Gene: Solyc04g008610.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g008610.3
  • Transcript Identifier Solyc04g008610.3.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 2240410-2256642 : positive

Gene Family Information

  • ID HOM05D000912
  • #Genes/#Species 657/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g008610.3.1
  • uniprot A0A3Q7FY57
  • gene_id Solyc04g008610

Descriptions

  • Description Histone acetyltransferase HAC12 (AHRD V3.3 *** A0A2G2X9A5_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IBA
GOA Databasepositive regulation of transcription by RNA polymerase II
GO:0006357
ISO
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II AT1G79000
GO:0006473
ISO
PLAZA Integrative Orthologyprotein acetylation AT3G12980
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT3G12980
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT1G79000
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT1G79000
GO:0016573
IBA
IEA
GOA Databasehistone acetylation
GO:0016573
IEA
InterProhistone acetylation
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031490
IBA
GOA Databasechromatin DNA binding
GO:0004402
IBA
IEA
GOA Databasehistone acetyltransferase activity
GO:0004402
IEA
InterProhistone acetyltransferase activity
GO:0003713
IBA
GOA Databasetranscription coactivator activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016746
IEA
GOA Databaseacyltransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000123
IBA
GOA Databasehistone acetyltransferase complex
GO:0005667
IBA
GOA Databasetranscription regulator complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035898 TAZ domain superfamily
IPR000197 Zinc finger, TAZ-type
IPR043145 Zinc finger, ZZ-type superfamily
IPR019787 Zinc finger, PHD-finger
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR013178 Histone acetyltransferase Rtt109/CBP
IPR011011 Zinc finger, FYVE/PHD-type
IPR000433 Zinc finger, ZZ-type
Mapman id Description
12.3.1.2 Chromatin organisation.post-translational histone modification.histone acetylation.histone acetyltransferase (HAC/HPCAT)