Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27722 Sequoiadendron giganteum HOM05D003172 ORTHO05D003708 5.7e-62 240.7 121 100.0
PGR142G1025 Punica granatum HOM05D003172 ORTHO05D003708 2.3e-34 149.1 91 84.6
ATR0559G169 Amborella trichopoda HOM05D003172 ORTHO05D003708 3.8e-34 148.3 76 97.4
ATR0697G199 Amborella trichopoda HOM05D003172 ORTHO05D003708 3.8e-34 148.3 76 97.4
CiPaw.09G000900 Carya illinoinensis HOM05D003172 ORTHO05D003708 3.8e-34 148.3 75 98.7
MBI11_g10542_MAGBIO Magnolia biondii HOM05D003172 ORTHO05D003708 3.8e-34 148.3 76 97.4
TAR369G0048 Trochodendron aralioides HOM05D003172 ORTHO05D003708 3.8e-34 148.3 76 97.4
Atru.chr2.1341 Acer truncatum HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
Ah.04g153270 Amaranthus hybridus HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
EL10Ac3g06798 Beta vulgaris HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
Cfa016432 Carpinus fangiana HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
AUR62032669 Chenopodium quinoa HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
Ciclev10018788m.g Citrus clementina HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
FvH4_5g18220 Fragaria vesca HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
FAN04G3171 Fragaria x ananassa HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
FAN08G0762 Fragaria x ananassa HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
FAN13G1822 Fragaria x ananassa HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
FAN18G2753 Fragaria x ananassa HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
MD06G1237800 Malus domestica HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
MD14G1244600 Malus domestica HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
Manes.09G142400 Manihot esculenta HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
Prupe.5G242100 Prunus persica HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
QL07p020343 Quercus lobata HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
RcHm_v2.0_Chr7g0177371 Rosa chinensis HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
Sc19g0006520 Simmondsia chinensis HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
THA.LOC104802864 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 5.0e-34 147.9 91 83.5
Gohir.A13G105600 Gossypium hirsutum HOM05D003172 ORTHO05D003708 6.6e-34 147.5 76 97.4
Gohir.D13G109400 Gossypium hirsutum HOM05D003172 ORTHO05D003708 6.6e-34 147.5 76 97.4
Gorai.013G123000 Gossypium raimondii HOM05D003172 ORTHO05D003708 6.6e-34 147.5 76 97.4
Lalb_Chr14g0364401 Lupinus albus HOM05D003172 ORTHO05D003708 6.6e-34 147.5 91 82.4
Phvul.004G079000 Phaseolus vulgaris HOM05D003172 ORTHO05D003708 6.6e-34 147.5 91 82.4
Actinidia22095 Actinidia chinensis HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Aqoxy2G00568 Aquilegia oxysepala HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
CSS0035842 Camellia sinensis var. sinensis HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
CANSAT78G1302 Cannabis sativa HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
CAN.G662.2 Capsicum annuum HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
CDE04G1193 Ceratophyllum demersum HOM05D003172 ORTHO05D003708 8.6e-34 147.1 75 98.7
CDE07G1719 Ceratophyllum demersum HOM05D003172 ORTHO05D003708 8.6e-34 147.1 75 98.7
Cc06_g21440 Coffea canephora HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
COL.COLO4_13621 Corchorus olitorius HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
DCAR_013693 Daucus carota HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
