Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_23908 Sequoiadendron giganteum HOM05D003829 ORTHO05D004052 1.7e-146 522.7 268 100.0
SEGI_36904 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 6.1e-48 195.3 214 57.0
SEGI_10599 Sequoiadendron giganteum HOM05D003829 ORTHO05D004943 3.3e-46 189.5 213 55.9
CDE10G0816 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 3.9e-39 166.0 238 47.5
CDE10G0520 Ceratophyllum demersum HOM05D003829 ORTHO05D004943 2.6e-38 163.3 220 48.2
Cpa.g.sc271.5 Carica papaya HOM05D003829 ORTHO05D004943 5.7e-38 162.2 221 48.0
ATR0789G018 Amborella trichopoda HOM05D003829 ORTHO05D004943 1.7e-37 160.6 238 44.1
SEGI_12898 Sequoiadendron giganteum HOM05D009907 ORTHO05D004052 2.8e-37 159.8 91 84.6
SMO351G0192 Selaginella moellendorffii HOM05D003829 ORTHO05D004943 2.4e-36 156.8 213 46.9
Pp3c19_13120 Physcomitrium patens HOM05D003829 ORTHO05D004943 3.1e-36 156.4 236 44.9
Pp3c22_15340 Physcomitrium patens HOM05D003829 ORTHO05D004943 5.3e-36 155.6 215 45.6
SEGI_10389 Sequoiadendron giganteum HOM05D009907 ORTHO05D000062 1.2e-35 154.5 92 85.9
SEGI_15463 Sequoiadendron giganteum HOM05D009907 ORTHO05D004052 1.2e-35 154.5 93 83.9
SEGI_37814 Sequoiadendron giganteum HOM05D003404 ORTHO05D004052 2.0e-35 153.7 119 68.9
SEGI_24287 Sequoiadendron giganteum HOM05D009907 ORTHO05D004052 4.5e-35 152.5 91 81.3
Duzib084G0834 Durio zibethinus HOM05D003829 ORTHO05D004943 1.7e-34 150.6 225 44.9
Mapoly0013s0023 Marchantia polymorpha HOM05D003829 ORTHO05D004943 1.7e-34 150.6 217 44.7
SEGI_36214 Sequoiadendron giganteum HOM05D009907 ORTHO05D004052 1.7e-34 150.6 91 80.2
Os05g0558900 Oryza sativa ssp. japonica HOM05D003829 ORTHO05D004943 2.9e-34 149.8 215 44.2
SEGI_12403 Sequoiadendron giganteum HOM05D009907 ORTHO05D000853 3.8e-34 149.4 87 82.8
Nn6g34733 Nelumbo nucifera HOM05D003829 ORTHO05D004943 5.0e-34 149.1 226 44.7
THA.LOC104806554 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 5.0e-34 149.1 248 41.5
AL2G32240 Arabidopsis lyrata HOM05D003829 ORTHO05D004943 6.5e-34 148.7 248 43.1
Gorai.008G291100 Gossypium raimondii HOM05D003829 ORTHO05D004943 6.5e-34 148.7 225 44.0
THA.LOC104820955 Tarenaya hassleriana HOM05D003829 ORTHO05D004943 8.5e-34 148.3 248 41.5
Thecc.03G060100 Theobroma cacao HOM05D003829 ORTHO05D004943 8.5e-34 148.3 225 44.0
TAR622G1091 Trochodendron aralioides HOM05D003829 ORTHO05D004943 8.5e-34 148.3 242 43.0
Zm00001eb267900 Zea mays HOM05D003829 ORTHO05D004943 8.5e-34 148.3 216 44.4
Eucgr.B02012 Eucalyptus grandis HOM05D003829 ORTHO05D004943 1.1e-33 147.9 227 44.5
Gohir.D12G270700 Gossypium hirsutum HOM05D003829 ORTHO05D004943 1.1e-33 147.9 225 44.0
Lj4C813G7 Lonicera japonica HOM05D003829 ORTHO05D004943 1.1e-33 147.9 227 44.5
