Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_24892 Sequoiadendron giganteum HOM05D001448 ORTHO05D005781 1.3e-108 396.4 200 100.0
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 1.0e-31 141.0 136 53.7
Nn1g02698 Nelumbo nucifera HOM05D001448 ORTHO05D005781 1.7e-31 140.2 136 54.4
SalBow4G1626 Salvia bowleyana HOM05D001448 ORTHO05D005781 3.0e-31 139.4 136 53.7
Actinidia09565 Actinidia chinensis HOM05D001448 ORTHO05D005781 5.0e-31 138.7 136 51.5
ClCG07G000910 Citrullus lanatus HOM05D001448 ORTHO05D005781 6.6e-31 138.3 136 55.1
Sed0017037 Sechium edule HOM05D001448 ORTHO05D005781 6.6e-31 138.3 133 54.1
SEGI_22534 Sequoiadendron giganteum HOM05D001448 ORTHO05D005781 6.6e-31 138.3 145 49.7
Haze_24590 Corylus avellana HOM05D001448 ORTHO05D005781 1.1e-30 137.5 128 55.5
Haze_24594 Corylus avellana HOM05D001448 ORTHO05D005781 1.1e-30 137.5 128 55.5
CANSAT01G0590 Cannabis sativa HOM05D001448 ORTHO05D005781 1.5e-30 137.1 141 51.8
QL09p037774 Quercus lobata HOM05D001448 ORTHO05D005781 1.9e-30 136.7 143 51.7
SalBow4G1745 Salvia bowleyana HOM05D001448 ORTHO05D005781 1.9e-30 136.7 136 52.9
Prupe.8G227600 Prunus persica HOM05D001448 ORTHO05D005781 3.3e-30 136.0 134 55.2
SGA_v2.0_scaffold138G35260 Striga asiatica HOM05D001448 ORTHO05D005781 4.3e-30 135.6 136 51.5
Cfa002395 Carpinus fangiana HOM05D001448 ORTHO05D005781 5.6e-30 135.2 133 54.9
Rhsim01G0266300 Rhododendron simsii HOM05D001448 ORTHO05D005781 5.6e-30 135.2 136 49.3
Aqoxy5G00274 Aquilegia oxysepala HOM05D001448 ORTHO05D005781 1.6e-29 133.7 133 51.1
CsaV3_3G022600 Cucumis sativus L. HOM05D001448 ORTHO05D005781 2.1e-29 133.3 133 54.9
PGR044G0051 Punica granatum HOM05D001448 ORTHO05D005781 2.1e-29 133.3 136 48.5
Duzib138G0307 Durio zibethinus HOM05D001448 ORTHO05D005781 2.8e-29 132.9 131 50.4
Migut.D00407 Erythranthe guttata HOM05D001448 ORTHO05D005781 2.8e-29 132.9 143 47.6
MD10G1187800 Malus domestica HOM05D001448 ORTHO05D005781 2.8e-29 132.9 144 49.3
Nitab4.5_0000086g0180 Nicotiana tabacum HOM05D001448 ORTHO05D005781 3.6e-29 132.5 140 50.7
MBI18_g10480_MAGBIO Magnolia biondii HOM05D001448 ORTHO05D005781 4.7e-29 132.1 127 51.2
Nitab4.5_0004192g0040 Nicotiana tabacum HOM05D001448 ORTHO05D005781 4.7e-29 132.1 140 51.4
GSVIVG01028296001 Vitis vinifera HOM05D001448 ORTHO05D005781 6.2e-29 131.7 131 50.4
CDE09G1103 Ceratophyllum demersum HOM05D001448 ORTHO05D005781 8.0e-29 131.3 130 50.0
Peaxi162Scf00134g00123 Petunia axillaris HOM05D001448 ORTHO05D005781 1.1e-28 131.0 138 50.0
Manes.05G087700 Manihot esculenta HOM05D001448 ORTHO05D005781 1.4e-28 130.6 133 50.4
RcHm_v2.0_Chr6g0288861 Rosa chinensis HOM05D001448 ORTHO05D005781 1.8e-28 130.2 135 49.6
Sabra02G0032900 Salix brachista HOM05D001448 ORTHO05D005781 1.8e-28 130.2 139 50.4
THA.LOC104800882 Tarenaya hassleriana HOM05D001448 ORTHO05D005781 1.8e-28 130.2 131 48.9
COL.COLO4_05599 Corchorus olitorius HOM05D001448 ORTHO05D005781 3.1e-28 129.4 131 48.1
