Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_22031 Sequoiadendron giganteum HOM05D007405 ORTHO05D009256 1.1e-183 647.5 680 100.0
Migut.H00884 Erythranthe guttata HOM05D007405 ORTHO05D009256 1.4e-45 188.7 166 53.6
Actinidia36037 Actinidia chinensis HOM05D007405 ORTHO05D009256 7.2e-45 186.4 176 52.8
Sabra17G0067600 Salix brachista HOM05D007405 ORTHO05D009256 1.0e-35 156.0 122 59.0
Cc07_g02870 Coffea canephora HOM05D007405 ORTHO05D009256 1.4e-35 155.6 173 43.9
PSO832G3067 Papaver somniferum HOM05D007405 ORTHO05D009256 1.4e-35 155.6 581 74.4
SGA_v2.0_scaffold115G32153 Striga asiatica HOM05D007405 ORTHO05D009256 3.0e-35 154.5 189 41.8
PSO591G0419 Papaver somniferum HOM05D007405 ORTHO05D009256 8.8e-35 152.9 173 45.1
HPP92_019727 Vanilla planifolia HOM05D007405 ORTHO05D009256 8.8e-35 152.9 174 42.5
Mapoly0061s0076 Marchantia polymorpha HOM05D007405 ORTHO05D009256 1.1e-34 152.5 177 46.9
Potri.017G075700 Populus trichocarpa HOM05D007405 ORTHO05D009256 3.3e-34 151.0 120 59.2
Rhsim10G0030900 Rhododendron simsii HOM05D007405 ORTHO05D009256 4.4e-34 150.6 183 43.7
Ah.10g031180 Amaranthus hybridus HOM05D007405 ORTHO05D009256 6.3e-33 146.7 166 45.2
CDE06G2170 Ceratophyllum demersum HOM05D007405 ORTHO05D009256 5.9e-31 140.2 175 41.7
Pp3c3_5760 Physcomitrium patens HOM05D007405 ORTHO05D009256 8.5e-30 136.3 131 51.9
Pp3c3_5764 Physcomitrium patens HOM05D007405 ORTHO05D009256 8.5e-30 136.3 131 51.9
AagrBONN_evm.TU.Sc2ySwM_117.2241 Anthoceros agrestis HOM05D007405 ORTHO05D009256 2.1e-28 131.7 102 56.9
TPR.G22753 Trifolium pratense HOM05D007405 ORTHO05D009256 3.6e-28 131.0 175 40.0
CsaV3_3G041760 Cucumis sativus L. HOM05D007405 ORTHO05D009256 1.1e-26 125.9 96 63.5
Nn1g09226 Nelumbo nucifera HOM05D007405 ORTHO05D009256 4.4e-26 124.0 143 46.2
TAR039G0001 Trochodendron aralioides HOM05D002295 ORTHO05D002789 9.7e-26 122.9 129 48.1
FAN02G3519 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.8e-24 118.6 176 38.1
CSS0008879 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 7.0e-24 116.7 101 52.5
CSS0011088 Camellia sinensis var. sinensis HOM05D007405 ORTHO05D009256 7.0e-24 116.7 101 52.5
GSVIVG01032591001 Vitis vinifera HOM05D007405 ORTHO05D009256 9.1e-24 116.3 98 54.1
Os01g0833000 Oryza sativa ssp. japonica HOM05D007405 ORTHO05D009256 1.6e-23 115.5 173 35.3
Sc11g0006880 Simmondsia chinensis HOM05D007405 ORTHO05D009256 2.0e-23 115.2 91 58.2
Aa31LG9G1630 Aethionema arabicum HOM05D000330 ORTHO05D009256 3.5e-23 114.4 98 54.1
CiPaw.04G020600 Carya illinoinensis HOM05D007405 ORTHO05D009256 3.5e-23 114.4 134 43.3
MELO3C009896.2 Cucumis melo HOM05D007405 ORTHO05D009256 3.5e-23 114.4 133 42.9
FAN05G4748 Fragaria x ananassa HOM05D007405 ORTHO05D009256 3.5e-23 114.4 176 36.9
Cfa007501 Carpinus fangiana HOM05D007405 ORTHO05D009256 4.5e-23 114.0 134 44.0
ClCG10G014780 Citrullus lanatus HOM05D007405 ORTHO05D009256 4.5e-23 114.0 133 42.1
Haze_14594 Corylus avellana HOM05D007405 ORTHO05D009256 4.5e-23 114.0 98 53.1
