Gene: Solyc02g087560.1

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc02g087560.1
  • Transcript Identifier Solyc02g087560.1.1
  • Gene Type Coding gene
  • Location SL4.0ch02 : 48000262-48002259 : positive

Gene Family Information

  • ID HOM05D007405
  • #Genes/#Species 104/84
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc02g087560.1.1
  • uniprot A0A3Q7F8L5
  • gene_id Solyc02g087560

Descriptions

  • Description Pentatricopeptide repeat (AHRD V3.3 *** A0A200QC49_9MAGN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT5G39980
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT5G39980

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G39980

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IBA
GOA Databasechloroplast
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G39980
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G39980

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
35.1 not assigned.annotated