Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26510 Sequoiadendron giganteum HOM05D003955 ORTHO05D004684 1.2e-204 716.5 398 100.0
TAR622G0688 Trochodendron aralioides HOM05D003955 ORTHO05D004684 7.5e-127 458.0 360 64.4
ATR0686G116 Amborella trichopoda HOM05D003955 ORTHO05D004684 3.1e-125 452.6 351 61.3
Actinidia18907 Actinidia chinensis HOM05D003955 ORTHO05D004684 3.5e-124 449.1 360 61.9
Aqoxy3G04013 Aquilegia oxysepala HOM05D003955 ORTHO05D004684 3.8e-123 445.7 352 64.8
TAR374G0009 Trochodendron aralioides HOM05D003955 ORTHO05D004684 1.1e-122 444.1 352 62.8
Rhsim12G0139700 Rhododendron simsii HOM05D003955 ORTHO05D004684 3.2e-122 442.6 351 63.2
PSO063G1948 Papaver somniferum HOM05D003955 ORTHO05D004684 4.2e-122 442.2 352 59.7
TWI15G0606 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 7.2e-122 441.4 360 56.9
PSO782G1387 Papaver somniferum HOM05D003955 ORTHO05D004684 9.4e-122 441.0 352 58.8
GSVIVG01008399001 Vitis vinifera HOM05D003955 ORTHO05D004684 3.6e-121 439.1 352 61.1
Cpa.g.sc3.440 Carica papaya HOM05D003955 ORTHO05D004684 1.4e-120 437.2 350 59.4
Prupe.5G230600 Prunus persica HOM05D003955 ORTHO05D004684 1.4e-120 437.2 350 64.0
vmacro16423 Vaccinium macrocarpon HOM05D003955 ORTHO05D004684 1.8e-120 436.8 351 61.5
Glyma.05G243900 Glycine max HOM05D003955 ORTHO05D004684 3.0e-120 436.0 351 58.4
Glyma.08G051900 Glycine max HOM05D003955 ORTHO05D004684 8.8e-120 434.5 350 58.0
CDE04G0774 Ceratophyllum demersum HOM05D003955 ORTHO05D004684 1.5e-119 433.7 350 62.6
MD14G1234400 Malus domestica HOM05D003955 ORTHO05D004684 1.5e-119 433.7 350 61.1
QL10p027883 Quercus lobata HOM05D003955 ORTHO05D004684 1.5e-119 433.7 351 63.2
MD06G1229500 Malus domestica HOM05D003955 ORTHO05D004684 2.0e-119 433.3 350 62.6
Manes.06G008300 Manihot esculenta HOM05D003955 ORTHO05D004684 3.4e-119 432.6 352 61.4
VMungo0251G3447 Vigna mungo HOM05D003955 ORTHO05D004684 7.5e-119 431.4 350 57.4
Cfa019689 Carpinus fangiana HOM05D003955 ORTHO05D004684 9.8e-119 431.0 352 61.6
CiPaw.15G139700 Carya illinoinensis HOM05D003955 ORTHO05D004684 3.7e-118 429.1 349 63.0
Thecc.03G050300 Theobroma cacao HOM05D003955 ORTHO05D004684 3.7e-118 429.1 352 56.8
Potri.012G049200 Populus trichocarpa HOM05D003955 ORTHO05D004684 6.3e-118 428.3 352 61.4
Lj6A27G8 Lonicera japonica HOM05D003955 ORTHO05D004684 1.1e-117 427.6 356 59.8
Phvul.002G327600 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 1.8e-117 426.8 348 60.9
Gohir.A11G004000 Gossypium hirsutum HOM05D003955 ORTHO05D004684 2.4e-117 426.4 351 57.0
Oeu061232.2 Olea europaea HOM05D003955 ORTHO05D004684 2.4e-117 426.4 377 55.7
COL.COLO4_20464 Corchorus olitorius HOM05D003955 ORTHO05D004684 4.1e-117 425.6 360 54.4
Gorai.007G004500 Gossypium raimondii HOM05D003955 ORTHO05D004684 4.1e-117 425.6 351 57.3
Nitab4.5_0001158g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 5.4e-117 425.2 346 57.8