QL02p079911 Quercus lobata HOM05D007405 ORTHO05D009256 4.5e-23 114.0 110 49.1
ATR1127G129 Amborella trichopoda HOM05D007405 ORTHO05D009256 7.7e-23 113.2 100 51.0
Sed0003758 Sechium edule HOM05D007405 ORTHO05D009256 7.7e-23 113.2 98 52.0
AUR62030576 Chenopodium quinoa HOM05D007405 ORTHO05D009256 1.0e-22 112.8 88 59.1
MD09G1044200 Malus domestica HOM05D007405 ORTHO05D009256 1.0e-22 112.8 98 52.0
Prupe.3G273600 Prunus persica HOM05D007405 ORTHO05D009256 1.0e-22 112.8 135 41.5
Manes.17G025500 Manihot esculenta HOM05D007405 ORTHO05D009256 1.3e-22 112.5 147 40.8
CANSAT64G0564 Cannabis sativa HOM05D007405 ORTHO05D009256 2.9e-22 111.3 98 51.0
DCAR_011169 Daucus carota HOM05D007405 ORTHO05D009256 2.9e-22 111.3 134 43.3
Dinv33696 Davidia involucrata HOM05D007405 ORTHO05D009256 2.9e-22 111.3 101 52.5
PGR031G2628 Punica granatum HOM05D007405 ORTHO05D009256 2.9e-22 111.3 98 52.0
CARHR262150 Cardamine hirsuta HOM05D007405 ORTHO05D009256 3.8e-22 110.9 98 51.0
MBI08_g09795_MAGBIO Magnolia biondii HOM05D007405 ORTHO05D009256 3.8e-22 110.9 175 37.7
Nitab4.5_0002265g0130 Nicotiana tabacum HOM05D007405 ORTHO05D009256 3.8e-22 110.9 138 39.9
THA.LOC104823926 Tarenaya hassleriana HOM05D007405 ORTHO05D009256 3.8e-22 110.9 104 48.1
EL10Ac2g02615 Beta vulgaris HOM05D007405 ORTHO05D009256 6.5e-22 110.2 137 41.6
Glyma.11G256300 Glycine max HOM05D007405 ORTHO05D009256 6.5e-22 110.2 151 37.1
Glyma.18G000700 Glycine max HOM05D007405 ORTHO05D009256 6.5e-22 110.2 154 36.4
Lsat_1_v5_gn_2_90480 Lactuca sativa HOM05D007405 ORTHO05D009256 6.5e-22 110.2 157 40.8
Lj7A402T45 Lonicera japonica HOM05D007405 ORTHO05D009256 6.5e-22 110.2 98 51.0
Solyc02g087560.1 Solanum lycopersicum HOM05D007405 ORTHO05D009256 6.5e-22 110.2 101 51.5
Sopen02g032330 Solanum pennellii HOM05D007405 ORTHO05D009256 6.5e-22 110.2 101 51.5
MSTRG.19401 Avicennia marina HOM05D007405 ORTHO05D009256 8.5e-22 109.8 101 53.5
Lj6g0001930 Lotus japonicus HOM05D007405 ORTHO05D009256 8.5e-22 109.8 101 51.5
Carub.0007s3571 Capsella rubella HOM05D007405 ORTHO05D009256 2.5e-21 108.2 98 50.0
HanXRQChr14g0449381 Helianthus annuus HOM05D007405 ORTHO05D009256 2.5e-21 108.2 101 48.5
Cpa.g.sc14.54 Carica papaya HOM05D007405 ORTHO05D009256 3.2e-21 107.8 93 54.8
Ciclev10011224m.g Citrus clementina HOM05D007405 ORTHO05D009256 3.2e-21 107.8 135 39.3
Thhalv10028245m.g Eutrema salsugineum HOM05D007405 ORTHO05D009256 3.2e-21 107.8 128 41.4
Lalb_Chr23g0278451 Lupinus albus HOM05D007405 ORTHO05D009256 3.2e-21 107.8 140 37.9
Zm00001eb148940 Zea mays HOM05D007405 ORTHO05D009256 3.2e-21 107.8 173 32.9
AL7G50110 Arabidopsis lyrata HOM05D007405 ORTHO05D009256 4.2e-21 107.5 98 50.0
AT5G39980 Arabidopsis thaliana HOM05D007405 ORTHO05D009256 4.2e-21 107.5 98 50.0
Atru.chr8.2441 Acer truncatum HOM05D007405 ORTHO05D009256 5.5e-21 107.1 133 41.4
Sp7g02090 Schrenkiella parvula HOM05D007405 ORTHO05D009256 5.5e-21 107.1 98 50.0
BcaC08g44440 Brassica carinata HOM05D007405 ORTHO05D009256 7.2e-21 106.7 135 42.2