DCAR_016860 Daucus carota HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Duzib106G1828 Durio zibethinus HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Migut.K00002 Erythranthe guttata HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Migut.N01517 Erythranthe guttata HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Gohir.A11G257900 Gossypium hirsutum HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Gohir.D11G267900 Gossypium hirsutum HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Gorai.007G287600 Gossypium raimondii HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
HanXRQChr09g0266331 Helianthus annuus HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
HanXRQChr14g0438971 Helianthus annuus HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Hma1.2p1_0183F.1_g080920 Hydrangea macrophylla HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Manes.08G149400 Manihot esculenta HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Mapoly0027s0010 Marchantia polymorpha HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Oeu035612.2 Olea europaea HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Os03g0652100 Oryza sativa ssp. japonica HOM05D003172 ORTHO05D003708 8.6e-34 147.1 75 98.7
Peaxi162Scf00076g00918 Petunia axillaris HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Potri.019G032800 Populus trichocarpa HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Rhsim04G0086600 Rhododendron simsii HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Sabra19G0041100 Salix brachista HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Sed0019950 Sechium edule HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Hund24843 Selenicereus undatus HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Solyc12g019860.2 Solanum lycopersicum HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Sopen12g010260 Solanum pennellii HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
SGA_v2.0_scaffold94G28397 Striga asiatica HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Thecc.05G292800 Theobroma cacao HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
vmacro09149 Vaccinium macrocarpon HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
GSVIVG01033382001 Vitis vinifera HOM05D003172 ORTHO05D003708 8.6e-34 147.1 76 96.1
Zm00001eb052870 Zea mays HOM05D003172 ORTHO05D003708 8.6e-34 147.1 75 98.7
Zm00001eb218410 Zea mays HOM05D003172 ORTHO05D003708 8.6e-34 147.1 75 98.7
AL6G29450 Arabidopsis lyrata HOM05D003172 ORTHO05D003708 1.1e-33 146.7 91 82.4
AT5G18230 Arabidopsis thaliana HOM05D003172 ORTHO05D003708 1.1e-33 146.7 91 82.4
BcaB01g05182 Brassica carinata HOM05D003172 ORTHO05D003708 1.1e-33 146.7 91 82.4
BcaNung04945 Brassica carinata HOM05D003172 ORTHO05D003708 1.1e-33 146.7 91 82.4
BcaNung07324 Brassica carinata HOM05D003172 ORTHO05D003708 1.1e-33 146.7 91 82.4
A03p08720 Brassica napus HOM05D003172 ORTHO05D003708 1.1e-33 146.7 91 82.4
C03p10170 Brassica napus HOM05D003172 ORTHO05D003708 1.1e-33 146.7 91 82.4
BolC3t13502H Brassica oleracea HOM05D003172 ORTHO05D003708 1.1e-33 146.7 91 82.4
BraA03t10195Z Brassica rapa HOM05D003172 ORTHO05D003708 1.1e-33 146.7 91 82.4
Cpa.g.sc785.1 Carica papaya HOM05D003172 ORTHO05D003708 1.1e-33 146.7 76 96.1
Lalb_Chr06g0173911 Lupinus albus HOM05D003172 ORTHO05D003708 1.1e-33 146.7 91 83.5
Sp6g26090 Schrenkiella parvula HOM05D003172 ORTHO05D003708 1.1e-33 146.7 91 82.4
arahy.Tifrunner.gnm1.ann1.1H4ABR Arachis hypogaea HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
arahy.Tifrunner.gnm1.ann1.74GIZX Arachis hypogaea HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
arahy.Tifrunner.gnm1.ann1.TX5S28 Arachis hypogaea HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
arahy.Tifrunner.gnm1.ann1.WX09DK Arachis hypogaea HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
