Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_20900 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.5e-86 322.0 158 100.0
SEGI_09432 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.1e-73 280.0 158 88.0
SEGI_16111 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 7.2e-49 197.6 146 69.9
Mapoly0033s0098 Marchantia polymorpha HOM05D004644 ORTHO05D005700 1.1e-17 94.0 111 44.1
CBR_g31861 Chara braunii HOM05D004644 ORTHO05D005700 2.8e-16 89.4 80 51.2
SEGI_30494 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 3.6e-16 89.0 68 57.4
Lj1g0007058 Lotus japonicus HOM05D004644 ORTHO05D005700 3.1e-15 85.9 74 52.7
Lalb_Chr20g0112551 Lupinus albus HOM05D004644 ORTHO05D005700 8.9e-15 84.3 74 50.0
Pp3c22_3930 Physcomitrium patens HOM05D004644 ORTHO05D005700 5.8e-14 81.6 121 37.2
Potri.006G122800 Populus trichocarpa HOM05D004644 ORTHO05D005700 5.8e-14 81.6 71 50.7
THA.LOC104816355 Tarenaya hassleriana HOM05D004644 ORTHO05D005700 9.8e-14 80.9 78 43.6
Lsat_1_v5_gn_2_30721 Lactuca sativa HOM05D004644 ORTHO05D005700 2.2e-13 79.7 83 48.2
Lj1g0025951 Lotus japonicus HOM05D004644 ORTHO05D005700 2.2e-13 79.7 78 46.2
VMungo1383G2434 Vigna mungo HOM05D004644 ORTHO05D005700 2.9e-13 79.3 78 43.6
Cpa.g.sc102.17 Carica papaya HOM05D004644 ORTHO05D005700 4.9e-13 78.6 75 46.7
DCAR_009308 Daucus carota HOM05D004644 ORTHO05D005700 4.9e-13 78.6 71 49.3
Gohir.A09G145300 Gossypium hirsutum HOM05D004644 ORTHO05D005700 4.9e-13 78.6 79 44.3
EL10Ac7g16657 Beta vulgaris HOM05D004644 ORTHO05D005700 6.4e-13 78.2 79 49.4
Gohir.D09G141400 Gossypium hirsutum HOM05D004644 ORTHO05D005700 6.4e-13 78.2 79 44.3
Gorai.006G162300 Gossypium raimondii HOM05D004644 ORTHO05D005700 6.4e-13 78.2 79 44.3
Sabra06G0097000 Salix brachista HOM05D004644 ORTHO05D005700 8.3e-13 77.8 89 41.6
SEGI_00616 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 8.3e-13 77.8 194 30.4
TPR.G32811 Trifolium pratense HOM05D004644 ORTHO05D005700 8.3e-13 77.8 72 45.8
Carub.0006s0226 Capsella rubella HOM05D004644 ORTHO05D005700 1.1e-12 77.4 111 35.1
vmacro07303 Vaccinium macrocarpon HOM05D004644 ORTHO05D005700 1.1e-12 77.4 69 47.8
Rhsim03G0090100 Rhododendron simsii HOM05D004644 ORTHO05D005700 1.4e-12 77.0 74 45.9
BcaB05g21841 Brassica carinata HOM05D004644 ORTHO05D005700 1.9e-12 76.6 110 39.1
CSS0046520 Camellia sinensis var. sinensis HOM05D004644 ORTHO05D005700 1.9e-12 76.6 76 46.1
COL.COLO4_26937 Corchorus olitorius HOM05D004644 ORTHO05D005700 1.9e-12 76.6 79 44.3
Dinv35798 Davidia involucrata HOM05D004644 ORTHO05D005700 1.9e-12 76.6 98 38.8