C06p18840 Brassica napus HOM05D007405 ORTHO05D009256 7.2e-21 106.7 135 42.2
BolC6t37089H Brassica oleracea HOM05D007405 ORTHO05D009256 7.2e-21 106.7 135 42.2
Oeu027767.1 Olea europaea HOM05D007405 ORTHO05D009256 9.4e-21 106.3 101 48.5
BcaB02g07958 Brassica carinata HOM05D007405 ORTHO05D009256 1.2e-20 105.9 135 39.3
VMungo1383G1541 Vigna mungo HOM05D007405 ORTHO05D009256 1.2e-20 105.9 137 40.1
AUR62018305 Chenopodium quinoa HOM05D007405 ORTHO05D009256 1.6e-20 105.5 104 46.2
PGSC0003DMG400001306 Solanum tuberosum HOM05D007405 ORTHO05D009256 1.6e-20 105.5 96 53.1
A07p20170 Brassica napus HOM05D007405 ORTHO05D009256 2.7e-20 104.8 98 49.0
CAN.G206.101 Capsicum annuum HOM05D007405 ORTHO05D009256 2.7e-20 104.8 101 49.5
BraA07t29716Z Brassica rapa HOM05D007405 ORTHO05D009256 3.6e-20 104.4 98 49.0
Gohir.A07G215301 Gossypium hirsutum HOM05D007405 ORTHO05D009256 3.6e-20 104.4 101 44.6
Gohir.D07G222200 Gossypium hirsutum HOM05D007405 ORTHO05D009256 3.6e-20 104.4 101 44.6
Gorai.001G256500 Gossypium raimondii HOM05D007405 ORTHO05D009256 3.6e-20 104.4 101 44.6
Phvul.001G268500 Phaseolus vulgaris HOM05D007405 ORTHO05D009256 4.7e-20 104.0 76 65.8
TWI56G0828 Tripterygium wilfordii HOM05D007405 ORTHO05D009256 6.1e-20 103.6 101 46.5
Peaxi162Scf00129g00512 Petunia axillaris HOM05D007405 ORTHO05D009256 8.0e-20 103.2 79 60.8
Ca_16386_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 1.0e-19 102.8 138 37.7
Ca_29700_v3 Cicer arietinum L. HOM05D007405 ORTHO05D009256 1.0e-19 102.8 138 37.7
FAN09G1987 Fragaria x ananassa HOM05D007405 ORTHO05D009256 1.4e-19 102.4 80 61.2
RcHm_v2.0_Chr2g0169431 Rosa chinensis HOM05D007405 ORTHO05D009256 1.4e-19 102.4 80 61.2
COL.COLO4_25223 Corchorus olitorius HOM05D000330 ORTHO05D000209 2.3e-19 101.7 134 39.6
Duzib147G0736 Durio zibethinus HOM05D007405 ORTHO05D009256 2.3e-19 101.7 151 35.8
FvH4_6g49520 Fragaria vesca HOM05D007405 ORTHO05D009256 8.8e-19 99.8 77 59.7
FAN14G0904 Fragaria x ananassa HOM05D007405 ORTHO05D009256 8.8e-19 99.8 77 59.7
FAN14G4765 Fragaria x ananassa HOM05D007405 ORTHO05D009256 8.8e-19 99.8 77 59.7
Medtr3g083680 Medicago truncatula HOM05D007405 ORTHO05D009256 8.8e-19 99.8 101 43.6
Thecc.04G073000 Theobroma cacao HOM05D007405 ORTHO05D009256 1.2e-18 99.4 101 42.6
Psat5g105040 Pisum sativum HOM05D007405 ORTHO05D009256 1.5e-18 99.0 101 45.5
FAN02G3321 Fragaria x ananassa HOM05D007405 ORTHO05D009256 2.6e-18 98.2 101 45.5
SMO367G0452 Selaginella moellendorffii HOM05D007405 ORTHO05D009256 7.0e-16 90.1 53 71.7
Nitab4.5_0000564g0400 Nicotiana tabacum HOM05D007405 ORTHO05D009256 1.6e-15 89.0 66 60.6
Actinidia06059 Actinidia chinensis HOM05D007405 ORTHO05D009256 2.0e-10 72.0 175 32.0
vmacro20006 Vaccinium macrocarpon HOM05D002479 ORTHO05D002675 4.8e-09 67.4 127 30.7
HanXRQChr06g0184931 Helianthus annuus HOM05D002479 ORTHO05D002675 6.3e-09 67.0 124 32.3
CANSAT78G2316 Cannabis sativa HOM05D002479 ORTHO05D002675 1.4e-08 65.9 88 33.0
Eucgr.J02141 Eucalyptus grandis HOM05D007405 ORTHO05D009256 2.4e-08 65.1 53 58.5