Ca_08256_v3 Cicer arietinum L. HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
Glyma.16G042600 Glycine max HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
Glyma.16G152500 Glycine max HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
HanXRQChr09g0252941 Helianthus annuus HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
Lj1g0020713 Lotus japonicus HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
Medtr7g085350 Medicago truncatula HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
Phvul.001G109300 Phaseolus vulgaris HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
Psat3g089480 Pisum sativum HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
THA.LOC104820736 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
TPR.G5918 Trifolium pratense HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
VMungo0464G1094 Vigna mungo HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
VMungo1383G1523 Vigna mungo HOM05D003172 ORTHO05D003708 1.5e-33 146.4 91 82.4
Atru.chr2.1318 Acer truncatum HOM05D003172 ORTHO05D003708 1.9e-33 146.0 75 97.3
Aa31LG11G11360 Aethionema arabicum HOM05D003172 ORTHO05D003708 1.9e-33 146.0 76 96.1
MSTRG.26061 Avicennia marina HOM05D003172 ORTHO05D003708 1.9e-33 146.0 76 94.7
AUR62035298 Chenopodium quinoa HOM05D003172 ORTHO05D003708 1.9e-33 146.0 75 97.3
ClCG10G013300 Citrullus lanatus HOM05D003172 ORTHO05D003708 1.9e-33 146.0 76 94.7
CsaV3_3G043330 Cucumis sativus L. HOM05D003172 ORTHO05D003708 1.9e-33 146.0 76 94.7
Dinv14587 Davidia involucrata HOM05D003172 ORTHO05D003708 1.9e-33 146.0 75 97.3
Dinv37006 Davidia involucrata HOM05D003172 ORTHO05D003708 1.9e-33 146.0 75 97.3
ECA238G3293 Erigeron canadensis HOM05D003172 ORTHO05D003708 1.9e-33 146.0 75 97.3
Glyma.02G071300 Glycine max HOM05D003172 ORTHO05D003708 1.9e-33 146.0 91 82.4
Glyma.19G109500 Glycine max HOM05D003172 ORTHO05D003708 1.9e-33 146.0 91 82.4
Lj2C357G5 Lonicera japonica HOM05D003172 ORTHO05D003708 1.9e-33 146.0 75 97.3
Nn2g15889 Nelumbo nucifera HOM05D003172 ORTHO05D003708 1.9e-33 146.0 75 97.3
Nn7g35818 Nelumbo nucifera HOM05D003172 ORTHO05D003708 1.9e-33 146.0 75 97.3
Oeu026879.1 Olea europaea HOM05D003172 ORTHO05D003708 1.9e-33 146.0 76 94.7
Rhsim03G0000400 Rhododendron simsii HOM05D003172 ORTHO05D003708 1.9e-33 146.0 76 94.7
TWI32G0690 Tripterygium wilfordii HOM05D003172 ORTHO05D003708 1.9e-33 146.0 75 97.3
Actinidia30565 Actinidia chinensis HOM05D003172 ORTHO05D003708 2.5e-33 145.6 75 96.0
Potri.013G059800 Populus trichocarpa HOM05D003172 ORTHO05D003708 2.5e-33 145.6 76 94.7
SGA_v2.0_scaffold274G46522 Striga asiatica HOM05D003172 ORTHO05D003708 2.5e-33 145.6 76 94.7
TWI34G0902 Tripterygium wilfordii HOM05D003172 ORTHO05D003708 2.5e-33 145.6 91 82.4
BcaB08g36694 Brassica carinata HOM05D003172 ORTHO05D003708 3.3e-33 145.2 91 81.3
BcaC04g18714 Brassica carinata HOM05D003172 ORTHO05D003708 3.3e-33 145.2 91 81.3
A10p21290 Brassica napus HOM05D003172 ORTHO05D003708 3.3e-33 145.2 91 81.3
C09p58750 Brassica napus HOM05D003172 ORTHO05D003708 3.3e-33 145.2 91 81.3
Duzib177G0131 Durio zibethinus HOM05D003172 ORTHO05D003708 3.3e-33 145.2 76 94.7
Lalb_Chr21g0317121 Lupinus albus HOM05D003172 ORTHO05D003708 3.3e-33 145.2 91 82.4
THA.LOC104801500 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 3.3e-33 145.2 91 81.3
THA.LOC104805751 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 3.3e-33 145.2 91 81.3
THA.LOC104805989 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 3.3e-33 145.2 91 81.3
TAR623G0379 Trochodendron aralioides HOM05D003172 ORTHO05D003708 3.3e-33 145.2 76 94.7
Mapoly0036s0115 Marchantia polymorpha HOM05D003172 ORTHO05D003708 4.3e-33 144.8 75 96.0