SEGI_06874 Sequoiadendron giganteum HOM05D009907 ORTHO05D004052 1.1e-33 147.9 91 80.2
Sed0025371 Sechium edule HOM05D003829 ORTHO05D004943 1.9e-33 147.1 247 42.9
RcHm_v2.0_Chr7g0184111 Rosa chinensis HOM05D003829 ORTHO05D004943 4.2e-33 146.0 229 43.7
AagrBONN_evm.TU.Sc2ySwM_199.43 Anthoceros agrestis HOM05D003829 ORTHO05D004943 7.2e-33 145.2 215 43.7
FAN08G2534 Fragaria x ananassa HOM05D003829 ORTHO05D004943 7.2e-33 145.2 226 42.0
FAN13G0156 Fragaria x ananassa HOM05D003829 ORTHO05D004943 7.2e-33 145.2 226 42.0
Sp6g28120 Schrenkiella parvula HOM05D003829 ORTHO05D004943 9.4e-33 144.8 248 43.1
EL10Ac6g14132 Beta vulgaris HOM05D003829 ORTHO05D004943 1.6e-32 144.1 222 44.1
MSTRG.22458 Avicennia marina HOM05D003829 ORTHO05D004943 2.1e-32 143.7 240 42.5
FvH4_5g13020 Fragaria vesca HOM05D003829 ORTHO05D004943 2.1e-32 143.7 226 41.6
FAN18G1085 Fragaria x ananassa HOM05D003829 ORTHO05D004943 2.1e-32 143.7 226 41.6
Nn3g17616 Nelumbo nucifera HOM05D003829 ORTHO05D004943 2.1e-32 143.7 226 44.2
PGR119G2172 Punica granatum HOM05D003829 ORTHO05D004943 2.1e-32 143.7 231 42.0
Actinidia18960 Actinidia chinensis HOM05D003829 ORTHO05D004943 2.7e-32 143.3 225 42.2
CAN.G282.43 Capsicum annuum HOM05D003829 ORTHO05D004943 2.7e-32 143.3 240 43.3
AUR62008644 Chenopodium quinoa HOM05D003829 ORTHO05D004943 2.7e-32 143.3 224 43.8
Gohir.A12G270300 Gossypium hirsutum HOM05D003829 ORTHO05D004943 2.7e-32 143.3 225 43.6
Actinidia35063 Actinidia chinensis HOM05D003829 ORTHO05D004943 3.6e-32 142.9 227 43.6
Ah.03g138770 Amaranthus hybridus HOM05D003829 ORTHO05D004943 3.6e-32 142.9 227 42.3
AUR62014243 Chenopodium quinoa HOM05D003829 ORTHO05D004943 3.6e-32 142.9 227 43.2
PSO676G0009 Papaver somniferum HOM05D003829 ORTHO05D004943 3.6e-32 142.9 214 43.5
Atru.chr10.875 Acer truncatum HOM05D003829 ORTHO05D004943 4.7e-32 142.5 227 42.3
CSS0022273 Camellia sinensis var. sinensis HOM05D003829 ORTHO05D004943 6.1e-32 142.1 227 41.9
Peaxi162Scf00153g00217 Petunia axillaris HOM05D003829 ORTHO05D004943 6.1e-32 142.1 238 43.3
BcaB08g36877 Brassica carinata HOM05D003829 ORTHO05D004943 8.0e-32 141.7 248 42.7
BolC9t58950H Brassica oleracea HOM05D003829 ORTHO05D004943 8.0e-32 141.7 248 42.7
CANSAT80G2907 Cannabis sativa HOM05D003829 ORTHO05D004943 8.0e-32 141.7 227 43.6
CARHR065490 Cardamine hirsuta HOM05D003829 ORTHO05D004943 8.0e-32 141.7 249 41.4
Lsat_1_v5_gn_1_11920 Lactuca sativa HOM05D003829 ORTHO05D004943 8.0e-32 141.7 227 42.7
GSVIVG01008188001 Vitis vinifera HOM05D003829 ORTHO05D004943 8.0e-32 141.7 227 42.7
A10p23060 Brassica napus HOM05D003829 ORTHO05D004943 1.0e-31 141.4 248 42.3
C09p61050 Brassica napus HOM05D003829 ORTHO05D004943 1.0e-31 141.4 248 42.3
