Gene: COL.COLO4_26805

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_26805
  • Transcript Identifier COL.rna25532
  • Gene Type Coding gene
  • Location AWUE01019384.1 : 6814-20775 : positive

Gene Family Information

  • ID HOM05D000912
  • #Genes/#Species 657/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna25532
  • GenBank OMO73893.1
  • id gene26777
  • gene_name COLO4_26805
  • uniprot A0A1R3HU49

Descriptions

  • Description Zinc finger, TAZ-type
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
ISO
PLAZA Integrative Orthologyregulation of transcription by RNA polymerase II AT1G79000
GO:0006473
ISO
PLAZA Integrative Orthologyprotein acetylation AT3G12980
GO:0009908
ISO
PLAZA Integrative Orthologyflower development AT3G12980
GO:0009294
ISO
PLAZA Integrative OrthologyDNA mediated transformation AT1G79000
GO:0048573
ISO
PLAZA Integrative Orthologyphotoperiodism, flowering AT1G79000
GO:0016573
IEA
GOA Databasehistone acetylation
GO:0016573
IEA
InterProhistone acetylation
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
GOA DatabaseGTP binding
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
GOA DatabaseGTPase activity
GO:0003924
IEA
InterProGTPase activity
GO:0004402
IEA
GOA Databasehistone acetyltransferase activity
GO:0004402
IEA
InterProhistone acetyltransferase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003712
IEA
GOA Databasetranscription coregulator activity
GO:0003712
IEA
InterProtranscription coregulator activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016746
IEA
GOA Databaseacyltransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011011 Zinc finger, FYVE/PHD-type
IPR036529 Coactivator CBP, KIX domain superfamily
IPR035898 TAZ domain superfamily
IPR001965 Zinc finger, PHD-type
IPR000197 Zinc finger, TAZ-type
IPR000433 Zinc finger, ZZ-type
IPR013178 Histone acetyltransferase Rtt109/CBP
IPR000795 Translational (tr)-type GTP-binding domain
IPR043145 Zinc finger, ZZ-type superfamily
IPR019787 Zinc finger, PHD-finger
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
12.3.1.2 Chromatin organisation.post-translational histone modification.histone acetylation.histone acetyltransferase (HAC/HPCAT)