Lalb_Chr05g0221841 Lupinus albus HOM05D003955 ORTHO05D004684 7.0e-117 424.9 351 56.7
Nitab4.5_0001644g0090 Nicotiana tabacum HOM05D003955 ORTHO05D004684 7.0e-117 424.9 346 57.8
Peaxi162Scf00683g00157 Petunia axillaris HOM05D003955 ORTHO05D004684 1.6e-116 423.7 347 62.2
MELO3C017347.2 Cucumis melo HOM05D003955 ORTHO05D004684 2.0e-116 423.3 352 56.5
Haze_18797 Corylus avellana HOM05D003955 ORTHO05D004684 3.5e-116 422.5 355 60.0
CsaV3_1G004220 Cucumis sativus L. HOM05D003955 ORTHO05D004684 4.5e-116 422.2 352 56.0
Hma1.2p1_0669F.1_g200270 Hydrangea macrophylla HOM05D003955 ORTHO05D004684 4.5e-116 422.2 362 58.6
Solyc03g119090.3 Solanum lycopersicum HOM05D003955 ORTHO05D004684 5.9e-116 421.8 346 56.9
Dinv05158 Davidia involucrata HOM05D003955 ORTHO05D004684 7.7e-116 421.4 353 56.1
Gohir.D11G003500 Gossypium hirsutum HOM05D003955 ORTHO05D004684 7.7e-116 421.4 352 56.2
CANSAT80G2537 Cannabis sativa HOM05D003955 ORTHO05D004684 1.3e-115 420.6 352 56.2
Potri.015G041200 Populus trichocarpa HOM05D003955 ORTHO05D004684 1.3e-115 420.6 352 61.1
Sed0014282 Sechium edule HOM05D003955 ORTHO05D004684 1.3e-115 420.6 353 55.5
Sopen03g037980 Solanum pennellii HOM05D003955 ORTHO05D004684 1.3e-115 420.6 346 56.6
Lj4g0027787 Lotus japonicus HOM05D003955 ORTHO05D004684 2.9e-115 419.5 351 55.8
MSTRG.9290 Avicennia marina HOM05D003955 ORTHO05D004684 3.8e-115 419.1 360 56.1
Ciclev10007782m.g Citrus clementina HOM05D003955 ORTHO05D004684 3.8e-115 419.1 350 55.1
Lj2A556T29 Lonicera japonica HOM05D003955 ORTHO05D004684 5.0e-115 418.7 356 57.3
Thecc.02G279800 Theobroma cacao HOM05D003955 ORTHO05D004684 6.6e-115 418.3 352 56.2
Sabra12G0034600 Salix brachista HOM05D003955 ORTHO05D004684 8.6e-115 417.9 365 54.2
Gorai.002G180400 Gossypium raimondii HOM05D003955 ORTHO05D004684 1.1e-114 417.5 360 54.4
RcHm_v2.0_Chr7g0178701 Rosa chinensis HOM05D003955 ORTHO05D004684 1.1e-114 417.5 351 61.0
TWI81G0555 Tripterygium wilfordii HOM05D003955 ORTHO05D004684 1.1e-114 417.5 358 54.5
COL.COLO4_22318 Corchorus olitorius HOM05D003955 ORTHO05D004684 1.5e-114 417.2 373 54.2
Manes.15G126700 Manihot esculenta HOM05D003955 ORTHO05D004684 2.5e-114 416.4 352 57.1
Hund24990 Selenicereus undatus HOM05D003955 ORTHO05D004684 2.5e-114 416.4 360 57.5
CSS0005322 Camellia sinensis var. sinensis HOM05D003955 ORTHO05D004684 3.3e-114 416.0 352 55.7
Ca_17215_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 4.2e-114 415.6 351 55.6
Ca_17217_v3 Cicer arietinum L. HOM05D003955 ORTHO05D004684 4.2e-114 415.6 351 55.6
PGSC0003DMG400005655 Solanum tuberosum HOM05D003955 ORTHO05D004684 4.2e-114 415.6 345 56.2
Medtr8g106820 Medicago truncatula HOM05D003955 ORTHO05D004684 7.2e-114 414.8 351 55.0
Sed0001638 Sechium edule HOM05D003955 ORTHO05D004684 9.5e-114 414.5 352 55.4
ClCG06G014440 Citrullus lanatus HOM05D003955 ORTHO05D004684 1.6e-113 413.7 349 55.3