BraA10t44375Z Brassica rapa HOM05D003829 ORTHO05D004943 1.0e-31 141.4 248 42.3
Nitab4.5_0006274g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.0e-31 141.4 219 43.4
PSO384G2719 Papaver somniferum HOM05D003829 ORTHO05D004943 1.0e-31 141.4 214 43.5
Potri.018G070200 Populus trichocarpa HOM05D003829 ORTHO05D004943 1.0e-31 141.4 225 42.2
Sc12g0007010 Simmondsia chinensis HOM05D003829 ORTHO05D004943 1.0e-31 141.4 218 42.7
TWI73G0611 Tripterygium wilfordii HOM05D003829 ORTHO05D004943 1.0e-31 141.4 225 43.6
Aa31LG11G13610 Aethionema arabicum HOM05D003829 ORTHO05D004943 1.4e-31 141.0 260 41.2
Solyc01g008310.4 Solanum lycopersicum HOM05D003829 ORTHO05D004943 1.4e-31 141.0 240 42.5
Sopen01g003830 Solanum pennellii HOM05D003829 ORTHO05D004943 1.4e-31 141.0 240 42.5
AT1G72550 Arabidopsis thaliana HOM05D003829 ORTHO05D004943 1.8e-31 140.6 238 43.3
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 3.0e-31 139.8 219 42.9
HanXRQChr03g0078721 Helianthus annuus HOM05D003829 ORTHO05D004943 3.0e-31 139.8 219 43.4
HanXRQChr09g0270121 Helianthus annuus HOM05D003829 ORTHO05D004943 4.0e-31 139.4 219 43.4
Carub.0002s1941 Capsella rubella HOM05D003829 ORTHO05D004943 6.8e-31 138.7 248 42.3
PSO339G3234 Papaver somniferum HOM05D003829 ORTHO05D004943 6.8e-31 138.7 214 43.9
vmacro21052 Vaccinium macrocarpon HOM05D003829 ORTHO05D004943 6.8e-31 138.7 213 43.2
Cc00_g04570 Coffea canephora HOM05D003829 ORTHO05D004943 8.8e-31 138.3 217 44.7
Glyma.17G083700 Glycine max HOM05D003829 ORTHO05D004943 1.2e-30 137.9 89 77.5
Ciclev10014690m.g Citrus clementina HOM05D003829 ORTHO05D004943 2.0e-30 137.1 227 40.5
VMungo1215G2863 Vigna mungo HOM05D003829 ORTHO05D004943 2.0e-30 137.1 89 76.4
Glyma.05G016400 Glycine max HOM05D003829 ORTHO05D004943 2.6e-30 136.7 89 76.4
TPR.G23867 Trifolium pratense HOM05D003829 ORTHO05D004943 2.6e-30 136.7 89 76.4
COL.COLO4_28877 Corchorus olitorius HOM05D003829 ORTHO05D004943 3.4e-30 136.3 85 78.8
Phvul.003G180700 Phaseolus vulgaris HOM05D003829 ORTHO05D004943 3.4e-30 136.3 89 76.4
CiPaw.16G081500 Carya illinoinensis HOM05D003829 ORTHO05D004943 4.4e-30 136.0 83 81.9
Migut.L00155 Erythranthe guttata HOM05D003829 ORTHO05D004943 4.4e-30 136.0 106 69.8
Migut.N03353 Erythranthe guttata HOM05D003829 ORTHO05D004943 4.4e-30 136.0 106 69.8
Medtr4g112680 Medicago truncatula HOM05D003829 ORTHO05D004943 4.4e-30 136.0 89 76.4
Psat4g043920 Pisum sativum HOM05D003829 ORTHO05D004943 4.4e-30 136.0 89 75.3
arahy.Tifrunner.gnm1.ann1.03AHKF Arachis hypogaea HOM05D003829 ORTHO05D004943 5.7e-30 135.6 89 76.4
arahy.Tifrunner.gnm1.ann1.WM1R7K Arachis hypogaea HOM05D003829 ORTHO05D004943 5.7e-30 135.6 89 76.4
