
Aqoxy5G02462 Aquilegia oxysepala HOM05D004256 ORTHO05D005224 1.9e-46 189.9 189 50.3
Prupe.4G091400 Prunus persica HOM05D004256 ORTHO05D005224 1.9e-46 189.9 191 51.8
SalBow7G4118 Salvia bowleyana HOM05D004256 ORTHO05D005224 3.2e-46 189.1 193 48.2
CANSAT35G1931 Cannabis sativa HOM05D004256 ORTHO05D005224 5.5e-46 188.3 160 59.4
COL.COLO4_26853 Corchorus olitorius HOM05D004256 ORTHO05D005224 9.3e-46 187.6 191 51.3
Sc17g0004580 Simmondsia chinensis HOM05D004256 ORTHO05D005224 9.3e-46 187.6 190 51.6
Sabra16G0315900 Salix brachista HOM05D004256 ORTHO05D005224 1.2e-45 187.2 154 59.1
MBI02_g25367_MAGBIO Magnolia biondii HOM05D004256 ORTHO05D005224 1.6e-45 186.8 182 53.8
Dinv11058 Davidia involucrata HOM05D004256 ORTHO05D005224 2.1e-45 186.4 185 52.4
FAN21G3884 Fragaria x ananassa HOM05D004256 ORTHO05D005224 3.5e-45 185.7 190 51.6
TWI63G0578 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 3.5e-45 185.7 160 57.5
Zm00001eb300700 Zea mays HOM05D004256 ORTHO05D005224 3.5e-45 185.7 190 52.1
FAN16G0878 Fragaria x ananassa HOM05D004256 ORTHO05D005224 4.6e-45 185.3 190 51.6
RcHm_v2.0_Chr5g0016471 Rosa chinensis HOM05D004256 ORTHO05D005224 4.6e-45 185.3 191 52.4
Potri.001G465500 Populus trichocarpa HOM05D004256 ORTHO05D005224 6.0e-45 184.9 154 58.4
A01p12320 Brassica napus HOM05D004256 ORTHO05D005224 1.8e-44 183.3 193 51.3
BraA01t01176Z Brassica rapa HOM05D004256 ORTHO05D005224 1.8e-44 183.3 193 51.3
TWI38G1119 Tripterygium wilfordii HOM05D004256 ORTHO05D005224 2.3e-44 183.0 183 53.6
C01p14740 Brassica napus HOM05D004256 ORTHO05D005224 3.0e-44 182.6 193 51.8
BolC1t01426H Brassica oleracea HOM05D004256 ORTHO05D005224 3.0e-44 182.6 193 51.8
Thecc.06G004200 Theobroma cacao HOM05D004256 ORTHO05D005224 3.0e-44 182.6 152 61.2
EL10Ac8g19544 Beta vulgaris HOM05D004256 ORTHO05D005224 3.9e-44 182.2 190 52.1
Ciclev10014179m.g Citrus clementina HOM05D004256 ORTHO05D005224 3.9e-44 182.2 184 51.6
PSO675G2772 Papaver somniferum HOM05D004256 ORTHO05D005224 3.9e-44 182.2 156 58.3
QL05p062735 Quercus lobata HOM05D004256 ORTHO05D005224 3.9e-44 182.2 189 48.7
CARHR227470 Cardamine hirsuta HOM05D004256 ORTHO05D005224 6.7e-44 181.4 194 50.5
ClCG03G008210 Citrullus lanatus HOM05D004256 ORTHO05D005224 6.7e-44 181.4 193 47.7
AL7G33240 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 8.7e-44 181.0 191 50.8
Duzib192G0446 Durio zibethinus HOM05D004256 ORTHO05D005224 8.7e-44 181.0 152 61.8
CSS0036381 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 1.1e-43 180.6 153 58.8
CSS0039858 Camellia sinensis var. sinensis HOM05D004109 ORTHO05D005867 1.1e-43 180.6 153 58.8
MELO3C002826.2 Cucumis melo HOM05D004256 ORTHO05D005224 1.5e-43 180.3 158 55.1
FvH4_3g10230 Fragaria vesca HOM05D004256 ORTHO05D005224 1.5e-43 180.3 154 58.4
FAN11G3535 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.5e-43 180.3 154 58.4
Ah.14g086130 Amaranthus hybridus HOM05D004256 ORTHO05D005224 1.9e-43 179.9 189 49.2
Psat7g093560 Pisum sativum HOM05D004256 ORTHO05D005224 2.5e-43 179.5 185 49.7
TPR.G30378 Trifolium pratense HOM05D004256 ORTHO05D005224 2.5e-43 179.5 185 50.3
