Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_27520 Sequoiadendron giganteum HOM05D000912 ORTHO05D012941 0.0e+00 1829.3 914 100.0
SEGI_31217 Sequoiadendron giganteum HOM05D000912 ORTHO05D012941 0.0e+00 1437.6 1064 72.2
SEGI_09479 Sequoiadendron giganteum HOM05D000912 ORTHO05D001232 8.3e-81 306.2 953 31.2
SEGI_29442 Sequoiadendron giganteum HOM05D000912 ORTHO05D001232 8.3e-81 306.2 953 31.2
SEGI_27102 Sequoiadendron giganteum HOM05D000912 ORTHO05D001232 8.2e-28 130.2 758 25.1
SEGI_02527 Sequoiadendron giganteum HOM05D000912 ORTHO05D001232 1.2e-23 116.3 377 30.8
Atru.chr3.4082 Acer truncatum HOM05D000912 ORTHO05D001232 8.5e-17 93.6 262 29.0
AagrBONN_evm.TU.Sc2ySwM_117.175 Anthoceros agrestis HOM05D000912 ORTHO05D001232 2.7e-15 88.6 122 41.8
MSTRG.14869 Avicennia marina HOM05D000912 ORTHO05D001232 4.7e-15 87.8 180 32.8
Pp3c12_3460 Physcomitrium patens HOM05D000912 ORTHO05D001232 6.1e-15 87.4 224 26.3
Ciclev10027674m.g Citrus clementina HOM05D000912 ORTHO05D001232 3.0e-14 85.1 164 35.4
Hma1.2p1_0960F.1_g241630 Hydrangea macrophylla HOM05D000912 ORTHO05D001232 3.9e-14 84.7 188 28.7
MCO03G119 Micromonas commoda HOM05D000912 ORTHO05D001232 8.8e-14 83.6 126 38.1
Sc23g0006050 Simmondsia chinensis HOM05D000912 ORTHO05D001232 8.8e-14 83.6 141 31.2
TWI18G1361 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 8.8e-14 83.6 183 31.1
TAR626G1203 Trochodendron aralioides HOM05D000912 ORTHO05D001232 8.8e-14 83.6 137 35.8
TWI12G0824 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 2.0e-13 82.4 176 30.1
TAR383G0444 Trochodendron aralioides HOM05D000912 ORTHO05D001232 2.0e-13 82.4 80 45.0
Actinidia21902 Actinidia chinensis HOM05D000912 ORTHO05D001232 4.4e-13 81.3 136 31.6
BcaB05g25166 Brassica carinata HOM05D000912 ORTHO05D001232 7.4e-13 80.5 168 29.2
Hma1.2p1_0108F.1_g051710 Hydrangea macrophylla HOM05D000912 ORTHO05D001232 7.4e-13 80.5 260 25.4
MCO03G114 Micromonas commoda HOM05D000912 ORTHO05D001232 9.7e-13 80.1 82 45.1
Mapoly0072s0083 Marchantia polymorpha HOM05D000912 ORTHO05D001232 1.7e-12 79.3 88 40.9
TWI75G1589 Tripterygium wilfordii HOM05D000912 ORTHO05D001232 2.2e-12 79.0 187 27.8
A07p44140 Brassica napus HOM05D000912 ORTHO05D001232 2.8e-12 78.6 209 25.8
Dinv20312 Davidia involucrata HOM05D000912 ORTHO05D001232 2.8e-12 78.6 139 33.1
C06p52870 Brassica napus HOM05D000912 ORTHO05D001232 4.8e-12 77.8 267 24.7
Sed0017205 Sechium edule HOM05D000912 ORTHO05D001232 6.3e-12 77.4 182 28.6
BcaC08g47464 Brassica carinata HOM05D000912 ORTHO05D001232 8.2e-12 77.0 267 24.7
BolC6t40305H Brassica oleracea HOM05D000912 ORTHO05D001232 8.2e-12 77.0 267 24.7
Thhalv10018000m.g Eutrema salsugineum HOM05D000912 ORTHO05D001232 8.2e-12 77.0 165 29.1
ATR1125G026 Amborella trichopoda HOM05D000912 ORTHO05D001232 1.1e-11 76.6 139 32.4
BraA07t31922Z Brassica rapa HOM05D000912 ORTHO05D001232 1.1e-11 76.6 209 25.8
Sp5g34050 Schrenkiella parvula HOM05D000912 ORTHO05D001232 1.1e-11 76.6 165 27.9
SGA_v2.0_scaffold49G18366 Striga asiatica HOM05D000912 ORTHO05D001232 1.1e-11 76.6 192 30.7