CiPaw.04G139300 Carya illinoinensis HOM05D003829 ORTHO05D004943 5.7e-30 135.6 85 78.8
Ca_21737_v3 Cicer arietinum L. HOM05D003829 ORTHO05D004943 7.5e-30 135.2 106 66.0
Potri.013G068100 Populus trichocarpa HOM05D003829 ORTHO05D004943 7.5e-30 135.2 225 41.8
SGA_v2.0_scaffold116G32207 Striga asiatica HOM05D003829 ORTHO05D004943 9.7e-30 134.8 89 75.3
CBR_g49053 Chara braunii HOM05D003829 ORTHO05D004943 1.3e-29 134.4 246 39.4
Dinv38617 Davidia involucrata HOM05D003829 ORTHO05D004943 1.3e-29 134.4 217 42.9
Hma1.2p1_0744F.1_g211650 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.3e-29 134.4 217 42.9
MD14G1218400 Malus domestica HOM05D003829 ORTHO05D004943 1.3e-29 134.4 85 77.6
QL10p021913 Quercus lobata HOM05D003829 ORTHO05D004943 1.3e-29 134.4 83 79.5
ClCG06G015260 Citrullus lanatus HOM05D003829 ORTHO05D004943 1.7e-29 134.0 247 39.7
Migut.M00517 Erythranthe guttata HOM05D003829 ORTHO05D004943 1.7e-29 134.0 105 69.5
Nitab4.5_0023629g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 1.7e-29 134.0 85 77.6
Prupe.5G041000 Prunus persica HOM05D003829 ORTHO05D004943 1.7e-29 134.0 85 75.3
COL.COLO4_30269 Corchorus olitorius HOM05D003829 ORTHO05D004943 2.2e-29 133.7 85 76.5
Migut.O00831 Erythranthe guttata HOM05D003829 ORTHO05D004943 2.2e-29 133.7 106 68.9
SGA_v2.0_scaffold127G34045 Striga asiatica HOM05D003829 ORTHO05D004943 2.2e-29 133.7 105 69.5
Thhalv10007156m.g Eutrema salsugineum HOM05D003829 ORTHO05D004943 2.8e-29 133.3 106 66.0
Cfa021591 Carpinus fangiana HOM05D003829 ORTHO05D004943 3.7e-29 132.9 85 76.5
MD06G1208000 Malus domestica HOM05D003829 ORTHO05D004943 3.7e-29 132.9 85 75.3
MCO09G827 Micromonas commoda HOM05D003829 ORTHO05D004943 3.7e-29 132.9 226 41.6
Lalb_Chr12g0197451 Lupinus albus HOM05D003829 ORTHO05D004943 4.8e-29 132.5 83 79.5
BcaC04g18917 Brassica carinata HOM05D003829 ORTHO05D004943 6.3e-29 132.1 106 67.9
HPP92_013144 Vanilla planifolia HOM05D003829 ORTHO05D004943 6.3e-29 132.1 85 76.5
HPP92_013145 Vanilla planifolia HOM05D003829 ORTHO05D004943 6.3e-29 132.1 85 76.5
Aqoxy1G02793 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 8.3e-29 131.7 106 67.0
Nitab4.5_0021995g0010 Nicotiana tabacum HOM05D003829 ORTHO05D004943 8.3e-29 131.7 94 72.3
Aqoxy6G02137 Aquilegia oxysepala HOM05D003829 ORTHO05D004943 1.4e-28 131.0 106 67.0
CiPaw.15G121900 Carya illinoinensis HOM05D003829 ORTHO05D004943 1.4e-28 131.0 83 78.3
MELO3C017266.2 Cucumis melo HOM05D003829 ORTHO05D004943 1.8e-28 130.6 247 39.7
Lj4g0017423 Lotus japonicus HOM05D003829 ORTHO05D004943 1.8e-28 130.6 89 73.0
CsaV3_1G003150 Cucumis sativus L. HOM05D003829 ORTHO05D004943 2.4e-28 130.2 247 39.7
Manes.06G055300 Manihot esculenta HOM05D003829 ORTHO05D004943 3.1e-28 129.8 86 75.6
