Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_19185 Sequoiadendron giganteum HOM05D000268 ORTHO05D004469 2.7e-160 568.5 276 100.0
SEGI_11374 Sequoiadendron giganteum HOM05D000268 ORTHO05D004469 2.1e-56 223.4 174 60.9
ATR0733G136 Amborella trichopoda HOM05D000268 ORTHO05D004469 3.8e-53 212.6 184 55.4
MBI16_g10970_MAGBIO Magnolia biondii HOM05D000268 ORTHO05D004469 1.3e-48 197.6 204 47.5
Nn1g05132 Nelumbo nucifera HOM05D000268 ORTHO05D004469 1.1e-47 194.5 143 62.2
TAR625G1531 Trochodendron aralioides HOM05D000268 ORTHO05D004469 2.6e-46 189.9 169 53.8
GSVIVG01019046001 Vitis vinifera HOM05D000268 ORTHO05D004469 3.4e-46 189.5 177 50.8
MD15G1271600 Malus domestica HOM05D000268 ORTHO05D004469 1.0e-45 188.0 143 57.3
MD02G1157000 Malus domestica HOM05D000268 ORTHO05D004469 1.7e-45 187.2 143 56.6
PGR102G2765 Punica granatum HOM05D000268 ORTHO05D004469 2.9e-45 186.4 140 56.4
Oeu027319.1 Olea europaea HOM05D000268 ORTHO05D004469 5.0e-45 185.7 187 48.1
Os02g0708500 Oryza sativa ssp. japonica HOM05D000268 ORTHO05D004469 8.5e-45 184.9 148 56.8
Prupe.7G146600 Prunus persica HOM05D000268 ORTHO05D004469 8.5e-45 184.9 208 45.7
Potri.007G033000 Populus trichocarpa HOM05D000268 ORTHO05D004469 1.1e-44 184.5 143 56.6
QL06p044462 Quercus lobata HOM05D000268 ORTHO05D004469 1.1e-44 184.5 143 58.0
RcHm_v2.0_Chr2g0103021 Rosa chinensis HOM05D000268 ORTHO05D004469 1.4e-44 184.1 210 43.8
CiPaw.01G030400 Carya illinoinensis HOM05D000268 ORTHO05D004469 1.9e-44 183.7 143 56.6
CiPaw.02G013900 Carya illinoinensis HOM05D000268 ORTHO05D004469 1.9e-44 183.7 143 57.3
Haze_15153 Corylus avellana HOM05D000268 ORTHO05D004469 1.9e-44 183.7 143 57.3
CANSAT01G2579 Cannabis sativa HOM05D000268 ORTHO05D004469 2.5e-44 183.3 161 50.9
Sabra07G0028900 Salix brachista HOM05D000268 ORTHO05D004469 2.5e-44 183.3 143 56.6
MSTRG.23812 Avicennia marina HOM05D000268 ORTHO05D004469 4.2e-44 182.6 177 49.2
ClCG01G016320 Citrullus lanatus HOM05D000268 ORTHO05D004469 5.5e-44 182.2 207 44.9
CsaV3_6G042640 Cucumis sativus L. HOM05D000268 ORTHO05D004469 5.5e-44 182.2 207 44.9
MELO3C007503.2 Cucumis melo HOM05D000268 ORTHO05D004469 7.2e-44 181.8 207 44.9
Ciclev10024695m.g Citrus clementina HOM05D000268 ORTHO05D004469 9.4e-44 181.4 143 56.6
Ah.02g126300 Amaranthus hybridus HOM05D000268 ORTHO05D004469 1.2e-43 181.0 206 44.7
DCAR_010955 Daucus carota HOM05D000268 ORTHO05D004469 1.2e-43 181.0 164 52.4
Dinv39934 Davidia involucrata HOM05D000268 ORTHO05D004469 1.2e-43 181.0 164 51.2
Aqoxy5G01732 Aquilegia oxysepala HOM05D000268 ORTHO05D004469 1.6e-43 180.6 188 47.9
FvH4_1g14350 Fragaria vesca HOM05D000268 ORTHO05D004469 2.1e-43 180.3 200 44.5
FAN19G2782 Fragaria x ananassa HOM05D000268 ORTHO05D004469 2.1e-43 180.3 200 44.5
FAN26G3224 Fragaria x ananassa HOM05D000268 ORTHO05D004469 2.1e-43 180.3 200 44.5
PSO170G1741 Papaver somniferum HOM05D000268 ORTHO05D004469 2.1e-43 180.3 170 50.6
Potri.005G129800 Populus trichocarpa HOM05D000268 ORTHO05D004469 2.1e-43 180.3 143 55.9
Glyma.11G062100 Glycine max HOM05D000268 ORTHO05D004469 2.7e-43 179.9 139 56.1
Manes.13G134300 Manihot esculenta HOM05D000268 ORTHO05D004469 2.7e-43 179.9 208 44.2
PSO700G0125 Papaver somniferum HOM05D000268 ORTHO05D004469 3.6e-43 179.5 170 50.6