PSO063G1607 Papaver somniferum HOM05D001448 ORTHO05D005781 3.1e-28 129.4 133 50.4
ClCG07G000900 Citrullus lanatus HOM05D001448 ORTHO05D005781 4.0e-28 129.0 136 51.5
Dinv22438 Davidia involucrata HOM05D001448 ORTHO05D005781 4.0e-28 129.0 136 48.5
MD05G1201000 Malus domestica HOM05D001448 ORTHO05D005781 4.0e-28 129.0 142 49.3
CSS0017569 Camellia sinensis var. sinensis HOM05D001448 ORTHO05D005781 6.8e-28 128.3 136 47.1
CSS0028913 Camellia sinensis var. sinensis HOM05D001448 ORTHO05D005781 6.8e-28 128.3 136 47.1
TWI18G1083 Tripterygium wilfordii HOM05D001448 ORTHO05D005781 6.8e-28 128.3 128 48.4
ATR0680G113 Amborella trichopoda HOM05D001448 ORTHO05D005781 8.9e-28 127.9 133 51.9
DCAR_018467 Daucus carota HOM05D001448 ORTHO05D005781 1.2e-27 127.5 129 49.6
FAN27G1373 Fragaria x ananassa HOM05D001448 ORTHO05D005781 1.2e-27 127.5 130 49.2
Thecc.01G262000 Theobroma cacao HOM05D001448 ORTHO05D005781 1.2e-27 127.5 136 48.5
Potri.002G041300 Populus trichocarpa HOM05D001448 ORTHO05D005781 1.5e-27 127.1 138 47.8
Cc01_g18530 Coffea canephora HOM05D001448 ORTHO05D005781 2.0e-27 126.7 133 48.9
Lj1g0021166 Lotus japonicus HOM05D001448 ORTHO05D005781 2.0e-27 126.7 137 47.4
Cpa.g.sc50.45 Carica papaya HOM05D001448 ORTHO05D005781 2.6e-27 126.3 131 48.1
FvH4_2g21980 Fragaria vesca HOM05D001448 ORTHO05D005781 2.6e-27 126.3 135 49.6
FAN24G2205 Fragaria x ananassa HOM05D001448 ORTHO05D005781 2.6e-27 126.3 130 50.0
Gohir.A11G129066 Gossypium hirsutum HOM05D001448 ORTHO05D005781 2.6e-27 126.3 135 48.9
FAN15G0786 Fragaria x ananassa HOM05D001448 ORTHO05D005781 3.4e-27 125.9 135 49.6
Gohir.D11G134900 Gossypium hirsutum HOM05D001448 ORTHO05D005781 3.4e-27 125.9 135 48.1
Lj2C1155G3 Lonicera japonica HOM05D001448 ORTHO05D005781 3.4e-27 125.9 132 50.0
FAN20G0519 Fragaria x ananassa HOM05D001448 ORTHO05D005781 4.4e-27 125.6 130 49.2
HanXRQChr10g0281131 Helianthus annuus HOM05D001448 ORTHO05D005781 4.4e-27 125.6 128 46.1
Gorai.007G144300 Gossypium raimondii HOM05D001448 ORTHO05D005781 5.8e-27 125.2 135 48.9
TWI18G1036 Tripterygium wilfordii HOM05D001448 ORTHO05D005781 5.8e-27 125.2 128 49.2
Ciclev10018683m.g Citrus clementina HOM05D001448 ORTHO05D005781 7.5e-27 124.8 131 45.0
PSO017G5465 Papaver somniferum HOM05D001448 ORTHO05D005781 9.8e-27 124.4 133 47.4
Atru.chr5.1640 Acer truncatum HOM05D001448 ORTHO05D005781 1.3e-26 124.0 136 47.1
CAN.G461.11 Capsicum annuum HOM05D001448 ORTHO05D005781 1.3e-26 124.0 169 42.0
AL4G26550 Arabidopsis lyrata HOM05D001448 ORTHO05D005781 1.7e-26 123.6 128 45.3
Glyma.03G161300 Glycine max HOM05D001448 ORTHO05D005781 1.7e-26 123.6 138 47.1
VMungo1383G0732 Vigna mungo HOM05D001448 ORTHO05D005781 1.7e-26 123.6 138 45.7
BcaB02g10384 Brassica carinata HOM05D001448 ORTHO05D005781 2.2e-26 123.2 131 46.6
Phvul.001G159200 Phaseolus vulgaris HOM05D001448 ORTHO05D005781 2.2e-26 123.2 133 45.1
Pp3c8_13220 Physcomitrium patens HOM05D001448 ORTHO05D005781 2.9e-26 122.9 150 43.3
