Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27973 Sequoiadendron giganteum HOM05D005338 ORTHO05D006550 2.0e-71 272.3 135 100.0
Nn8g40744 Nelumbo nucifera HOM05D005338 ORTHO05D006550 2.1e-17 92.8 78 60.3
Aa31LG7G14440 Aethionema arabicum HOM05D005338 ORTHO05D006550 6.2e-17 91.3 53 77.4
Lsat_1_v5_gn_1_19481 Lactuca sativa HOM05D005338 ORTHO05D006550 1.4e-16 90.1 53 75.5
Oeu012884.1 Olea europaea HOM05D005338 ORTHO05D006550 1.4e-16 90.1 53 75.5
CARHR113580 Cardamine hirsuta HOM05D005338 ORTHO05D006550 1.8e-16 89.7 53 77.4
Thhalv10000318m.g Eutrema salsugineum HOM05D005338 ORTHO05D006550 1.8e-16 89.7 53 77.4
Lj4A782T79 Lonicera japonica HOM05D005338 ORTHO05D006550 1.8e-16 89.7 53 75.5
THA.LOC104824882 Tarenaya hassleriana HOM05D005338 ORTHO05D006550 1.8e-16 89.7 53 77.4
GSVIVG01009622001 Vitis vinifera HOM05D005338 ORTHO05D006550 3.1e-16 89.0 54 74.1
AT2G22370 Arabidopsis thaliana HOM05D005338 ORTHO05D006550 4.0e-16 88.6 53 75.5
Dinv36026 Davidia involucrata HOM05D005338 ORTHO05D006550 4.0e-16 88.6 53 75.5
QL02p007082 Quercus lobata HOM05D005338 ORTHO05D006550 4.0e-16 88.6 53 75.5
AL4G11870 Arabidopsis lyrata HOM05D005338 ORTHO05D006550 5.3e-16 88.2 53 75.5
DCAR_003287 Daucus carota HOM05D005338 ORTHO05D006550 5.3e-16 88.2 53 77.4
CSS0015965 Camellia sinensis var. sinensis HOM05D005338 ORTHO05D006550 6.9e-16 87.8 53 75.5
Carub.0004s0155 Capsella rubella HOM05D005338 ORTHO05D006550 6.9e-16 87.8 53 73.6
Cpa.g.sc337.5 Carica papaya HOM05D005338 ORTHO05D006550 6.9e-16 87.8 53 75.5
Cfa018461 Carpinus fangiana HOM05D005338 ORTHO05D006550 6.9e-16 87.8 76 57.9
Lalb_Chr15g0083931 Lupinus albus HOM05D005338 ORTHO05D006550 6.9e-16 87.8 53 73.6
RcHm_v2.0_Chr7g0238871 Rosa chinensis HOM05D005338 ORTHO05D006550 6.9e-16 87.8 57 71.9
vmacro21598 Vaccinium macrocarpon HOM05D005338 ORTHO05D006550 6.9e-16 87.8 64 67.2
EL10Ac3g06218 Beta vulgaris HOM05D005338 ORTHO05D006550 9.0e-16 87.4 54 72.2
MBI01_g22964_MAGBIO Magnolia biondii HOM05D005338 ORTHO05D006550 9.0e-16 87.4 53 75.5
Actinidia15288 Actinidia chinensis HOM05D005338 ORTHO05D006550 1.5e-15 86.7 53 73.6
CiPaw.15G069200 Carya illinoinensis HOM05D005338 ORTHO05D006550 1.5e-15 86.7 53 73.6
Hma1.2p1_0471F.1_g159310 Hydrangea macrophylla HOM05D005338 ORTHO05D006550 1.5e-15 86.7 53 73.6
TPR.G29215 Trifolium pratense HOM05D005338 ORTHO05D006550 1.5e-15 86.7 56 71.4
CANSAT56G3114 Cannabis sativa HOM05D005338 ORTHO05D006550 2.0e-15 86.3 53 73.6
Glyma.09G054300 Glycine max HOM05D005338 ORTHO05D006550 2.0e-15 86.3 53 73.6
