Gene: Pp3c14_16110

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c14_16110
  • Transcript Identifier Pp3c14_16110V3.2
  • Gene Type Coding gene
  • Location Chr14 : 10220547-10223048 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c14_16110V3.2
  • pacid 32963318
  • alias Phypa_181369
  • alias Pp1s48_253V6
  • alias Phpat.014G061900
  • uniprot A9S537

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G22690
GO:0016556
ISO
PLAZA Integrative OrthologymRNA modification AT5G55740
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT3G46790
GO:0010027
ISO
PLAZA Integrative Orthologythylakoid membrane organization AT3G22690
GO:0048564
ISO
PLAZA Integrative Orthologyphotosystem I assembly AT3G22690
GO:0010207
ISO
PLAZA Integrative Orthologyphotosystem II assembly AT3G22690
GO:0031426
ISO
PLAZA Integrative Orthologypolycistronic mRNA processing AT3G46790
GO:1900864
ISO
PLAZA Integrative Orthologymitochondrial RNA modification AT3G13880
GO:1900865
ISO
PLAZA Integrative Orthologychloroplast RNA modification AT3G13880
GO:0009644
ISO
PLAZA Integrative Orthologyresponse to high light intensity AT3G22690
GO:0010380
ISO
PLAZA Integrative Orthologyregulation of chlorophyll biosynthetic process AT3G22690
GO:0009451
IBA
GOA DatabaseRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G55740
GO:0004519
ISO
PLAZA Integrative Orthologyendonuclease activity AT1G59720
GO:0005515
IEA
InterProprotein binding
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G22690
GO:0043231
IBA
GOA Databaseintracellular membrane-bounded organelle

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR032867 DYW domain
Mapman id Description
35.1 not assigned.annotated