Sp7g19000 Schrenkiella parvula HOM05D004256 ORTHO05D005224 3.3e-43 179.1 193 49.7
Gohir.A06G119600 Gossypium hirsutum HOM05D004256 ORTHO05D005224 5.7e-43 178.3 186 50.5
Os07g0164000 Oryza sativa ssp. japonica HOM05D004256 ORTHO05D005224 5.7e-43 178.3 185 51.9
PGR031G3593 Punica granatum HOM05D004256 ORTHO05D005224 5.7e-43 178.3 156 55.8
Manes.06G068000 Manihot esculenta HOM05D004256 ORTHO05D005224 7.4e-43 177.9 154 57.8
CsaV3_1G037200 Cucumis sativus L. HOM05D004256 ORTHO05D005224 9.6e-43 177.6 150 58.0
Thhalv10024326m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 1.3e-42 177.2 193 48.7
arahy.Tifrunner.gnm1.ann1.NJCF43 Arachis hypogaea HOM05D004256 ORTHO05D005224 1.6e-42 176.8 187 48.1
THA.LOC104812246 Tarenaya hassleriana HOM05D004256 ORTHO05D005224 1.6e-42 176.8 190 48.4
GSVIVG01021670001 Vitis vinifera HOM05D004256 ORTHO05D005224 1.6e-42 176.8 187 49.2
Ca_18290_v3 Cicer arietinum L. HOM05D004256 ORTHO05D005224 2.1e-42 176.4 186 48.9
Cc09_g07800 Coffea canephora HOM05D004256 ORTHO05D005224 2.8e-42 176.0 159 54.7
Gorai.010G144100 Gossypium raimondii HOM05D004256 ORTHO05D005224 2.8e-42 176.0 152 59.2
Actinidia31383 Actinidia chinensis HOM05D004256 ORTHO05D005224 3.7e-42 175.6 149 58.4
AT4G20910 Arabidopsis thaliana HOM05D004256 ORTHO05D005224 3.7e-42 175.6 191 48.7
Lalb_Chr13g0291451 Lupinus albus HOM05D004256 ORTHO05D005224 3.7e-42 175.6 189 48.7
DCAR_003847 Daucus carota HOM05D004256 ORTHO05D005224 4.8e-42 175.3 155 55.5
Lj4g0013937 Lotus japonicus HOM05D004256 ORTHO05D005224 4.8e-42 175.3 159 56.0
Cfa004790 Carpinus fangiana HOM05D004256 ORTHO05D005224 6.2e-42 174.9 156 55.8
BcaB03g11710 Brassica carinata HOM05D004256 ORTHO05D005224 8.2e-42 174.5 192 48.4
Rhsim02G0162800 Rhododendron simsii HOM05D004256 ORTHO05D005224 1.1e-41 174.1 192 46.9
Peaxi162Scf00670g00215 Petunia axillaris HOM05D004256 ORTHO05D005224 1.8e-41 173.3 153 57.5
Glyma.05G126600 Glycine max HOM05D004256 ORTHO05D005224 2.4e-41 172.9 151 56.3
HPP92_009410 Vanilla planifolia HOM05D004256 ORTHO05D005224 2.4e-41 172.9 189 50.8
Aa31LG6G2980 Aethionema arabicum HOM05D004256 ORTHO05D005224 4.0e-41 172.2 193 47.7
Carub.0007s2052 Capsella rubella HOM05D004256 ORTHO05D005224 6.9e-41 171.4 191 47.1
CAN.G79.16 Capsicum annuum HOM05D004256 ORTHO05D005224 6.9e-41 171.4 153 56.2
Migut.H01323 Erythranthe guttata HOM05D004256 ORTHO05D005224 6.9e-41 171.4 190 44.7
Phvul.002G198200 Phaseolus vulgaris HOM05D004256 ORTHO05D005224 6.9e-41 171.4 151 57.0
Atru.chr10.795 Acer truncatum HOM05D004256 ORTHO05D005224 1.2e-40 170.6 185 48.6
Sopen02g019190 Solanum pennellii HOM05D004256 ORTHO05D005224 1.2e-40 170.6 151 57.0
arahy.Tifrunner.gnm1.ann1.71MGM7 Arachis hypogaea HOM05D004256 ORTHO05D005224 1.5e-40 170.2 187 47.6
Lalb_Chr12g0208801 Lupinus albus HOM05D004256 ORTHO05D005224 2.0e-40 169.9 187 48.1
Oeu014331.2 Olea europaea HOM05D004256 ORTHO05D005224 2.0e-40 169.9 163 54.0
Glyma.08G081600 Glycine max HOM05D004256 ORTHO05D005224 3.4e-40 169.1 151 55.0
Nitab4.5_0001225g0210 Nicotiana tabacum HOM05D004256 ORTHO05D005224 3.4e-40 169.1 153 55.6