Phvul.001G180000 Phaseolus vulgaris HOM05D004644 ORTHO05D005700 1.9e-12 76.6 72 45.8
Manes.09G065000 Manihot esculenta HOM05D004644 ORTHO05D005700 2.4e-12 76.3 74 45.9
Medtr7g102280 Medicago truncatula HOM05D004644 ORTHO05D005700 2.4e-12 76.3 72 43.1
Sed0011501 Sechium edule HOM05D004644 ORTHO05D005700 2.4e-12 76.3 77 42.9
TAR633G1934 Trochodendron aralioides HOM05D004644 ORTHO05D005700 2.4e-12 76.3 77 45.5
AL6G12810 Arabidopsis lyrata HOM05D004644 ORTHO05D005700 3.2e-12 75.9 72 43.1
ClCG04G009350 Citrullus lanatus HOM05D004644 ORTHO05D005700 3.2e-12 75.9 105 37.1
Lj2C119G5 Lonicera japonica HOM05D004644 ORTHO05D005700 3.2e-12 75.9 84 41.7
Psat3g041720 Pisum sativum HOM05D004644 ORTHO05D005700 3.2e-12 75.9 72 43.1
PGSC0003DMG402003893 Solanum tuberosum HOM05D004644 ORTHO05D005700 3.2e-12 75.9 69 50.7
AT5G03450 Arabidopsis thaliana HOM05D004644 ORTHO05D005700 5.4e-12 75.1 72 43.1
Cfa017634 Carpinus fangiana HOM05D004644 ORTHO05D005700 5.4e-12 75.1 69 47.8
Haze_20518 Corylus avellana HOM05D004644 ORTHO05D005700 5.4e-12 75.1 69 47.8
Duzib093G1101 Durio zibethinus HOM05D004644 ORTHO05D005700 5.4e-12 75.1 79 43.0
ECA238G2777 Erigeron canadensis HOM05D004644 ORTHO05D005700 5.4e-12 75.1 95 40.0
Glyma.03G184600 Glycine max HOM05D004644 ORTHO05D005700 5.4e-12 75.1 79 43.0
Thecc.05G069300 Theobroma cacao HOM05D004644 ORTHO05D005700 5.4e-12 75.1 79 41.8
arahy.Tifrunner.gnm1.ann1.K7JVCN Arachis hypogaea HOM05D004644 ORTHO05D005700 7.1e-12 74.7 102 37.3
arahy.Tifrunner.gnm1.ann1.W70S5M Arachis hypogaea HOM05D004644 ORTHO05D005700 7.1e-12 74.7 102 37.3
Prupe.7G127800 Prunus persica HOM05D004644 ORTHO05D005700 7.1e-12 74.7 69 46.4
BraA02t04761Z Brassica rapa HOM05D004644 ORTHO05D005700 9.2e-12 74.3 73 42.5
MELO3C024470.2 Cucumis melo HOM05D004644 ORTHO05D005700 1.2e-11 73.9 105 34.3
Thhalv10013047m.g Eutrema salsugineum HOM05D004644 ORTHO05D005700 1.2e-11 73.9 110 36.4
SEGI_40598 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 1.2e-11 73.9 79 50.6
C02p01080 Brassica napus HOM05D004644 ORTHO05D005700 1.6e-11 73.6 104 37.5
Prupe.7G127600 Prunus persica HOM05D004644 ORTHO05D005700 1.6e-11 73.6 68 44.1
Aqoxy2G01714 Aquilegia oxysepala HOM05D004644 ORTHO05D005700 2.1e-11 73.2 74 47.3
ECA233G2118 Erigeron canadensis HOM05D004644 ORTHO05D005700 2.1e-11 73.2 71 47.9
GSVIVG01033660001 Vitis vinifera HOM05D004644 ORTHO05D005700 2.1e-11 73.2 70 44.3
HanXRQChr13g0400851 Helianthus annuus HOM05D004644 ORTHO05D005700 2.7e-11 72.8 67 49.3
Potri.010G228000 Populus trichocarpa HOM05D004644 ORTHO05D005700 2.7e-11 72.8 104 35.6
SGA_v2.0_scaffold40G15487 Striga asiatica HOM05D004644 ORTHO05D005700 2.7e-11 72.8 76 44.7