Psat7g000120 Pisum sativum HOM05D003955 ORTHO05D004684 1.6e-113 413.7 351 55.0
Eucgr.K02263 Eucalyptus grandis HOM05D003955 ORTHO05D004684 2.1e-113 413.3 349 58.7
TPR.G12969 Trifolium pratense HOM05D003955 ORTHO05D004684 2.1e-113 413.3 351 57.5
FAN18G0775 Fragaria x ananassa HOM05D003955 ORTHO05D004684 2.8e-113 412.9 350 61.1
PGR083G2578 Punica granatum HOM05D003955 ORTHO05D004684 2.8e-113 412.9 347 54.8
Medtr1g107560 Medicago truncatula HOM05D003955 ORTHO05D004684 3.6e-113 412.5 360 55.0
Sp3g16180 Schrenkiella parvula HOM05D003955 ORTHO05D004684 1.0e-112 411.0 353 56.1
CARHR093380 Cardamine hirsuta HOM05D003955 ORTHO05D004684 1.4e-112 410.6 353 55.5
Migut.D01456 Erythranthe guttata HOM05D003955 ORTHO05D004684 1.4e-112 410.6 352 54.8
Thhalv10020321m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 1.4e-112 410.6 353 55.5
FvH4_5g17110 Fragaria vesca HOM05D003955 ORTHO05D004684 1.4e-112 410.6 350 60.9
Aa31LG8G4920 Aethionema arabicum HOM05D003955 ORTHO05D004684 3.0e-112 409.5 351 55.0
AUR62041238 Chenopodium quinoa HOM05D003955 ORTHO05D004684 3.0e-112 409.5 352 54.5
Os01g0125800 Oryza sativa ssp. japonica HOM05D003955 ORTHO05D004684 5.2e-112 408.7 351 53.0
Lsat_1_v5_gn_5_91461 Lactuca sativa HOM05D003955 ORTHO05D004684 6.8e-112 408.3 352 52.8
THA.LOC104820357 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 6.8e-112 408.3 351 55.0
HanXRQChr10g0314661 Helianthus annuus HOM05D003955 ORTHO05D004684 3.4e-111 406.0 352 52.6
SGA_v2.0_scaffold25G10972 Striga asiatica HOM05D003955 ORTHO05D004684 3.4e-111 406.0 350 56.3
Zm00001eb334960 Zea mays HOM05D003955 ORTHO05D004684 4.4e-111 405.6 350 52.6
Carub.0003s1778 Capsella rubella HOM05D003955 ORTHO05D004684 9.8e-111 404.4 351 54.4
Cpa.g.sc211.2 Carica papaya HOM05D003955 ORTHO05D004684 2.2e-110 403.3 342 54.7
AUR62014196 Chenopodium quinoa HOM05D003955 ORTHO05D004684 2.2e-110 403.3 360 53.6
Hund20686 Selenicereus undatus HOM05D003955 ORTHO05D004684 2.2e-110 403.3 352 54.3
AT3G18060 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 4.9e-110 402.1 349 55.3
Zm00001eb125700 Zea mays HOM05D003955 ORTHO05D004684 4.9e-110 402.1 350 51.7
AL3G31220 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 6.3e-110 401.7 351 54.1
Ah.03g138590 Amaranthus hybridus HOM05D003955 ORTHO05D004684 8.3e-110 401.4 350 54.3
BolC5t33552H Brassica oleracea HOM05D003955 ORTHO05D004684 8.3e-110 401.4 352 54.5
Dinv26502 Davidia involucrata HOM05D003955 ORTHO05D004684 8.3e-110 401.4 350 60.0
A05p31710 Brassica napus HOM05D003955 ORTHO05D004684 1.1e-109 401.0 353 54.4
BraA05t22004Z Brassica rapa HOM05D003955 ORTHO05D004684 1.1e-109 401.0 353 54.4
Glyma.20G126400 Glycine max HOM05D003955 ORTHO05D004684 1.1e-109 401.0 353 54.1
Sabra15G0063600 Salix brachista HOM05D003955 ORTHO05D004684 1.1e-109 401.0 358 57.3
FAN04G3226 Fragaria x ananassa HOM05D003955 ORTHO05D004684 1.4e-109 400.6 361 58.4