CSS0026566 Camellia sinensis var. sinensis HOM05D002479 ORTHO05D002675 3.1e-08 64.7 87 33.3
CSS0032076 Camellia sinensis var. sinensis HOM05D002479 ORTHO05D002675 3.1e-08 64.7 87 33.3
Dinv05730 Davidia involucrata HOM05D002479 ORTHO05D002675 3.1e-08 64.7 94 34.0
Rhsim05G0175800 Rhododendron simsii HOM05D002479 ORTHO05D002675 4.1e-08 64.3 87 32.2
Cfa008402 Carpinus fangiana HOM05D002479 ORTHO05D002675 9.1e-08 63.2 88 31.8
Actinidia06062 Actinidia chinensis HOM05D007405 ORTHO05D009256 1.2e-07 62.8 166 31.9
Actinidia06778 Actinidia chinensis HOM05D002479 ORTHO05D002675 1.2e-07 62.8 94 33.0
Actinidia07832 Actinidia chinensis HOM05D002479 ORTHO05D002675 1.2e-07 62.8 94 33.0
GSVIVG01018090001 Vitis vinifera HOM05D002479 ORTHO05D002675 1.6e-07 62.4 88 30.7
CAN.G749.33 Capsicum annuum HOM05D002479 ORTHO05D002675 2.0e-07 62.0 94 34.0
PGR004G1668 Punica granatum HOM05D002479 ORTHO05D002675 2.0e-07 62.0 87 32.2
AagrBONN_evm.TU.Sc2ySwM_344.385__386 Anthoceros agrestis HOM05D002479 ORTHO05D002675 3.5e-07 61.2 87 34.5
HanXRQChr15g0480341 Helianthus annuus HOM05D002479 ORTHO05D002675 3.5e-07 61.2 109 31.2
ClCG01G020210 Citrullus lanatus HOM05D002479 ORTHO05D002675 4.5e-07 60.8 94 34.0
Psat2g057680 Pisum sativum HOM05D000001 ORTHO05D000003 4.5e-07 60.8 123 26.0
SMO364G0108 Selaginella moellendorffii HOM05D002479 ORTHO05D002675 4.5e-07 60.8 121 28.1
Sopen11g002630 Solanum pennellii HOM05D000001 ORTHO05D000003 4.5e-07 60.8 126 27.8
Atru.chr4.2287 Acer truncatum HOM05D002479 ORTHO05D002675 5.9e-07 60.5 95 31.6
Ah.01g005230 Amaranthus hybridus HOM05D002479 ORTHO05D002675 5.9e-07 60.5 121 30.6
CSS0030527 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 5.9e-07 60.5 138 27.5
Mapoly0019s0056 Marchantia polymorpha HOM05D002479 ORTHO05D002675 5.9e-07 60.5 93 32.3
PSO170G3719 Papaver somniferum HOM05D002479 ORTHO05D002675 5.9e-07 60.5 88 28.4
QL06p014970 Quercus lobata HOM05D002479 ORTHO05D002675 5.9e-07 60.5 87 27.6
Aqoxy4G01360 Aquilegia oxysepala HOM05D002479 ORTHO05D002675 7.7e-07 60.1 121 28.9
AagrBONN_evm.TU.Sc2ySwM_228.2543 Anthoceros agrestis HOM05D002244 ORTHO05D002269 1.0e-06 59.7 92 34.8
Eucgr.J00110 Eucalyptus grandis HOM05D000001 ORTHO05D000003 1.0e-06 59.7 170 22.9
PSO528G0065 Papaver somniferum HOM05D002479 ORTHO05D002675 1.0e-06 59.7 87 28.7
Sc06g0009220 Simmondsia chinensis HOM05D002479 ORTHO05D002675 1.0e-06 59.7 72 31.9
Ciclev10004292m.g Citrus clementina HOM05D002479 ORTHO05D002675 1.3e-06 59.3 87 28.7
Haze_11266 Corylus avellana HOM05D002479 ORTHO05D002675 1.3e-06 59.3 88 30.7
Lj6g0009664 Lotus japonicus HOM05D002479 ORTHO05D002675 1.3e-06 59.3 88 31.8
MD13G1203500 Malus domestica HOM05D002479 ORTHO05D002675 1.3e-06 59.3 82 34.1
Pp3c14_16110 Physcomitrium patens HOM05D000001 ORTHO05D000003 1.3e-06 59.3 161 21.1
Prupe.1G026500 Prunus persica HOM05D002479 ORTHO05D002675 1.3e-06 59.3 88 30.7
ECA233G5632 Erigeron canadensis HOM05D003117 ORTHO05D003612 1.7e-06 58.9 132 31.1