Hund14126 Selenicereus undatus HOM05D000268 ORTHO05D004469 3.6e-43 179.5 144 52.8
Atru.chr3.486 Acer truncatum HOM05D000268 ORTHO05D004469 7.9e-43 178.3 204 43.6
Oeu027318.1 Olea europaea HOM05D000268 ORTHO05D004469 7.9e-43 178.3 194 46.4
vmacro05281 Vaccinium macrocarpon HOM05D000268 ORTHO05D004469 1.0e-42 177.9 164 50.0
Ca_24816_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 1.8e-42 177.2 139 55.4
FAN28G1810 Fragaria x ananassa HOM05D000268 ORTHO05D004469 1.8e-42 177.2 200 43.5
Lalb_Chr05g0213051 Lupinus albus HOM05D000268 ORTHO05D004469 2.3e-42 176.8 199 45.7
SalBow1G1781 Salvia bowleyana HOM05D000268 ORTHO05D004469 2.3e-42 176.8 159 50.9
Sc03g0001070 Simmondsia chinensis HOM05D000268 ORTHO05D004469 2.3e-42 176.8 236 41.1
CSS0018552 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 3.9e-42 176.0 202 43.1
Lj2g0022074 Lotus japonicus HOM05D000268 ORTHO05D004469 3.9e-42 176.0 139 55.4
Thecc.01G044200 Theobroma cacao HOM05D000268 ORTHO05D004469 3.9e-42 176.0 143 53.8
Actinidia12097 Actinidia chinensis HOM05D000268 ORTHO05D004469 6.7e-42 175.3 211 42.7
CSS0040273 Camellia sinensis var. sinensis HOM05D000268 ORTHO05D004469 6.7e-42 175.3 203 45.3
Migut.H00513 Erythranthe guttata HOM05D000268 ORTHO05D004469 6.7e-42 175.3 187 46.5
Carub.0004s0292 Capsella rubella HOM05D000268 ORTHO05D004469 8.8e-42 174.9 199 43.2
Thhalv10000012m.g Eutrema salsugineum HOM05D000268 ORTHO05D004469 8.8e-42 174.9 164 48.8
Gohir.A02G162200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 8.8e-42 174.9 140 52.9
Gorai.003G018700 Gossypium raimondii HOM05D000268 ORTHO05D004469 8.8e-42 174.9 140 52.9
EL10Ac6g14864 Beta vulgaris HOM05D000268 ORTHO05D004469 1.1e-41 174.5 203 43.3
TWI73G0223 Tripterygium wilfordii HOM05D000268 ORTHO05D004469 1.5e-41 174.1 143 54.5
Glyma.01G180100 Glycine max HOM05D000268 ORTHO05D004469 2.0e-41 173.7 138 54.3
Gohir.D03G018350 Gossypium hirsutum HOM05D000268 ORTHO05D004469 2.0e-41 173.7 144 53.5
Duzib264G0212 Durio zibethinus HOM05D000268 ORTHO05D004469 2.5e-41 173.3 149 52.3
FAN23G1146 Fragaria x ananassa HOM05D000268 ORTHO05D004469 2.5e-41 173.3 200 43.0
Gorai.003G018800 Gossypium raimondii HOM05D000268 ORTHO05D004469 2.5e-41 173.3 183 47.5
Lalb_Chr05g0227191 Lupinus albus HOM05D000268 ORTHO05D004469 2.5e-41 173.3 202 45.5
Zm00001eb252300 Zea mays HOM05D000268 ORTHO05D004469 2.5e-41 173.3 206 43.2
Gohir.D03G018200 Gossypium hirsutum HOM05D000268 ORTHO05D004469 3.3e-41 172.9 170 48.2
Actinidia36535 Actinidia chinensis HOM05D000268 ORTHO05D004469 4.3e-41 172.6 143 53.1
AT2G23740 Arabidopsis thaliana HOM05D000268 ORTHO05D004469 4.3e-41 172.6 164 48.8
Glyma.02G060500 Glycine max HOM05D000268 ORTHO05D004469 4.3e-41 172.6 198 43.9
Gohir.A02G162100 Gossypium hirsutum HOM05D000268 ORTHO05D004469 4.3e-41 172.6 183 47.0
Rhsim10G0122500 Rhododendron simsii HOM05D000268 ORTHO05D004469 4.3e-41 172.6 164 48.8
AL4G13740 Arabidopsis lyrata HOM05D000268 ORTHO05D004469 5.7e-41 172.2 164 48.8
Phvul.002G024600 Phaseolus vulgaris HOM05D000268 ORTHO05D004469 5.7e-41 172.2 207 43.5
VMungo1215G1516 Vigna mungo HOM05D000268 ORTHO05D004469 5.7e-41 172.2 207 43.5
Glyma.16G143100 Glycine max HOM05D000268 ORTHO05D004469 7.4e-41 171.8 139 53.2