TWI53G0078 Tripterygium wilfordii HOM05D004644 ORTHO05D005700 2.7e-11 72.8 104 37.5
CARHR209890 Cardamine hirsuta HOM05D004644 ORTHO05D005700 3.5e-11 72.4 111 34.2
Eucgr.A01659 Eucalyptus grandis HOM05D004644 ORTHO05D005700 3.5e-11 72.4 69 43.5
FAN02G4433 Fragaria x ananassa HOM05D004644 ORTHO05D005700 3.5e-11 72.4 68 47.1
FAN05G3668 Fragaria x ananassa HOM05D004644 ORTHO05D005700 3.5e-11 72.4 68 47.1
FAN05G5479 Fragaria x ananassa HOM05D004644 ORTHO05D005700 3.5e-11 72.4 68 47.1
Lj3C987G12 Lonicera japonica HOM05D004644 ORTHO05D005700 3.5e-11 72.4 69 46.4
QL07p043006 Quercus lobata HOM05D004644 ORTHO05D005700 3.5e-11 72.4 69 44.9
Solyc09g008330.3 Solanum lycopersicum HOM05D004644 ORTHO05D005700 3.5e-11 72.4 69 47.8
Actinidia28913 Actinidia chinensis HOM05D004644 ORTHO05D005700 4.6e-11 72.0 104 32.7
CsaV3_6G039930 Cucumis sativus L. HOM05D004644 ORTHO05D005700 4.6e-11 72.0 105 36.2
HanXRQChr02g0051711 Helianthus annuus HOM05D004644 ORTHO05D005700 4.6e-11 72.0 77 45.5
Sabra10G0176300 Salix brachista HOM05D004644 ORTHO05D005700 4.6e-11 72.0 104 35.6
Cc06_g04380 Coffea canephora HOM05D004644 ORTHO05D005700 6.0e-11 71.6 117 38.5
Sc02g0001560 Simmondsia chinensis HOM05D004644 ORTHO05D005700 6.0e-11 71.6 72 44.4
Zm00001eb000650 Zea mays HOM05D004644 ORTHO05D005700 6.0e-11 71.6 69 44.9
BolC2t06098H Brassica oleracea HOM05D004644 ORTHO05D005700 7.8e-11 71.2 109 33.0
Lsat_1_v5_gn_6_24480 Lactuca sativa HOM05D004644 ORTHO05D005700 7.8e-11 71.2 71 46.5
Sp6g39290 Schrenkiella parvula HOM05D004644 ORTHO05D005700 1.0e-10 70.9 113 31.0
FvH4_6g16560 Fragaria vesca HOM05D004644 ORTHO05D005700 1.7e-10 70.1 68 45.6
Lsat_1_v5_gn_6_24500 Lactuca sativa HOM05D004644 ORTHO05D005700 3.9e-10 68.9 71 46.5
PSO801G0041 Papaver somniferum HOM05D004644 ORTHO05D005700 6.6e-10 68.2 74 37.8
Prupe.2G207900 Prunus persica HOM05D004644 ORTHO05D005700 8.6e-10 67.8 77 42.9
Sc02g0001570 Simmondsia chinensis HOM05D004644 ORTHO05D005700 8.6e-10 67.8 73 42.5
Sopen09g003150 Solanum pennellii HOM05D004644 ORTHO05D005700 8.6e-10 67.8 101 36.6
CARHR209550 Cardamine hirsuta HOM05D004644 ORTHO05D005700 1.1e-09 67.4 74 40.5
Atru.chr8.1780 Acer truncatum HOM05D004644 ORTHO05D005700 1.9e-09 66.6 69 40.6
MSTRG.5768 Avicennia marina HOM05D004644 ORTHO05D005700 1.9e-09 66.6 87 36.8
AUR62026918 Chenopodium quinoa HOM05D004644 ORTHO05D005700 1.9e-09 66.6 90 42.2
QL08p054123 Quercus lobata HOM05D004644 ORTHO05D005700 1.9e-09 66.6 72 44.4
AUR62042062 Chenopodium quinoa HOM05D004644 ORTHO05D005700 2.5e-09 66.2 90 42.2