BolC2t09626H Brassica oleracea HOM05D000912 ORTHO05D001232 1.4e-11 76.3 270 25.9
Duzib192G0163 Durio zibethinus HOM05D000912 ORTHO05D001232 1.4e-11 76.3 183 29.5
Thecc.06G049100 Theobroma cacao HOM05D000912 ORTHO05D001232 1.4e-11 76.3 187 32.1
vmacro12581 Vaccinium macrocarpon HOM05D000912 ORTHO05D001232 1.4e-11 76.3 186 28.0
BcaC03g15858 Brassica carinata HOM05D000912 ORTHO05D001232 1.8e-11 75.9 167 29.3
C02p36130 Brassica napus HOM05D000912 ORTHO05D001232 1.8e-11 75.9 167 29.3
CSS0005184 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 1.8e-11 75.9 92 39.1
CSS0006911 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 1.8e-11 75.9 92 39.1
SGA_v2.0_scaffold73G24406 Striga asiatica HOM05D000912 ORTHO05D001232 1.8e-11 75.9 137 34.3
unitig_62.g23240 Utricularia gibba HOM05D000912 ORTHO05D001232 2.4e-11 75.5 242 30.6
BolC8t51979H Brassica oleracea HOM05D000912 ORTHO05D012941 3.1e-11 75.1 75 44.0
CSS0008849 Camellia sinensis var. sinensis HOM05D000912 ORTHO05D001232 3.1e-11 75.1 187 28.9
Sp1g14860 Schrenkiella parvula HOM05D000912 ORTHO05D001232 3.1e-11 75.1 75 44.0
Sed0017344 Sechium edule HOM05D000912 ORTHO05D001232 3.1e-11 75.1 182 29.1
Aa31LG4G1980 Aethionema arabicum HOM05D000912 ORTHO05D001232 4.1e-11 74.7 77 40.3
Carub.0002s2587 Capsella rubella HOM05D000912 ORTHO05D001232 4.1e-11 74.7 165 28.5
Aa31LG7G1170 Aethionema arabicum HOM05D000912 ORTHO05D001232 5.3e-11 74.3 142 31.7
Aqoxy7G02531 Aquilegia oxysepala HOM05D000912 ORTHO05D001232 5.3e-11 74.3 205 29.8
CARHR072670 Cardamine hirsuta HOM05D000912 ORTHO05D001232 5.3e-11 74.3 77 39.0
Manes.14G000700 Manihot esculenta HOM05D000912 ORTHO05D001232 5.3e-11 74.3 159 32.1
SHI05867 Sapria himalayana HOM05D000912 ORTHO05D001232 5.3e-11 74.3 188 26.6
A02p22450 Brassica napus HOM05D000912 ORTHO05D001232 7.0e-11 73.9 288 24.7
BraA02t07249Z Brassica rapa HOM05D000912 ORTHO05D001232 7.0e-11 73.9 288 24.7
Gohir.D05G117800 Gossypium hirsutum HOM05D000912 ORTHO05D001232 7.0e-11 73.9 131 34.4
HanXRQChr08g0212201 Helianthus annuus HOM05D000912 ORTHO05D001232 7.0e-11 73.9 74 44.6
THA.LOC104813621 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 7.0e-11 73.9 203 29.6
CANSAT01G3172 Cannabis sativa HOM05D000912 ORTHO05D001232 9.1e-11 73.6 188 28.7
Dinv37769 Davidia involucrata HOM05D000912 ORTHO05D001232 9.1e-11 73.6 135 29.6
PSO170G3675 Papaver somniferum HOM05D000912 ORTHO05D001232 9.1e-11 73.6 337 27.3
Actinidia38823 Actinidia chinensis HOM05D000912 ORTHO05D001232 1.2e-10 73.2 136 30.9
Nn2g12790 Nelumbo nucifera HOM05D000912 ORTHO05D001232 1.2e-10 73.2 305 25.9
AL2G39460 Arabidopsis lyrata HOM05D000912 ORTHO05D001232 1.6e-10 72.8 268 25.0
AT1G79000 Arabidopsis thaliana HOM05D000912 ORTHO05D001232 1.6e-10 72.8 268 25.4
Rhsim03G0000100 Rhododendron simsii HOM05D000912 ORTHO05D001232 1.6e-10 72.8 107 38.3
Hund05659 Selenicereus undatus HOM05D000912 ORTHO05D001232 1.6e-10 72.8 177 28.2
CsaV3_3G000040 Cucumis sativus L. HOM05D000912 ORTHO05D001232 2.0e-10 72.4 240 27.5