FAN28G2170 Fragaria x ananassa HOM05D000001 ORTHO05D001705 1.7e-06 58.9 126 28.6
TAR626G0455 Trochodendron aralioides HOM05D002479 ORTHO05D002675 1.7e-06 58.9 72 33.3
Aa31LG8G9510 Aethionema arabicum HOM05D002479 ORTHO05D002675 2.3e-06 58.5 87 26.4
AagrBONN_evm.TU.Sc2ySwM_337.1 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.3e-06 58.5 146 26.0
AagrBONN_evm.TU.Sc2ySwM_344.1460 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.3e-06 58.5 146 26.0
AagrBONN_evm.TU.Sc2ySwM_344.1500 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.3e-06 58.5 146 26.0
CSS0023623 Camellia sinensis var. sinensis HOM05D000001 ORTHO05D000003 2.3e-06 58.5 138 26.8
PSO210G1488 Papaver somniferum HOM05D002479 ORTHO05D002675 2.3e-06 58.5 72 31.9
Solyc11g006700.1 Solanum lycopersicum HOM05D000001 ORTHO05D000003 2.3e-06 58.5 126 27.0
EL10Ac4g09674 Beta vulgaris HOM05D002479 ORTHO05D002675 2.9e-06 58.2 89 32.6
Lsat_1_v5_gn_3_39301 Lactuca sativa HOM05D002479 ORTHO05D002675 2.9e-06 58.2 79 32.9
Dinv01391 Davidia involucrata HOM05D002479 ORTHO05D002675 3.8e-06 57.8 72 31.9
Oeu033988.1 Olea europaea HOM05D000001 ORTHO05D000003 3.8e-06 57.8 129 26.4
CiPaw.01G192700 Carya illinoinensis HOM05D002479 ORTHO05D002675 5.0e-06 57.4 75 32.0
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 5.0e-06 57.4 78 41.0
MBI07_g41892_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 5.0e-06 57.4 139 25.9
Nitab4.5_0001047g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 5.0e-06 57.4 126 26.2
Nitab4.5_0003787g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 5.0e-06 57.4 126 26.2
Nitab4.5_0007585g0010 Nicotiana tabacum HOM05D002479 ORTHO05D002675 5.0e-06 57.4 129 28.7
Solyc09g083110.3 Solanum lycopersicum HOM05D002479 ORTHO05D002675 5.0e-06 57.4 94 31.9
Actinidia18612 Actinidia chinensis HOM05D000001 ORTHO05D000003 6.6e-06 57.0 128 25.0
Haze_07356 Corylus avellana HOM05D000001 ORTHO05D012157 6.6e-06 57.0 169 21.3
ECA232G0340 Erigeron canadensis HOM05D000001 ORTHO05D010118 6.6e-06 57.0 145 25.5
FvH4_4g02020 Fragaria vesca HOM05D002479 ORTHO05D002675 6.6e-06 57.0 82 32.9
FAN12G1103 Fragaria x ananassa HOM05D002479 ORTHO05D002675 6.6e-06 57.0 82 32.9
FAN22G0099 Fragaria x ananassa HOM05D002479 ORTHO05D002675 6.6e-06 57.0 82 32.9
Lju1074C3T5 Lonicera japonica HOM05D002479 ORTHO05D002675 6.6e-06 57.0 94 31.9
Ah.06g188680 Amaranthus hybridus HOM05D002479 ORTHO05D002675 8.6e-06 56.6 88 28.4
Ah.06g188690 Amaranthus hybridus HOM05D002479 ORTHO05D002675 8.6e-06 56.6 88 28.4
Haze_07358 Corylus avellana HOM05D000001 ORTHO05D012157 8.6e-06 56.6 133 22.6
ECA246G4149 Erigeron canadensis HOM05D002479 ORTHO05D002675 8.6e-06 56.6 72 31.9
FAN17G1196 Fragaria x ananassa HOM05D002479 ORTHO05D002675 8.6e-06 56.6 82 31.7
Peaxi162Scf00125g00054 Petunia axillaris HOM05D000001 ORTHO05D000003 8.6e-06 56.6 129 26.4
Pp3c9_6880 Physcomitrium patens HOM05D002244 ORTHO05D002269 8.6e-06 56.6 96 28.1


User provided reference genes

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