FAN09G2255 Fragaria x ananassa HOM05D004644 ORTHO05D005700 2.5e-09 66.2 104 38.5
MCO15G141 Micromonas commoda HOM05D004644 ORTHO05D005700 2.5e-09 66.2 67 44.8
PGR004G1497 Punica granatum HOM05D004644 ORTHO05D005700 2.5e-09 66.2 102 34.3
SEGI_22440 Sequoiadendron giganteum HOM05D004644 ORTHO05D005700 2.5e-09 66.2 106 37.7
FAN14G1031 Fragaria x ananassa HOM05D004644 ORTHO05D005700 4.3e-09 65.5 59 50.8
Oeu045234.3 Olea europaea HOM05D004644 ORTHO05D005700 4.3e-09 65.5 94 37.2
Os03g0108200 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 4.3e-09 65.5 68 39.7
RcHm_v2.0_Chr3g0470481 Rosa chinensis HOM05D004644 ORTHO05D005700 4.3e-09 65.5 100 34.0
COL.COLO4_26936 Corchorus olitorius HOM05D004644 ORTHO05D005700 3.6e-08 62.4 79 39.2
MD01G1102200 Malus domestica HOM05D004644 ORTHO05D005700 3.6e-08 62.4 65 43.1
MD12G1109100 Malus domestica HOM05D004644 ORTHO05D005700 1.1e-07 60.8 64 43.8
Os10g0545600 Oryza sativa ssp. japonica HOM05D004644 ORTHO05D005700 1.1e-07 60.8 68 39.7
BcaB04g21316 Brassica carinata HOM05D002516 ORTHO05D002703 4.0e-07 58.9 88 34.1
BraA05t22828Z Brassica rapa HOM05D002516 ORTHO05D002703 5.2e-07 58.5 88 35.2
Thhalv10021611m.g Eutrema salsugineum HOM05D002516 ORTHO05D002703 8.9e-07 57.8 90 34.4
PSO339G3403 Papaver somniferum HOM05D004644 ORTHO05D005700 8.9e-07 57.8 127 32.3
Lalb_Chr10g0095071 Lupinus albus HOM05D002516 ORTHO05D002703 2.6e-06 56.2 79 38.0
unitig_8.g4114 Utricularia gibba HOM05D004644 ORTHO05D005700 2.6e-06 56.2 122 29.5
Aa31sc675G30 Aethionema arabicum HOM05D002516 ORTHO05D002703 3.4e-06 55.8 71 36.6
BcaC06g30772 Brassica carinata HOM05D002516 ORTHO05D002703 3.4e-06 55.8 72 40.3
A06p39020 Brassica napus HOM05D002516 ORTHO05D002703 3.4e-06 55.8 72 40.3
C07p39320 Brassica napus HOM05D002516 ORTHO05D002703 3.4e-06 55.8 72 40.3
BraA06t26815Z Brassica rapa HOM05D002516 ORTHO05D002703 3.4e-06 55.8 72 40.3
AL3G18470 Arabidopsis lyrata HOM05D002516 ORTHO05D002703 4.4e-06 55.5 86 34.9
CARHR081850 Cardamine hirsuta HOM05D002516 ORTHO05D002703 4.4e-06 55.5 60 41.7
C05p60160 Brassica napus HOM05D002516 ORTHO05D002703 7.6e-06 54.7 88 34.1
BolC5t34667H Brassica oleracea HOM05D002516 ORTHO05D002703 7.6e-06 54.7 88 34.1
Gohir.A11G139500 Gossypium hirsutum HOM05D002516 ORTHO05D002703 7.6e-06 54.7 59 42.4
BcaC05g29747 Brassica carinata HOM05D002516 ORTHO05D002703 9.9e-06 54.3 88 35.2
BcaC05g29849 Brassica carinata HOM05D002516 ORTHO05D002703 9.9e-06 54.3 88 34.1
CARHR183280 Cardamine hirsuta HOM05D002516 ORTHO05D002703 9.9e-06 54.3 60 40.0


User provided reference genes

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