Glyma.15G160500 Glycine max HOM05D005338 ORTHO05D006550 2.0e-15 86.3 53 73.6
Glyma.18G135700 Glycine max HOM05D005338 ORTHO05D006550 2.0e-15 86.3 53 73.6
PGR083G0298 Punica granatum HOM05D005338 ORTHO05D006550 2.0e-15 86.3 53 71.7
arahy.Tifrunner.gnm1.ann1.82M2ZV Arachis hypogaea HOM05D005338 ORTHO05D006550 2.6e-15 85.9 53 73.6
arahy.Tifrunner.gnm1.ann1.F09FAE Arachis hypogaea HOM05D005338 ORTHO05D006550 2.6e-15 85.9 53 73.6
arahy.Tifrunner.gnm1.ann1.N4382H Arachis hypogaea HOM05D005338 ORTHO05D006550 2.6e-15 85.9 53 73.6
arahy.Tifrunner.gnm1.ann1.VZ94AI Arachis hypogaea HOM05D005338 ORTHO05D006550 2.6e-15 85.9 53 73.6
TWI74G1059 Tripterygium wilfordii HOM05D005338 ORTHO05D006550 2.6e-15 85.9 54 72.2
Psat1g148520 Pisum sativum HOM05D005338 ORTHO05D006550 3.4e-15 85.5 53 71.7
Prupe.1G517500 Prunus persica HOM05D005338 ORTHO05D006550 3.4e-15 85.5 53 71.7
Cfa002226 Carpinus fangiana HOM05D005338 ORTHO05D006550 4.5e-15 85.1 53 71.7
Gohir.D11G220100 Gossypium hirsutum HOM05D005338 ORTHO05D006550 4.5e-15 85.1 53 73.6
Lj4g0021487 Lotus japonicus HOM05D005338 ORTHO05D006550 4.5e-15 85.1 53 71.7
Peaxi162Scf00479g00910 Petunia axillaris HOM05D005338 ORTHO05D006550 4.5e-15 85.1 53 71.7
Phvul.009G240644 Phaseolus vulgaris HOM05D005338 ORTHO05D006550 5.8e-15 84.7 53 71.7
Prupe.1G518900 Prunus persica HOM05D005338 ORTHO05D006550 5.8e-15 84.7 53 71.7
RcHm_v2.0_Chr5g0038311 Rosa chinensis HOM05D005338 ORTHO05D006550 5.8e-15 84.7 53 73.6
VMungo1215G3044 Vigna mungo HOM05D005338 ORTHO05D006550 5.8e-15 84.7 53 71.7
Nitab4.5_0000154g0040 Nicotiana tabacum HOM05D005338 ORTHO05D006550 7.6e-15 84.3 53 71.7
CANSAT25G1955 Cannabis sativa HOM05D005338 ORTHO05D006550 9.9e-15 84.0 53 73.6
CAN.G162.113 Capsicum annuum HOM05D005338 ORTHO05D006550 9.9e-15 84.0 53 71.7
ECA247G2066 Erigeron canadensis HOM05D005338 ORTHO05D006550 9.9e-15 84.0 53 73.6
Migut.H00565 Erythranthe guttata HOM05D005338 ORTHO05D006550 9.9e-15 84.0 53 73.6
Nitab4.5_0003384g0030 Nicotiana tabacum HOM05D005338 ORTHO05D006550 9.9e-15 84.0 53 71.7
Solyc06g008010.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 9.9e-15 84.0 53 71.7
Eucgr.F01508 Eucalyptus grandis HOM05D005338 ORTHO05D006550 1.3e-14 83.6 53 71.7
Gohir.A11G203500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 1.3e-14 83.6 53 73.6
Gorai.007G236400 Gossypium raimondii HOM05D005338 ORTHO05D006550 1.3e-14 83.6 53 73.6
HanXRQChr04g0104391 Helianthus annuus HOM05D005338 ORTHO05D006550 1.3e-14 83.6 53 69.8
Medtr5g044730 Medicago truncatula HOM05D005338 ORTHO05D006550 1.3e-14 83.6 56 69.6