THA.LOC104808111 Tarenaya hassleriana HOM05D000912 ORTHO05D001232 2.0e-10 72.4 198 28.3
unitig_0.g720 Utricularia gibba HOM05D000912 ORTHO05D001232 2.0e-10 72.4 370 22.2
Aqoxy7G02557 Aquilegia oxysepala HOM05D000912 ORTHO05D001232 2.6e-10 72.0 132 31.8
Gorai.009G121700 Gossypium raimondii HOM05D000912 ORTHO05D001232 2.6e-10 72.0 131 34.4
ClCG10G000030 Citrullus lanatus HOM05D000912 ORTHO05D001232 3.5e-10 71.6 332 25.3
MSTRG.6589 Avicennia marina HOM05D000912 ORTHO05D001232 4.5e-10 71.2 186 31.2
Gohir.A05G116900 Gossypium hirsutum HOM05D000912 ORTHO05D001232 4.5e-10 71.2 252 25.8
A09p60770 Brassica napus HOM05D000912 ORTHO05D001232 5.9e-10 70.9 142 31.0
BraA09t41450Z Brassica rapa HOM05D000912 ORTHO05D001232 5.9e-10 70.9 142 31.0
SGA_v2.0_scaffold181G39745 Striga asiatica HOM05D000912 ORTHO05D001232 5.9e-10 70.9 74 43.2
Oeu054518.1 Olea europaea HOM05D000912 ORTHO05D001232 7.7e-10 70.5 102 36.3
Nitab4.5_0003699g0060 Nicotiana tabacum HOM05D000912 ORTHO05D001232 1.0e-09 70.1 139 32.4
Solyc04g008610.3 Solanum lycopersicum HOM05D000912 ORTHO05D001232 1.0e-09 70.1 194 27.8
C08p17500 Brassica napus HOM05D000912 ORTHO05D001232 1.3e-09 69.7 152 29.6
BolC8t49377H Brassica oleracea HOM05D000912 ORTHO05D001232 1.3e-09 69.7 152 29.6
C08p44370 Brassica napus HOM05D000912 ORTHO05D012941 1.7e-09 69.3 75 41.3
MELO3C013698.2 Cucumis melo HOM05D000912 ORTHO05D001232 1.7e-09 69.3 349 24.6
Pp3c17_2460 Physcomitrium patens HOM05D000912 ORTHO05D001232 1.7e-09 69.3 197 26.9
BcaC05g25532 Brassica carinata HOM05D000912 ORTHO05D001232 2.2e-09 68.9 88 39.8
Sopen04g003770 Solanum pennellii HOM05D000912 ORTHO05D001232 2.2e-09 68.9 194 27.3
Eucgr.F04062 Eucalyptus grandis HOM05D000912 ORTHO05D001232 2.9e-09 68.6 139 28.8
Gorai.010G222100 Gossypium raimondii HOM05D000912 ORTHO05D001232 2.9e-09 68.6 131 32.8
PSO017G2537 Papaver somniferum HOM05D000912 ORTHO05D001232 2.9e-09 68.6 289 27.3
BcaB03g13036 Brassica carinata HOM05D000912 ORTHO05D001232 3.8e-09 68.2 182 29.7
BcaC07g41461 Brassica carinata HOM05D000912 ORTHO05D012941 3.8e-09 68.2 75 40.0
Gohir.A10G000900 Gossypium hirsutum HOM05D000912 ORTHO05D001232 5.0e-09 67.8 181 30.9
Gorai.011G001400 Gossypium raimondii HOM05D000912 ORTHO05D001232 5.0e-09 67.8 181 30.4
HanXRQChr05g0150621 Helianthus annuus HOM05D000912 ORTHO05D001232 5.0e-09 67.8 75 44.0
Nitab4.5_0000069g0570 Nicotiana tabacum HOM05D000912 ORTHO05D001232 5.0e-09 67.8 139 31.7
CAN.G880.12 Capsicum annuum HOM05D000912 ORTHO05D001232 6.5e-09 67.4 141 31.2
Phvul.005G082300 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 6.5e-09 67.4 191 28.3
A08p31320 Brassica napus HOM05D000912 ORTHO05D001232 8.5e-09 67.0 210 27.1
Phvul.010G165900 Phaseolus vulgaris HOM05D000912 ORTHO05D001232 8.5e-09 67.0 74 40.5
arahy.Tifrunner.gnm1.ann1.PZ05LS Arachis hypogaea HOM05D000912 ORTHO05D001232 1.1e-08 66.6 212 27.4
Lsat_1_v5_gn_4_131340 Lactuca sativa HOM05D000912 ORTHO05D001232 1.1e-08 66.6 161 30.4
Manes.14G000600 Manihot esculenta HOM05D000912 ORTHO05D001232 1.1e-08 66.6 335 25.4