Eucgr.A02083 Eucalyptus grandis HOM05D003172 ORTHO05D003708 5.6e-33 144.4 75 96.0
unitig_26.g9324 Utricularia gibba HOM05D003172 ORTHO05D003708 5.6e-33 144.4 76 94.7
unitig_736.g22311 Utricularia gibba HOM05D003172 ORTHO05D003708 5.6e-33 144.4 76 94.7
CARHR194830 Cardamine hirsuta HOM05D003172 ORTHO05D003708 9.5e-33 143.7 91 80.2
PSO339G0422 Papaver somniferum HOM05D003172 ORTHO05D003708 9.5e-33 143.7 76 93.4
Sed0012949 Sechium edule HOM05D003172 ORTHO05D003708 9.5e-33 143.7 76 94.7
PSO384G1776 Papaver somniferum HOM05D003172 ORTHO05D003708 2.1e-32 142.5 75 94.7
Pp3c24_19770 Physcomitrium patens HOM05D003172 ORTHO05D003708 2.1e-32 142.5 75 94.7
A03p08740 Brassica napus HOM05D003172 ORTHO05D003708 2.8e-32 142.1 76 92.1
HanXRQChr07g0193171 Helianthus annuus HOM05D003172 ORTHO05D003708 2.8e-32 142.1 75 96.0
Lsat_1_v5_gn_2_57861 Lactuca sativa HOM05D003172 ORTHO05D003708 2.8e-32 142.1 78 93.6
AL6G29440 Arabidopsis lyrata HOM05D003172 ORTHO05D003708 3.6e-32 141.7 93 80.6
Carub.0006s1651 Capsella rubella HOM05D003172 ORTHO05D003708 3.6e-32 141.7 93 80.6
Thhalv10012672m.g Eutrema salsugineum HOM05D003172 ORTHO05D003708 3.6e-32 141.7 93 80.6
Haze_19406 Corylus avellana HOM05D003172 ORTHO05D003708 8.0e-32 140.6 88 81.8
HPP92_012145 Vanilla planifolia HOM05D003172 ORTHO05D003708 8.0e-32 140.6 75 94.7
BolC9t58717H Brassica oleracea HOM05D003172 ORTHO05D003708 1.0e-31 140.2 93 79.6
BraA10t44192Z Brassica rapa HOM05D003172 ORTHO05D003708 1.0e-31 140.2 93 79.6
CBR_g17178 Chara braunii HOM05D003172 ORTHO05D003708 1.4e-31 139.8 88 80.7
Pp3c8_22460 Physcomitrium patens HOM05D003172 ORTHO05D003708 1.4e-31 139.8 75 92.0
MELO3C026894.2 Cucumis melo HOM05D003172 ORTHO05D003708 8.9e-31 137.1 88 81.8
Lsat_1_v5_gn_8_47041 Lactuca sativa HOM05D003172 ORTHO05D003708 2.6e-30 135.6 76 88.2
ECA233G5856 Erigeron canadensis HOM05D003172 ORTHO05D003708 3.4e-30 135.2 91 74.7
CARHR217100 Cardamine hirsuta HOM05D003172 ORTHO05D003708 3.7e-29 131.7 91 71.4
Migut.I01216 Erythranthe guttata HOM05D003172 ORTHO05D003708 1.4e-28 129.8 75 88.0
Lsat_1_v5_gn_8_48920 Lactuca sativa HOM05D003172 ORTHO05D003708 1.8e-28 129.4 74 86.5
Lsat_1_v5_gn_8_47061 Lactuca sativa HOM05D000041 ORTHO05D000452 2.4e-28 129.0 75 85.3
Lsat_1_v5_gn_6_36740 Lactuca sativa HOM05D003172 ORTHO05D003708 2.3e-23 112.5 75 81.3
Aa31LG11G11350 Aethionema arabicum HOM05D003172 ORTHO05D003708 5.8e-22 107.8 102 57.8
MCO08G071 Micromonas commoda HOM05D003172 ORTHO05D003708 7.0e-20 100.9 87 57.5
C02p09770 Brassica napus HOM05D003172 ORTHO05D003708 1.2e-19 100.1 73 74.0
SHI23374 Sapria himalayana HOM05D003172 ORTHO05D003708 6.2e-16 87.8 60 75.0
Lsat_1_v5_gn_2_56961 Lactuca sativa HOM05D003172 ORTHO05D003708 8.1e-16 87.4 64 70.3
CBR_g48494 Chara braunii HOM05D003172 ORTHO05D003708 2.3e-15 85.9 72 55.6
SEGI_10741 Sequoiadendron giganteum HOM05D005234 ORTHO05D006583 6.0e-11 71.2 34 94.1
PRCOL_00002674 Prasinoderma coloniale HOM05D003172 ORTHO05D003708 2.5e-09 65.9 76 40.8
SHI23373 Sapria himalayana HOM05D003172 ORTHO05D003708 2.5e-09 65.9 32 96.9
SEGI_20291 Sequoiadendron giganteum HOM05D000089 ORTHO05D000104 9.5e-09 63.9 33 90.9
SEGI_34008 Sequoiadendron giganteum HOM05D000140 ORTHO05D008077 8.1e-08 60.8 29 93.1
SEGI_16582 Sequoiadendron giganteum HOM05D005843 ORTHO05D014789 3.1e-07 58.9 31 87.1
Cre04.g227350 Chlamydomonas reinhardtii HOM05D003172 ORTHO05D003708 1.5e-06 56.6 81 43.2
Nitab4.5_0000001g0360 Nicotiana tabacum HOM05D003172 ORTHO05D003708 3.4e-06 55.5 44 70.5
SEGI_01121 Sequoiadendron giganteum HOM05D004219 ORTHO05D004857 4.4e-06 55.1 29 89.7
SEGI_29889 Sequoiadendron giganteum HOM05D006212 ORTHO05D008245 4.4e-06 55.1 36 72.2


User provided reference genes

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