A05p14280 Brassica napus HOM05D001448 ORTHO05D005781 3.7e-26 122.5 141 44.7
Sc24g0003080 Simmondsia chinensis HOM05D001448 ORTHO05D005781 3.7e-26 122.5 130 46.9
HPP92_025971 Vanilla planifolia HOM05D001448 ORTHO05D005781 3.7e-26 122.5 127 47.2
Lalb_Chr01g0019731 Lupinus albus HOM05D001448 ORTHO05D005781 4.9e-26 122.1 144 43.1
Hund09588 Selenicereus undatus HOM05D001448 ORTHO05D005781 4.9e-26 122.1 133 46.6
Os07g0413700 Oryza sativa ssp. japonica HOM05D001448 ORTHO05D005781 6.4e-26 121.7 128 50.0
vmacro14854 Vaccinium macrocarpon HOM05D001448 ORTHO05D005781 8.3e-26 121.3 136 45.6
BcaC02g11226 Brassica carinata HOM05D001448 ORTHO05D005781 1.1e-25 120.9 140 44.3
C04p19030 Brassica napus HOM05D001448 ORTHO05D005781 1.1e-25 120.9 140 44.3
BolC4t23436H Brassica oleracea HOM05D001448 ORTHO05D005781 1.1e-25 120.9 140 44.3
Eucgr.K03285 Eucalyptus grandis HOM05D001448 ORTHO05D005781 1.1e-25 120.9 129 44.2
Lsat_1_v5_gn_9_8981 Lactuca sativa HOM05D001448 ORTHO05D005781 2.4e-25 119.8 131 47.3
Medtr7g096520 Medicago truncatula HOM05D001448 ORTHO05D005781 2.4e-25 119.8 140 45.7
ECA247G2778 Erigeron canadensis HOM05D001448 ORTHO05D005781 3.2e-25 119.4 128 46.9
Ah.02g111820 Amaranthus hybridus HOM05D001448 ORTHO05D005781 4.1e-25 119.0 133 45.9
CBR_g1120 Chara braunii HOM05D001448 ORTHO05D005781 4.1e-25 119.0 145 44.8
TPR.G16288 Trifolium pratense HOM05D001448 ORTHO05D005781 4.1e-25 119.0 135 45.9
Carub.0004s1263 Capsella rubella HOM05D001448 ORTHO05D005781 1.2e-24 117.5 134 44.8
Thhalv10016190m.g Eutrema salsugineum HOM05D001448 ORTHO05D005781 2.0e-24 116.7 128 44.5
Pp3c8_17220 Physcomitrium patens HOM05D001448 ORTHO05D005781 2.7e-24 116.3 150 44.0
arahy.Tifrunner.gnm1.ann1.BU3W1C Arachis hypogaea HOM05D001448 ORTHO05D005781 3.5e-24 115.9 128 42.2
Ca_08659_v3 Cicer arietinum L. HOM05D001448 ORTHO05D005781 3.5e-24 115.9 147 42.2
Zm00001eb094840 Zea mays HOM05D001448 ORTHO05D005781 4.6e-24 115.5 132 45.5
arahy.Tifrunner.gnm1.ann1.84CV5L Arachis hypogaea HOM05D001448 ORTHO05D005781 7.8e-24 114.8 130 42.3
CARHR124940 Cardamine hirsuta HOM05D001448 ORTHO05D005781 7.8e-24 114.8 137 41.6
AT2G31320 Arabidopsis thaliana HOM05D001448 ORTHO05D005781 1.0e-23 114.4 132 42.4
Mapoly0030s0138 Marchantia polymorpha HOM05D001448 ORTHO05D005781 1.0e-23 114.4 133 45.9
BraA05t20358Z Brassica rapa HOM05D001448 ORTHO05D005781 2.3e-23 113.2 154 40.9
Duzib211G0273 Durio zibethinus HOM05D001448 ORTHO05D005781 3.9e-23 112.5 131 45.0
Peaxi162Scf00751g00223 Petunia axillaris HOM05D001448 ORTHO05D005781 3.9e-23 112.5 145 44.1
Mapoly0154s0015 Marchantia polymorpha HOM05D001448 ORTHO05D005781 5.0e-23 112.1 139 44.6
EL10Ac5g10426 Beta vulgaris HOM05D001448 ORTHO05D005781 6.6e-23 111.7 128 43.8
Sc24g0002470 Simmondsia chinensis HOM05D001448 ORTHO05D005781 5.6e-22 108.6 132 42.4
MBI18_g10474_MAGBIO Magnolia biondii HOM05D001448 ORTHO05D005781 7.3e-22 108.2 133 41.4