DCAR_014770 Daucus carota HOM05D003955 ORTHO05D004684 2.4e-109 399.8 352 53.4
FAN08G2535 Fragaria x ananassa HOM05D003955 ORTHO05D004684 2.4e-109 399.8 361 58.7
Atru.chr11.420 Acer truncatum HOM05D003955 ORTHO05D004684 3.2e-109 399.4 352 53.7
FAN13G1787 Fragaria x ananassa HOM05D003955 ORTHO05D004684 5.4e-109 398.7 361 58.4
C05p48110 Brassica napus HOM05D003955 ORTHO05D004684 7.0e-109 398.3 353 54.1
Sc11g0004100 Simmondsia chinensis HOM05D003955 ORTHO05D004684 9.2e-109 397.9 352 54.8
Lalb_Chr06g0165551 Lupinus albus HOM05D003955 ORTHO05D004684 2.0e-108 396.7 352 53.7
Ciclev10014635m.g Citrus clementina HOM05D003955 ORTHO05D004684 2.7e-108 396.4 353 52.7
Lj5g0018825 Lotus japonicus HOM05D003955 ORTHO05D004684 3.9e-107 392.5 342 53.2
arahy.Tifrunner.gnm1.ann1.I5E1T8 Arachis hypogaea HOM05D003955 ORTHO05D004684 5.0e-107 392.1 353 52.4
DCAR_023230 Daucus carota HOM05D003955 ORTHO05D004684 6.6e-107 391.7 352 52.3
TPR.G13862 Trifolium pratense HOM05D003955 ORTHO05D004684 4.3e-106 389.0 352 51.7
Sabra15G0055900 Salix brachista HOM05D003955 ORTHO05D004684 2.1e-105 386.7 403 50.9
Psat6g220280 Pisum sativum HOM05D003955 ORTHO05D004684 2.8e-105 386.3 351 52.1
ECA234G1883 Erigeron canadensis HOM05D003955 ORTHO05D004684 1.4e-104 384.0 341 52.8
Phvul.007G038100 Phaseolus vulgaris HOM05D003955 ORTHO05D004684 4.0e-104 382.5 342 52.9
VMungo0720G1874 Vigna mungo HOM05D003955 ORTHO05D004684 1.2e-103 380.9 351 51.9
EL10Ac6g14239 Beta vulgaris HOM05D003955 ORTHO05D004684 1.5e-103 380.6 336 53.3
arahy.Tifrunner.gnm1.ann1.MW1RK6 Arachis hypogaea HOM05D003955 ORTHO05D004684 2.0e-103 380.2 366 50.0
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 2.0e-103 380.2 353 52.1
Pp3c3_9960 Physcomitrium patens HOM05D003955 ORTHO05D004684 1.3e-102 377.5 351 51.9
Carub.0005s0030 Capsella rubella HOM05D003955 ORTHO05D004684 3.2e-101 372.9 351 51.3
CARHR143850 Cardamine hirsuta HOM05D003955 ORTHO05D004684 4.1e-101 372.5 352 51.7
Thhalv10000821m.g Eutrema salsugineum HOM05D003955 ORTHO05D004684 4.6e-100 369.0 350 54.6
Sp2g12780 Schrenkiella parvula HOM05D003955 ORTHO05D004684 6.0e-100 368.6 350 53.7
AL5G10290 Arabidopsis lyrata HOM05D003955 ORTHO05D004684 1.3e-99 367.5 351 51.6
Aa31LG2G8590 Aethionema arabicum HOM05D003955 ORTHO05D004684 3.0e-99 366.3 384 47.9
C09p30050 Brassica napus HOM05D003955 ORTHO05D004684 3.9e-99 365.9 352 50.9
BolC9t55869H Brassica oleracea HOM05D003955 ORTHO05D004684 3.9e-99 365.9 352 50.9
AT2G01330 Arabidopsis thaliana HOM05D003955 ORTHO05D004684 1.1e-98 364.4 351 51.6
A09p23310 Brassica napus HOM05D003955 ORTHO05D004684 1.1e-98 364.4 352 50.6
BcaC04g21593 Brassica carinata HOM05D003955 ORTHO05D004684 1.9e-98 363.6 352 50.3
BraA09t37932Z Brassica rapa HOM05D003955 ORTHO05D004684 7.3e-98 361.7 352 50.0
BcaB07g30749 Brassica carinata HOM05D003955 ORTHO05D004684 1.1e-96 357.8 350 50.6