SalBow6G2606 Salvia bowleyana HOM05D003829 ORTHO05D004943 3.1e-28 129.8 85 75.3
Hund27361 Selenicereus undatus HOM05D003829 ORTHO05D004943 5.3e-28 129.0 82 76.8
Prupe.5G212200 Prunus persica HOM05D003829 ORTHO05D004943 7.0e-28 128.6 85 72.9
Sabra13G0059400 Salix brachista HOM05D003829 ORTHO05D004943 7.0e-28 128.6 236 41.1
unitig_0.g846 Utricularia gibba HOM05D003829 ORTHO05D004943 9.1e-28 128.3 85 74.1
unitig_60.g25860 Utricularia gibba HOM05D003829 ORTHO05D004943 9.1e-28 128.3 85 75.3
Hma1.2p1_0340F.1_g130210 Hydrangea macrophylla HOM05D003829 ORTHO05D004943 1.2e-27 127.9 210 42.9
Eucgr.E02529 Eucalyptus grandis HOM05D003829 ORTHO05D004943 4.5e-27 125.9 75 82.7
QL10p029183 Quercus lobata HOM05D003829 ORTHO05D004943 4.5e-27 125.9 85 72.9
HPP92_013146 Vanilla planifolia HOM05D003829 ORTHO05D004943 2.2e-26 123.6 217 40.1
AagrBONN_evm.TU.Sc2ySwM_368.2791 Anthoceros agrestis HOM05D003829 ORTHO05D004943 8.5e-26 121.7 83 71.1
Cre13.g603900 Chlamydomonas reinhardtii HOM05D003829 ORTHO05D004943 8.5e-26 121.7 223 38.6
SEGI_37638 Sequoiadendron giganteum HOM05D009907 ORTHO05D001545 1.1e-25 121.3 98 63.3
DCAR_011621 Daucus carota HOM05D003829 ORTHO05D004943 1.9e-25 120.6 100 65.0
Oeu037756.2 Olea europaea HOM05D003829 ORTHO05D004943 4.7e-24 115.9 77 75.3
PRCOL_00001438 Prasinoderma coloniale HOM05D003829 ORTHO05D004943 2.0e-22 110.5 217 36.9
Haze_18554 Corylus avellana HOM05D003829 ORTHO05D004943 4.4e-22 109.4 73 72.6
Haze_25314 Corylus avellana HOM05D003829 ORTHO05D004943 5.7e-22 109.0 70 77.1
HPP92_012745 Vanilla planifolia HOM05D003829 ORTHO05D004943 8.3e-21 105.1 67 76.1
Cfa026018 Carpinus fangiana HOM05D003829 ORTHO05D004943 3.3e-17 93.2 87 51.7
SEGI_36038 Sequoiadendron giganteum HOM05D009907 ORTHO05D000002 2.2e-13 80.5 65 64.6
Rhsim09G0091000 Rhododendron simsii HOM05D003829 ORTHO05D004943 6.3e-13 79.0 181 35.9
Haze_26625 Corylus avellana HOM05D003829 ORTHO05D004943 8.3e-13 78.6 216 31.0
Rhsim09G0090700 Rhododendron simsii HOM05D000822 ORTHO05D002021 1.8e-12 77.4 50 76.0
SEGI_29833 Sequoiadendron giganteum HOM05D009907 ORTHO05D384949 7.8e-11 72.0 47 74.5
SEGI_35331 Sequoiadendron giganteum HOM05D000038 ORTHO05D000689 1.0e-10 71.6 102 47.1
Medtr5g077610 Medicago truncatula HOM05D003829 ORTHO05D004943 1.7e-10 70.9 177 35.6
SEGI_31747 Sequoiadendron giganteum HOM05D009907 ORTHO05D000853 2.5e-09 67.0 42 76.2
Duzib205G0197 Durio zibethinus HOM05D003829 ORTHO05D004943 5.6e-09 65.9 41 73.2
SEGI_32586 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 1.2e-08 64.7 40 77.5
Rhsim01G0138800 Rhododendron simsii HOM05D003829 ORTHO05D004943 3.1e-07 60.1 141 35.5


User provided reference genes

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