Dinv03004 Davidia involucrata HOM05D001448 ORTHO05D005781 1.6e-21 107.1 133 42.9
PSO782G0756 Papaver somniferum HOM05D001448 ORTHO05D005781 1.6e-21 107.1 144 39.6
Psat3g059080 Pisum sativum HOM05D001448 ORTHO05D005781 1.6e-21 107.1 153 37.3
Aa31LG5G5640 Aethionema arabicum HOM05D001448 ORTHO05D005781 2.1e-21 106.7 141 41.8
Lj2g0018286 Lotus japonicus HOM05D001448 ORTHO05D005781 2.1e-21 106.7 133 39.8
SMO118G0342 Selaginella moellendorffii HOM05D001448 ORTHO05D005781 6.2e-21 105.1 141 39.0
Sp4g13800 Schrenkiella parvula HOM05D001448 ORTHO05D005781 8.1e-21 104.8 128 39.8
MELO3C024039.2 Cucumis melo HOM05D001448 ORTHO05D005781 2.3e-20 103.2 154 41.6
Actinidia21190 Actinidia chinensis HOM05D001448 ORTHO05D005781 3.4e-19 99.4 161 36.0
AUR62011902 Chenopodium quinoa HOM05D001448 ORTHO05D005781 7.5e-19 98.2 95 45.3
Thecc.01G262500 Theobroma cacao HOM05D001448 ORTHO05D005781 6.4e-18 95.1 87 47.1
COL.COLO4_05598 Corchorus olitorius HOM05D001448 ORTHO05D005781 1.1e-17 94.4 131 41.2
Peaxi162Scf00751g00224 Petunia axillaris HOM05D001448 ORTHO05D005781 4.4e-11 72.4 88 43.2
PSO478G3490 Papaver somniferum HOM05D005043 ORTHO05D006182 7.6e-11 71.6 140 33.6
BolC5t33915H Brassica oleracea HOM05D005043 ORTHO05D006182 1.7e-10 70.5 146 31.5
A03p39040 Brassica napus HOM05D005043 ORTHO05D006182 2.9e-10 69.7 153 30.7
PSO782G2110 Papaver somniferum HOM05D005043 ORTHO05D006182 2.9e-10 69.7 139 33.1
Carub.0003s1455 Capsella rubella HOM05D005043 ORTHO05D006182 6.4e-10 68.6 163 32.5
C03p47310 Brassica napus HOM05D005043 ORTHO05D006182 1.4e-09 67.4 146 30.1
Sopen03g036870 Solanum pennellii HOM05D001448 ORTHO05D005781 1.9e-09 67.0 85 40.0
SHI09861 Sapria himalayana HOM05D001448 ORTHO05D005781 2.4e-09 66.6 88 39.8
Glyma.19G162800 Glycine max HOM05D001448 ORTHO05D005781 7.1e-09 65.1 95 38.9
Sp3g13100 Schrenkiella parvula HOM05D005043 ORTHO05D006182 7.1e-09 65.1 145 30.3
AL3G27210 Arabidopsis lyrata HOM05D005043 ORTHO05D006182 1.2e-08 64.3 141 31.9
CiPaw.11G160200 Carya illinoinensis HOM05D005043 ORTHO05D006182 1.2e-08 64.3 129 34.1
unitig_8.g3886 Utricularia gibba HOM05D001448 ORTHO05D005781 1.2e-08 64.3 44 65.9
THA.LOC104822566 Tarenaya hassleriana HOM05D005043 ORTHO05D006182 1.6e-08 63.9 145 28.3
AT3G14890 Arabidopsis thaliana HOM05D005043 ORTHO05D006182 2.7e-08 63.2 145 30.3
PSO384G1010 Papaver somniferum HOM05D005043 ORTHO05D006182 3.5e-08 62.8 130 31.5
BcaNung07105 Brassica carinata HOM05D005043 ORTHO05D006182 4.6e-08 62.4 148 33.1
BolC3t17001H Brassica oleracea HOM05D005043 ORTHO05D006182 4.6e-08 62.4 148 33.1
Aqoxy7G03872 Aquilegia oxysepala HOM05D005043 ORTHO05D006182 7.8e-08 61.6 160 27.5
A05p34520 Brassica napus HOM05D005043 ORTHO05D006182 7.8e-08 61.6 168 30.4
BraA05t22272Z Brassica rapa HOM05D005043 ORTHO05D006182 7.8e-08 61.6 168 30.4
Actinidia14175 Actinidia chinensis HOM05D001448 ORTHO05D038118 1.0e-07 61.2 52 55.8
EL10Ac4g08345 Beta vulgaris HOM05D005043 ORTHO05D006182 1.3e-07 60.8 110 34.5