Rhsim06G0038600 Rhododendron simsii HOM05D005338 ORTHO05D006550 1.3e-14 83.6 53 73.6
MSTRG.2958 Avicennia marina HOM05D005338 ORTHO05D006550 1.7e-14 83.2 53 73.6
Medtr2g438770 Medicago truncatula HOM05D005338 ORTHO05D006550 1.7e-14 83.2 53 71.7
SalBow1G1006 Salvia bowleyana HOM05D000168 ORTHO05D006550 1.7e-14 83.2 53 75.5
FvH4_5g37300 Fragaria vesca HOM05D005338 ORTHO05D006550 2.2e-14 82.8 53 73.6
FAN04G2403 Fragaria x ananassa HOM05D005338 ORTHO05D006550 2.2e-14 82.8 53 73.6
FAN08G1597 Fragaria x ananassa HOM05D005338 ORTHO05D006550 2.2e-14 82.8 53 73.6
FAN18G4080 Fragaria x ananassa HOM05D005338 ORTHO05D006550 2.2e-14 82.8 53 73.6
Potri.007G095300 Populus trichocarpa HOM05D005338 ORTHO05D006550 2.2e-14 82.8 51 78.4
Sopen06g002850 Solanum pennellii HOM05D005338 ORTHO05D006550 2.2e-14 82.8 53 69.8
PGSC0003DMG400014704 Solanum tuberosum HOM05D005338 ORTHO05D006550 2.2e-14 82.8 53 69.8
SGA_v2.0_scaffold4G02341 Striga asiatica HOM05D005338 ORTHO05D006550 2.2e-14 82.8 53 71.7
VMungo1309G1758 Vigna mungo HOM05D005338 ORTHO05D006550 2.2e-14 82.8 53 69.8
Aqoxy1G02678 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 2.9e-14 82.4 53 69.8
CDE07G0352 Ceratophyllum demersum HOM05D005338 ORTHO05D006550 2.9e-14 82.4 53 71.7
Duzib147G0908 Durio zibethinus HOM05D005338 ORTHO05D006550 2.9e-14 82.4 53 71.7
Gohir.A02G128500 Gossypium hirsutum HOM05D005338 ORTHO05D006550 2.9e-14 82.4 53 71.7
Gohir.D03G039200 Gossypium hirsutum HOM05D005338 ORTHO05D006550 2.9e-14 82.4 53 71.7
Gorai.003G040400 Gossypium raimondii HOM05D005338 ORTHO05D006550 2.9e-14 82.4 53 71.7
Sed0010775 Sechium edule HOM05D005338 ORTHO05D006550 2.9e-14 82.4 53 67.9
Aqoxy6G01960 Aquilegia oxysepala HOM05D005338 ORTHO05D006550 3.8e-14 82.0 53 69.8
COL.COLO4_27273 Corchorus olitorius HOM05D005338 ORTHO05D006550 3.8e-14 82.0 53 69.8
FAN13G0739 Fragaria x ananassa HOM05D005338 ORTHO05D006550 3.8e-14 82.0 53 71.7
Hund12454 Selenicereus undatus HOM05D005338 ORTHO05D006550 3.8e-14 82.0 72 55.6
BcaC02g08666 Brassica carinata HOM05D005338 ORTHO05D006550 4.9e-14 81.6 54 74.1
BcaC02g08711 Brassica carinata HOM05D005338 ORTHO05D006550 4.9e-14 81.6 54 74.1
A04p16850 Brassica napus HOM05D005338 ORTHO05D006550 4.9e-14 81.6 54 74.1
C04p51430 Brassica napus HOM05D005338 ORTHO05D006550 4.9e-14 81.6 54 74.1
BraA04t17318Z Brassica rapa HOM05D005338 ORTHO05D006550 4.9e-14 81.6 54 74.1
Cc07_g04760 Coffea canephora HOM05D005338 ORTHO05D006550 4.9e-14 81.6 53 71.7
PSO170G4003 Papaver somniferum HOM05D005338 ORTHO05D006550 6.4e-14 81.3 53 66.0