C05p14980 Brassica napus HOM05D000912 ORTHO05D001232 1.5e-08 66.2 197 29.9
BolC5t30213H Brassica oleracea HOM05D000912 ORTHO05D001232 1.5e-08 66.2 197 29.9
ECA246G3011 Erigeron canadensis HOM05D000912 ORTHO05D001232 1.5e-08 66.2 241 25.3
Lj3g0006194 Lotus japonicus HOM05D000912 ORTHO05D001232 1.5e-08 66.2 267 25.5
arahy.Tifrunner.gnm1.ann1.DM6RAW Arachis hypogaea HOM05D000912 ORTHO05D001232 1.9e-08 65.9 212 27.4
EL10Ac7g18098 Beta vulgaris HOM05D000912 ORTHO05D001232 1.9e-08 65.9 144 27.1
HanXRQChr11g0326491 Helianthus annuus HOM05D000912 ORTHO05D001232 1.9e-08 65.9 142 28.9
BraA08t35055Z Brassica rapa HOM05D000912 ORTHO05D001232 2.5e-08 65.5 212 27.8
Cre03.g189650 Chlamydomonas reinhardtii HOM05D000912 ORTHO05D001232 2.5e-08 65.5 87 33.3
Ca_03788_v3 Cicer arietinum L. HOM05D000912 ORTHO05D001232 3.2e-08 65.1 264 27.3
Sabra14G0003100 Salix brachista HOM05D000912 ORTHO05D001232 3.2e-08 65.1 197 26.9
Gohir.D10G001100 Gossypium hirsutum HOM05D000912 ORTHO05D001232 4.2e-08 64.7 181 29.8
Psat7g264600 Pisum sativum HOM05D000912 ORTHO05D001232 4.2e-08 64.7 211 28.0
Hund18548 Selenicereus undatus HOM05D000912 ORTHO05D001232 4.2e-08 64.7 178 28.1
Duzib235G0834 Durio zibethinus HOM05D000912 ORTHO05D001232 5.5e-08 64.3 340 26.2
Glyma.08G226700 Glycine max HOM05D000912 ORTHO05D001232 5.5e-08 64.3 215 27.4
Lsat_1_v5_gn_1_24881 Lactuca sativa HOM05D000912 ORTHO05D001232 5.5e-08 64.3 185 30.3
Lalb_Chr19g0140521 Lupinus albus HOM05D000912 ORTHO05D001232 5.5e-08 64.3 213 28.6
BcaC07g38809 Brassica carinata HOM05D000912 ORTHO05D001232 1.2e-07 63.2 217 27.6
Lalb_Chr04g0264771 Lupinus albus HOM05D000912 ORTHO05D001232 1.6e-07 62.8 210 27.1
Medtr4g005050 Medicago truncatula HOM05D000912 ORTHO05D001232 2.1e-07 62.4 188 28.7
BraA06t24428Z Brassica rapa HOM05D000912 ORTHO05D001232 2.7e-07 62.0 195 28.2
COL.COLO4_26805 Corchorus olitorius HOM05D000912 ORTHO05D001232 2.7e-07 62.0 183 28.4
Gohir.A06G182500 Gossypium hirsutum HOM05D000912 ORTHO05D001232 3.6e-07 61.6 278 26.3
Gohir.D06G118100 Gossypium hirsutum HOM05D000912 ORTHO05D001232 3.6e-07 61.6 136 31.6
Ah.15g094210 Amaranthus hybridus HOM05D000912 ORTHO05D001232 8.0e-07 60.5 135 28.1
Glyma.07G000400 Glycine max HOM05D000912 ORTHO05D001232 8.0e-07 60.5 240 26.7
Gorai.010G135700 Gossypium raimondii HOM05D000912 ORTHO05D001232 1.0e-06 60.1 136 31.6
VMungo0331G0786 Vigna mungo HOM05D000912 ORTHO05D001232 1.0e-06 60.1 213 26.8
Gohir.D06G189400 Gossypium hirsutum HOM05D000912 ORTHO05D001232 1.4e-06 59.7 278 25.5
TPR.G38732 Trifolium pratense HOM05D000912 ORTHO05D001232 1.4e-06 59.7 179 29.6
Peaxi162Scf00097g01412 Petunia axillaris HOM05D000912 ORTHO05D001232 1.8e-06 59.3 142 29.6
ATR0598G184 Amborella trichopoda HOM05D000912 ORTHO05D001232 4.0e-06 58.2 191 28.3
A09p60780 Brassica napus HOM05D000912 ORTHO05D012941 8.8e-06 57.0 75 36.0
BraA09t41451Z Brassica rapa HOM05D000912 ORTHO05D012941 8.8e-06 57.0 75 36.0


User provided reference genes

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