Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 1.6e-138 496.1 258 100.0
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 1.3e-79 300.4 221 68.8
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 4.9e-79 298.5 265 61.9
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 8.4e-79 297.7 218 68.3
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 1.7e-76 290.0 242 62.4
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 6.6e-76 288.1 249 61.4
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 1.9e-75 286.6 218 67.0
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 1.9e-75 286.6 252 60.7
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 2.5e-75 286.2 257 60.7
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 4.3e-75 285.4 240 61.7
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 5.6e-75 285.0 218 66.5
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 6.2e-74 281.6 258 60.5
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 1.8e-73 280.0 261 57.5
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 3.1e-73 279.3 250 60.4
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 4.0e-73 278.9 262 58.4
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 2.0e-72 276.6 256 59.0
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 2.2e-71 273.1 217 63.1
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 2.9e-71 272.7 253 56.1
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 8.4e-71 271.2 242 57.9
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 1.1e-70 270.8 256 57.0
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 1.1e-70 270.8 230 61.7
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 1.9e-70 270.0 222 63.1
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 4.2e-70 268.9 257 56.8
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 5.4e-70 268.5 250 58.0
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 7.1e-70 268.1 199 66.8
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 9.3e-70 267.7 248 58.5
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 2.1e-69 266.5 216 63.4
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 2.1e-69 266.5 259 56.8
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 4.6e-69 265.4 220 64.1
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 2.3e-68 263.1 220 62.3
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 3.0e-68 262.7 218 63.3
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 3.0e-68 262.7 222 60.4
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 3.9e-68 262.3 246 57.7
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 3.9e-68 262.3 253 56.9
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 3.9e-68 262.3 246 55.7
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 5.1e-68 261.9 243 57.6
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 5.1e-68 261.9 242 55.8
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 6.6e-68 261.5 253 56.5
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 6.6e-68 261.5 228 59.6
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 8.7e-68 261.2 211 59.7
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 1.1e-67 260.8 251 57.4
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 1.1e-67 260.8 218 61.0
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 1.5e-67 260.4 229 59.4
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 2.5e-67 259.6 210 61.0
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 2.5e-67 259.6 262 54.2
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 2.5e-67 259.6 251 54.6
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 4.3e-67 258.8 251 55.4
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 5.6e-67 258.5 252 56.0
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 7.3e-67 258.1 251 56.6
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 2.1e-66 256.5 223 60.1
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 3.6e-66 255.8 250 56.4
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 3.6e-66 255.8 241 57.3
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 3.6e-66 255.8 254 52.8
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 3.6e-66 255.8 257 56.4
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 6.2e-66 255.0 251 56.6
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 8.1e-66 254.6 250 54.0
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.1e-65 254.2 209 61.7
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 2.4e-65 253.1 242 56.6
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 5.3e-65 251.9 242 55.8
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 5.3e-65 251.9 206 60.2
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 5.3e-65 251.9 206 60.2
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 5.3e-65 251.9 215 60.5
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 5.3e-65 251.9 251 52.6
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 5.3e-65 251.9 261 55.2
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 6.9e-65 251.5 206 60.2
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 6.9e-65 251.5 215 58.6
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 1.5e-64 250.4 200 65.0
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 2.0e-64 250.0 253 55.3
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 2.6e-64 249.6 201 65.2
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 2.6e-64 249.6 254 54.3
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 2.6e-64 249.6 254 53.9
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 7.6e-64 248.1 232 53.9
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 9.9e-64 247.7 255 49.8
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 9.9e-64 247.7 251 54.6
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 2.2e-63 246.5 262 49.6
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 2.9e-63 246.1 160 74.4
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 6.4e-63 245.0 263 52.5
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 6.4e-63 245.0 230 56.5
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 8.4e-63 244.6 262 52.7
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 8.4e-63 244.6 241 56.0
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 1.1e-62 244.2 258 51.6
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 1.9e-62 243.4 228 58.3
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 1.2e-61 240.7 215 60.0
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.2e-61 240.7 250 50.8
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 1.2e-61 240.7 222 52.3
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 1.2e-61 240.7 220 57.7
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 7.9e-61 238.0 230 53.9
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 7.9e-61 238.0 198 60.1
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 1.0e-60 237.7 233 57.1
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 5.1e-60 235.3 256 52.3
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 5.1e-60 235.3 261 50.6
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 6.7e-60 235.0 246 52.8
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 1.9e-59 233.4 199 59.3
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 1.9e-59 233.4 201 60.7
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 1.6e-58 230.3 227 53.3
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 4.8e-58 228.8 256 50.0
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 4.0e-57 225.7 219 52.5
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 1.2e-56 224.2 207 55.6
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 1.5e-56 223.8 249 49.4
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 2.6e-56 223.0 226 51.8
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 3.4e-56 222.6 228 53.1
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 1.0e-55 221.1 261 48.3
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 2.9e-55 219.5 183 63.4
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 1.4e-54 217.2 199 56.3
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.9e-54 216.9 224 52.7
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 1.9e-54 216.9 215 55.3
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 3.2e-54 216.1 221 51.6
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 4.2e-54 215.7 224 51.3
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 7.1e-54 214.9 226 53.5
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 2.1e-53 213.4 256 47.7
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 6.0e-53 211.8 158 63.3
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 7.9e-53 211.5 221 51.1
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 3.7e-50 202.6 187 55.1
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 8.2e-50 201.4 215 53.0
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 1.1e-49 201.1 170 60.6
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 9.0e-49 198.0 166 60.2
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 1.5e-48 197.2 231 48.1
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 1.3e-47 194.1 232 45.7
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 3.8e-47 192.6 169 54.4
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 8.4e-47 191.4 172 57.6
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 5.7e-43 178.7 187 55.1
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 1.2e-40 171.0 122 66.4
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 5.0e-31 139.0 187 43.9
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 3.2e-30 136.3 256 38.7
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 1.2e-29 134.4 129 55.0
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 3.6e-29 132.9 131 54.2
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 4.7e-29 132.5 116 59.5
SpUn0233_0020 Schrenkiella parvula HOM05D005088 ORTHO05D006914 1.0e-28 131.3 136 52.9
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 5.9e-24 115.5 184 41.8
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 3.8e-23 112.8 135 47.4
Sed0009105 Sechium edule HOM05D005088 ORTHO05D006914 5.7e-19 99.0 154 42.9
Oeu060752.1 Olea europaea HOM05D005088 ORTHO05D006914 7.0e-17 92.0 137 40.9
Manes.17G110201 Manihot esculenta HOM05D005088 ORTHO05D006914 8.0e-13 78.6 71 60.6
SMO235G0038 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 1.2e-08 64.7 94 42.6


User provided reference genes

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