SGA_v2.0_scaffold106G30680 Striga asiatica HOM05D004256 ORTHO05D005224 3.4e-40 169.1 153 54.2
BraA01t01178Z Brassica rapa HOM05D004256 ORTHO05D005224 4.5e-40 168.7 191 47.1
Solyc02g070030.4 Solanum lycopersicum HOM05D004256 ORTHO05D005224 5.8e-40 168.3 151 56.3
HanXRQChr04g0117221 Helianthus annuus HOM05D004256 ORTHO05D005224 7.6e-40 167.9 189 49.2
Lj1A1161T63 Lonicera japonica HOM05D004256 ORTHO05D005224 7.6e-40 167.9 189 50.3
FAN08G3148 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.0e-39 167.5 154 54.5
Medtr4g094545 Medicago truncatula HOM05D004256 ORTHO05D005224 1.3e-39 167.2 183 48.1
VMungo0251G1323 Vigna mungo HOM05D004256 ORTHO05D005224 1.3e-39 167.2 150 55.3
BolC1t01428H Brassica oleracea HOM05D004256 ORTHO05D005224 2.9e-39 166.0 191 46.6
Lsat_1_v5_gn_7_34341 Lactuca sativa HOM05D004256 ORTHO05D005224 3.8e-39 165.6 199 47.2
AL7G33230 Arabidopsis lyrata HOM05D004256 ORTHO05D005224 5.5e-38 161.8 194 45.4
BcaC09g51291 Brassica carinata HOM05D004256 ORTHO05D005224 5.5e-38 161.8 191 46.1
C01p14750 Brassica napus HOM05D004256 ORTHO05D005224 5.5e-38 161.8 191 46.1
ECA236G4703 Erigeron canadensis HOM05D004256 ORTHO05D005224 2.1e-37 159.8 193 45.1
AagrBONN_evm.TU.Sc2ySwM_117.1656 Anthoceros agrestis HOM05D004256 ORTHO05D005224 2.7e-37 159.5 200 42.5
unitig_0.g923 Utricularia gibba HOM05D004256 ORTHO05D005224 7.9e-37 157.9 188 46.3
Thhalv10024347m.g Eutrema salsugineum HOM05D004256 ORTHO05D005224 3.9e-36 155.6 191 46.6
Mapoly0004s0071 Marchantia polymorpha HOM05D004256 ORTHO05D005224 3.9e-36 155.6 210 43.3
BcaC09g51294 Brassica carinata HOM05D004256 ORTHO05D005224 5.1e-36 155.2 159 54.7
Carub.0007s2051 Capsella rubella HOM05D004256 ORTHO05D005224 1.5e-35 153.7 193 45.1
ATR1098G117 Amborella trichopoda HOM05D004256 ORTHO05D005224 1.9e-35 153.3 195 45.1
Cpa.g.sc166.41 Carica papaya HOM05D004256 ORTHO05D007693 1.1e-33 147.5 177 45.2
CDE02G0763 Ceratophyllum demersum HOM05D004256 ORTHO05D005224 1.1e-33 147.5 174 45.4
Dinv16824 Davidia involucrata HOM05D010983 ORTHO05D005224 3.1e-33 146.0 135 56.3
Pp3c1_60 Physcomitrium patens HOM05D004256 ORTHO05D005224 9.0e-33 144.4 178 44.9
Zm00001eb161380 Zea mays HOM05D004256 ORTHO05D005224 2.0e-32 143.3 175 48.6
Nitab4.5_0001583g0180 Nicotiana tabacum HOM05D004256 ORTHO05D005224 1.1e-30 137.5 140 52.1
SEGI_09964 Sequoiadendron giganteum HOM05D000070 ORTHO05D005224 9.4e-30 134.4 73 90.4
CBR_g29910 Chara braunii HOM05D000019 ORTHO05D005224 2.5e-22 109.8 262 29.0
Oeu021898.3 Olea europaea HOM05D004256 ORTHO05D005224 1.3e-18 97.4 102 50.0
FAN18G3233 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.7e-18 97.1 72 59.7
FAN18G2742 Fragaria x ananassa HOM05D004256 ORTHO05D005224 1.8e-17 93.6 67 59.7
CAN.G79.20 Capsicum annuum HOM05D004256 ORTHO05D005224 9.1e-17 91.3 97 47.4
Cre03.g191200 Chlamydomonas reinhardtii HOM05D004256 ORTHO05D005224 6.1e-13 78.6 140 32.1
BcaNung04717 Brassica carinata HOM05D004256 ORTHO05D005224 1.3e-10 70.9 76 44.7


User provided reference genes

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