Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 2681.0 1344 100.0
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 0.0e+00 1320.8 665 100.0
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 0.0e+00 1230.3 1254 52.4
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 0.0e+00 1193.3 1257 51.0
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1192.9 1253 51.5
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 0.0e+00 1189.9 1223 51.3
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 0.0e+00 1189.9 1260 51.0
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 0.0e+00 1184.1 1257 50.3
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1157.5 1255 49.2
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 0.0e+00 1156.7 1258 49.8
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 0.0e+00 1149.8 1254 49.8
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 0.0e+00 1148.7 1257 50.4
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 0.0e+00 1146.0 1255 49.9
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 0.0e+00 1144.8 1260 48.8
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 0.0e+00 1143.6 1255 50.8
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 0.0e+00 1135.9 1253 49.6
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 0.0e+00 1135.2 1254 49.2
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 0.0e+00 1134.8 1260 49.6
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 0.0e+00 1130.2 1258 49.7
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 0.0e+00 1130.2 1253 49.6
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 0.0e+00 1128.6 1258 50.0
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 0.0e+00 1125.5 1272 48.1
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 0.0e+00 1124.8 1254 49.8
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 0.0e+00 1124.4 1252 48.9
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1124.0 1265 48.4
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 0.0e+00 1120.5 1253 49.1
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 0.0e+00 1119.0 1252 47.9
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 0.0e+00 1118.2 1256 49.0
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 0.0e+00 1114.8 1255 47.8
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 0.0e+00 1114.0 1254 47.4
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 0.0e+00 1114.0 1204 49.8
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1113.2 1265 47.6
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 0.0e+00 1113.2 1293 47.0
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 0.0e+00 1113.2 1255 48.3
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 0.0e+00 1109.7 1264 49.0
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1109.7 1267 48.0
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1108.6 1282 48.0
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 0.0e+00 1106.7 1255 48.4
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 0.0e+00 1106.3 1264 48.6
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 0.0e+00 1105.9 1282 47.9
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1105.1 1282 47.9
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 0.0e+00 1103.2 1254 47.7
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1102.8 1282 47.7
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1102.8 1274 48.0
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 0.0e+00 1102.0 1257 48.8
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 0.0e+00 1100.1 1282 47.8
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 0.0e+00 1099.7 1256 47.9
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 0.0e+00 1099.3 1253 47.2
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 0.0e+00 1098.6 1258 47.1
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 0.0e+00 1097.0 1257 47.6
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 0.0e+00 1096.6 1258 47.5
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 0.0e+00 1095.9 1265 47.8
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 0.0e+00 1095.5 1257 48.4
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 0.0e+00 1094.7 1259 46.8
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 0.0e+00 1093.6 1257 47.3
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 0.0e+00 1092.0 1257 47.1
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 0.0e+00 1090.1 1258 47.6
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 0.0e+00 1083.9 1262 46.4
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 0.0e+00 1082.4 1254 47.1
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 0.0e+00 1080.9 1258 46.6
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 0.0e+00 1079.3 1200 49.0
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 9.2e-312 1074.3 1253 46.0
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 9.2e-312 1073.5 1249 47.2
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 1.8e-311 1073.2 1203 48.2
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 8.3e-311 1070.8 1268 47.1
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 1.1e-310 1070.5 1266 46.8
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 2.4e-310 1069.3 1263 47.3
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 2.4e-310 1069.3 1259 46.8
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 5.3e-310 1068.1 1261 47.1
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 7.0e-310 1067.8 1265 47.0
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 1.2e-309 1067.0 1254 46.5
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 2.6e-309 1065.8 1175 49.1
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 3.4e-309 1065.4 1262 47.1
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 1.0e-308 1063.9 1265 46.9
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 1.7e-308 1063.1 1168 50.1
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 2.2e-308 1062.8 1259 46.9
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 2.9e-308 1062.4 1185 49.1
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 2.9e-308 1062.4 1258 46.6
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 3.2e-307 1058.9 1257 47.3
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 1.2e-306 1057.0 1262 46.6
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 6.1e-306 1054.7 1258 46.3
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.8e-305 1053.1 1195 48.3
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 1.1e-304 1050.4 1255 47.0
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 3.1e-302 1042.3 1257 46.9
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 1.2e-301 1040.4 1259 46.5
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 1.2e-301 1040.4 1260 46.6
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 2.7e-293 1012.7 1251 45.9
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 2.4e-286 989.6 1260 45.1
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 3.6e-282 975.7 1294 43.3
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 1.6e-277 960.3 1256 44.3
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 4.7e-274 948.7 1049 48.3
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 1.8e-273 946.8 1023 49.7
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 1.5e-272 943.7 1077 48.3
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 1.4e-270 937.2 1260 43.8
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 4.1e-270 935.6 1020 49.2
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 4.1e-270 935.6 1334 41.4
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 8.3e-263 911.4 1034 46.6
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 4.1e-254 882.5 1016 46.2
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 4.6e-245 852.4 1089 43.8
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 3.3e-243 846.3 1257 41.7
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 4.4e-240 835.9 1290 38.0
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 2.3e-236 823.5 1092 42.2
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 2.3e-236 823.5 1012 45.5
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 1.8e-220 770.8 967 45.5
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 6.3e-202 709.1 754 51.6
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 7.4e-195 685.6 667 54.7
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 1.9e-174 617.8 1469 30.8
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 1.4e-172 611.7 915 39.3
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 4.2e-97 360.9 316 59.2
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 3.3e-94 351.3 1433 26.7
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 6.5e-90 337.0 381 46.7
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 3.3e-86 324.7 1422 25.2
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 3.6e-72 278.1 1249 25.3
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 7.2e-65 253.8 222 57.2
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 2.6e-54 218.8 249 45.0
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 9.2e-52 210.3 259 44.4
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 5.6e-49 201.1 1272 24.8
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 4.9e-37 161.4 136 62.5
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 1.1e-36 160.2 136 62.5
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 3.1e-31 142.1 139 59.0
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 2.9e-29 135.6 130 56.2
Psat2g034240 Pisum sativum HOM05D006356 ORTHO05D007903 6.4e-29 134.4 335 30.7
Psat0s3149g0040 Pisum sativum HOM05D006356 ORTHO05D007903 3.3e-17 95.5 218 32.1
Psat0s3149g0080 Pisum sativum HOM05D006356 ORTHO05D007903 4.9e-13 81.6 234 29.5
Lj5g0016728 Lotus japonicus HOM05D006356 ORTHO05D007903 1.2e-06 60.5 95 37.9


User provided reference genes

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