Sabra07G0078500 Salix brachista HOM05D005338 ORTHO05D006550 6.4e-14 81.3 51 78.4
ATR0767G114 Amborella trichopoda HOM05D005338 ORTHO05D006550 8.4e-14 80.9 53 71.7
PSO017G6030 Papaver somniferum HOM05D005338 ORTHO05D006550 8.4e-14 80.9 53 66.0
ClCG08G015430 Citrullus lanatus HOM05D005338 ORTHO05D006550 1.1e-13 80.5 53 66.0
Ciclev10026443m.g Citrus clementina HOM05D005338 ORTHO05D006550 1.1e-13 80.5 53 66.0
CsaV3_2G028360 Cucumis sativus L. HOM05D005338 ORTHO05D006550 1.1e-13 80.5 53 66.0
CAN.G176.23 Capsicum annuum HOM05D005338 ORTHO05D006550 1.4e-13 80.1 53 67.9
Pp3c14_750 Physcomitrium patens HOM05D005338 ORTHO05D006550 1.9e-13 79.7 53 69.8
Thecc.01G098200 Theobroma cacao HOM05D005338 ORTHO05D006550 3.2e-13 79.0 53 67.9
BolC4t26735H Brassica oleracea HOM05D005338 ORTHO05D006550 4.2e-13 78.6 54 72.2
Sopen00g011030 Solanum pennellii HOM05D005338 ORTHO05D006550 7.1e-13 77.8 53 66.0
Sopen03g010490 Solanum pennellii HOM05D005338 ORTHO05D006550 7.1e-13 77.8 53 66.0
Sopen03g021660 Solanum pennellii HOM05D005338 ORTHO05D006550 7.1e-13 77.8 53 66.0
Zm00001eb236490 Zea mays HOM05D005338 ORTHO05D006550 7.1e-13 77.8 53 71.7
Sopen03g021630 Solanum pennellii HOM05D005338 ORTHO05D006550 1.2e-12 77.0 53 64.2
MD15G1369800 Malus domestica HOM05D005338 ORTHO05D006550 2.7e-12 75.9 56 64.3
Manes.13G095300 Manihot esculenta HOM05D005338 ORTHO05D006550 2.7e-12 75.9 53 67.9
Os02g0193900 Oryza sativa ssp. japonica HOM05D005338 ORTHO05D006550 4.6e-12 75.1 53 69.8
unitig_744.g23988 Utricularia gibba HOM05D005338 ORTHO05D006550 4.6e-12 75.1 54 68.5
HPP92_021909 Vanilla planifolia HOM05D005338 ORTHO05D006550 6.0e-12 74.7 53 66.0
Mapoly0023s0045 Marchantia polymorpha HOM05D005338 ORTHO05D006550 1.8e-11 73.2 53 64.2
Solyc03g046360.3 Solanum lycopersicum HOM05D005338 ORTHO05D006550 6.7e-11 71.2 53 62.3
Haze_25403 Corylus avellana HOM05D005338 ORTHO05D006550 1.1e-10 70.5 112 39.3
Sp4g01410 Schrenkiella parvula HOM05D005338 ORTHO05D006550 1.5e-10 70.1 42 73.8
Ca_02026_v3 Cicer arietinum L. HOM05D005338 ORTHO05D006550 4.3e-10 68.6 45 66.7
SMO236G0045 Selaginella moellendorffii HOM05D005338 ORTHO05D006550 9.0e-08 60.8 53 52.8
AagrBONN_evm.TU.Sc2ySwM_362.1720 Anthoceros agrestis HOM05D005338 ORTHO05D006550 1.2e-07 60.5 55 54.5
SHI19279 Sapria himalayana HOM05D005338 ORTHO05D006550 4.5e-07 58.5 43 65.1
TAR628G1182 Trochodendron aralioides HOM05D005338 ORTHO05D006550 4.5e-07 58.5 56 53.6
Atru.chr12.488 Acer truncatum HOM05D005338 ORTHO05D006550 6.5e-06 54.7 33 72.7


User provided reference genes

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