MD11G1263900 Malus domestica HOM05D005043 ORTHO05D006182 1.3e-07 60.8 94 36.2
FAN16G3394 Fragaria x ananassa HOM05D005043 ORTHO05D006182 3.0e-07 59.7 165 30.3
Lsat_1_v5_gn_9_99860 Lactuca sativa HOM05D005043 ORTHO05D006182 3.0e-07 59.7 102 35.3
BcaB06g29516 Brassica carinata HOM05D005043 ORTHO05D006182 3.9e-07 59.3 168 28.0
C05p52260 Brassica napus HOM05D005043 ORTHO05D006182 3.9e-07 59.3 168 28.0
Dinv18365 Davidia involucrata HOM05D005043 ORTHO05D006182 3.9e-07 59.3 109 33.0
Nitab4.5_0006953g0040 Nicotiana tabacum HOM05D005043 ORTHO05D006182 3.9e-07 59.3 130 33.8
Zm00001eb153930 Zea mays HOM05D005043 ORTHO05D006182 3.9e-07 59.3 139 31.7
FAN25G1853 Fragaria x ananassa HOM05D005043 ORTHO05D006182 5.1e-07 58.9 156 28.8
Prupe.5G191000 Prunus persica HOM05D001448 ORTHO05D005781 5.1e-07 58.9 51 47.1
AUR62024743 Chenopodium quinoa HOM05D001448 ORTHO05D005781 6.6e-07 58.5 44 54.5
FAN11G3478 Fragaria x ananassa HOM05D005043 ORTHO05D006182 6.6e-07 58.5 165 29.7
FAN21G3659 Fragaria x ananassa HOM05D005043 ORTHO05D006182 6.6e-07 58.5 156 28.2
Rhsim06G0208200 Rhododendron simsii HOM05D005043 ORTHO05D006182 6.6e-07 58.5 129 31.8
Aa31LG8G2100 Aethionema arabicum HOM05D005043 ORTHO05D006182 8.7e-07 58.2 105 37.1
PSO478G1721 Papaver somniferum HOM05D005043 ORTHO05D006182 8.7e-07 58.2 157 30.6
Hma1.2p1_0290F.1_g114850 Hydrangea macrophylla HOM05D005043 ORTHO05D006182 1.1e-06 57.8 111 35.1
HanXRQChr12g0362951 Helianthus annuus HOM05D005043 ORTHO05D006182 1.5e-06 57.4 153 31.4
RcHm_v2.0_Chr5g0030891 Rosa chinensis HOM05D005043 ORTHO05D006182 1.5e-06 57.4 161 29.2
AUR62019576 Chenopodium quinoa HOM05D005043 ORTHO05D006182 1.9e-06 57.0 85 32.9
ECA240G3232 Erigeron canadensis HOM05D005043 ORTHO05D006182 1.9e-06 57.0 151 30.5
QL08p026221 Quercus lobata HOM05D005043 ORTHO05D006182 1.9e-06 57.0 116 38.8
RcHm_v2.0_Chr5g0030901 Rosa chinensis HOM05D005043 ORTHO05D006182 1.9e-06 57.0 157 27.4
Thhalv10020510m.g Eutrema salsugineum HOM05D005043 ORTHO05D006182 2.5e-06 56.6 107 29.9
GSVIVG01014196001 Vitis vinifera HOM05D005043 ORTHO05D006182 2.5e-06 56.6 103 36.9
Prupe.4G164600 Prunus persica HOM05D005043 ORTHO05D006182 3.3e-06 56.2 92 35.9
Potri.001G390500 Populus trichocarpa HOM05D005043 ORTHO05D006182 4.3e-06 55.8 123 32.5
Atru.chr2.2132 Acer truncatum HOM05D005043 ORTHO05D006182 5.6e-06 55.5 96 35.4
BcaB06g25330 Brassica carinata HOM05D005043 ORTHO05D006182 5.6e-06 55.5 86 37.2
AUR62042782 Chenopodium quinoa HOM05D005043 ORTHO05D006182 5.6e-06 55.5 80 35.0
FvH4_3g18270 Fragaria vesca HOM05D005043 ORTHO05D006182 5.6e-06 55.5 170 27.1
PSO782G5034 Papaver somniferum HOM05D005043 ORTHO05D006182 5.6e-06 55.5 176 27.8
Hund10554 Selenicereus undatus HOM05D005043 ORTHO05D006182 5.6e-06 55.5 78 35.9
HanXRQChr13g0390281 Helianthus annuus HOM05D005043 ORTHO05D006182 7.3e-06 55.1 96 36.5


User provided reference genes

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