Mapoly0025s0096 Marchantia polymorpha HOM05D003955 ORTHO05D004684 2.0e-95 353.6 364 48.9
Nn4g24112 Nelumbo nucifera HOM05D003955 ORTHO05D004684 5.8e-95 352.1 297 57.2
THA.LOC104823875 Tarenaya hassleriana HOM05D003955 ORTHO05D004684 8.3e-94 348.2 350 49.7
Oeu031790.1 Olea europaea HOM05D003955 ORTHO05D004684 2.7e-92 343.2 360 47.8
Atru.chr9.1765 Acer truncatum HOM05D003955 ORTHO05D004684 1.0e-91 341.3 267 58.8
Gohir.A01G153300 Gossypium hirsutum HOM05D003955 ORTHO05D004684 1.6e-84 317.4 270 54.8
Gohir.D01G099700 Gossypium hirsutum HOM05D003955 ORTHO05D004684 4.6e-84 315.8 270 54.8
CBR_g51409 Chara braunii HOM05D003955 ORTHO05D004684 3.9e-83 312.8 357 50.4
AagrBONN_evm.TU.Sc2ySwM_340.157 Anthoceros agrestis HOM05D003955 ORTHO05D004684 1.2e-81 307.8 359 49.6
SMO298G0047 Selaginella moellendorffii HOM05D003955 ORTHO05D004684 2.1e-73 280.4 367 43.1
Cc04_g06580 Coffea canephora HOM05D003955 ORTHO05D004684 4.4e-71 272.7 216 61.6
PRCOL_00004882 Prasinoderma coloniale HOM05D003955 ORTHO05D004684 4.3e-42 176.4 342 36.8
Actinidia35113 Actinidia chinensis HOM05D003955 ORTHO05D004684 2.8e-41 173.7 144 58.3
BolC5t33521H Brassica oleracea HOM05D003955 ORTHO05D004684 4.2e-37 159.8 144 53.5
HPP92_000152 Vanilla planifolia HOM05D003955 ORTHO05D004684 1.4e-35 154.8 135 50.4
Cc04_g06570 Coffea canephora HOM05D003955 ORTHO05D004684 3.9e-35 153.3 140 52.1
BcaB03g13114 Brassica carinata HOM05D003955 ORTHO05D030800 2.4e-32 144.1 160 44.4
MCO02G121 Micromonas commoda HOM05D003955 ORTHO05D004684 7.9e-28 129.0 391 30.9
Zm00001eb221950 Zea mays HOM05D003955 ORTHO05D004684 9.1e-24 115.5 94 53.2
Oeu013618.1 Olea europaea HOM05D003955 ORTHO05D004684 8.5e-22 109.0 102 52.0
BcaB07g32970 Brassica carinata HOM05D003955 ORTHO05D004684 8.8e-19 99.0 165 37.0
Haze_27019 Corylus avellana HOM05D003955 ORTHO05D004684 1.1e-18 98.6 248 27.8
Atru.chr5.1031 Acer truncatum HOM05D003955 ORTHO05D030800 4.8e-17 93.2 77 54.5
Actinidia37891 Actinidia chinensis HOM05D003955 ORTHO05D030800 1.1e-13 82.0 52 61.5
Atru.chr9.1764 Acer truncatum HOM05D003955 ORTHO05D004684 5.7e-10 69.7 46 65.2
COL.COLO4_22316 Corchorus olitorius HOM05D003955 ORTHO05D004684 4.5e-07 60.1 43 58.1
Sp6g12330 Schrenkiella parvula HOM05D000464 ORTHO05D006292 5.9e-07 59.7 279 24.0
Actinidia03814 Actinidia chinensis HOM05D002634 ORTHO05D003100 2.2e-06 57.8 150 24.0
Actinidia08243 Actinidia chinensis HOM05D002634 ORTHO05D003100 2.2e-06 57.8 150 24.0
SalBow2G1176 Salvia bowleyana HOM05D003006 ORTHO05D003438 2.2e-06 57.8 274 22.6
MSTRG.22719 Avicennia marina HOM05D003006 ORTHO05D003438 3.8e-06 57.0 272 22.8
Thhalv10013321m.g Eutrema salsugineum HOM05D000464 ORTHO05D006292 3.8e-06 57.0 279 23.3
CARHR258380 Cardamine hirsuta HOM05D000464 ORTHO05D006292 5.0e-06 56.6 279 22.6


User provided reference genes

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