Medtr5g018850 Medicago truncatula HOM05D000268 ORTHO05D004469 7.4e-41 171.8 139 53.2
THA.LOC104807561 Tarenaya hassleriana HOM05D000268 ORTHO05D004469 9.7e-41 171.4 164 48.8
Zm00001eb188560 Zea mays HOM05D000268 ORTHO05D004469 9.7e-41 171.4 208 42.8
Peaxi162Scf00535g00417 Petunia axillaris HOM05D000268 ORTHO05D004469 1.3e-40 171.0 201 41.8
BcaC02g08548 Brassica carinata HOM05D000268 ORTHO05D004469 1.7e-40 170.6 203 43.3
C04p53050 Brassica napus HOM05D000268 ORTHO05D004469 1.7e-40 170.6 203 43.3
BolC4t26866H Brassica oleracea HOM05D000268 ORTHO05D004469 1.7e-40 170.6 203 43.3
SGA_v2.0_scaffold15G07183 Striga asiatica HOM05D000268 ORTHO05D004469 1.7e-40 170.6 180 46.7
Nitab4.5_0000483g0060 Nicotiana tabacum HOM05D000268 ORTHO05D004469 2.8e-40 169.9 171 46.2
Sp4g02670 Schrenkiella parvula HOM05D000268 ORTHO05D004469 2.8e-40 169.9 164 48.2
HPP92_007810 Vanilla planifolia HOM05D000268 ORTHO05D004469 2.8e-40 169.9 140 50.7
Lj4g0020969 Lotus japonicus HOM05D000268 ORTHO05D004469 3.7e-40 169.5 162 48.8
Aa31LG7G13140 Aethionema arabicum HOM05D000268 ORTHO05D004469 8.2e-40 168.3 143 52.4
Lj4g0005897 Lotus japonicus HOM05D000268 ORTHO05D004469 8.2e-40 168.3 160 46.9
Lj4g0026497 Lotus japonicus HOM05D000268 ORTHO05D004469 8.2e-40 168.3 159 49.1
A04p18100 Brassica napus HOM05D000268 ORTHO05D004469 1.1e-39 167.9 203 42.9
BraA04t17428Z Brassica rapa HOM05D000268 ORTHO05D004469 1.1e-39 167.9 203 42.9
Sopen02g034660 Solanum pennellii HOM05D000268 ORTHO05D004469 1.1e-39 167.9 140 52.9
CAN.G836.12 Capsicum annuum HOM05D000268 ORTHO05D004469 1.4e-39 167.5 140 52.1
Lsat_1_v5_gn_4_176280 Lactuca sativa HOM05D000268 ORTHO05D004469 1.4e-39 167.5 199 41.7
Psat2g163120 Pisum sativum HOM05D000268 ORTHO05D004469 1.4e-39 167.5 139 53.2
unitig_736.g22253 Utricularia gibba HOM05D000268 ORTHO05D004469 1.4e-39 167.5 192 42.2
Solyc02g089970.3 Solanum lycopersicum HOM05D000268 ORTHO05D004469 1.8e-39 167.2 172 45.9
BcaB06g27931 Brassica carinata HOM05D000268 ORTHO05D004469 2.4e-39 166.8 201 41.3
Mapoly0003s0206 Marchantia polymorpha HOM05D000268 ORTHO05D004469 2.4e-39 166.8 138 55.8
arahy.Tifrunner.gnm1.ann1.ISY5ET Arachis hypogaea HOM05D000268 ORTHO05D004469 5.3e-39 165.6 199 44.7
CARHR114610 Cardamine hirsuta HOM05D000268 ORTHO05D004469 2.0e-38 163.7 143 49.7
ECA232G0911 Erigeron canadensis HOM05D000268 ORTHO05D004469 2.0e-38 163.7 231 39.0
Actinidia04606 Actinidia chinensis HOM05D000268 ORTHO05D004469 2.6e-38 163.3 141 53.2
HanXRQChr09g0265141 Helianthus annuus HOM05D000268 ORTHO05D004469 4.5e-38 162.5 236 39.8
unitig_899.g15136 Utricularia gibba HOM05D000268 ORTHO05D004469 5.9e-38 162.2 140 51.4
arahy.Tifrunner.gnm1.ann1.GI7SC3 Arachis hypogaea HOM05D000268 ORTHO05D004469 1.0e-37 161.4 160 45.6
AUR62003214 Chenopodium quinoa HOM05D000268 ORTHO05D004469 1.0e-37 161.4 218 38.5
Lj3g0021520 Lotus japonicus HOM05D000268 ORTHO05D004469 1.7e-37 160.6 181 45.9
AUR62008036 Chenopodium quinoa HOM05D000268 ORTHO05D004469 2.9e-37 159.8 248 36.3
SMO304G0138 Selaginella moellendorffii HOM05D000268 ORTHO05D004469 2.9e-37 159.8 140 51.4
arahy.Tifrunner.gnm1.ann1.259MTB Arachis hypogaea HOM05D000268 ORTHO05D004469 4.2e-36 156.0 203 40.4
Nitab4.5_0004932g0040 Nicotiana tabacum HOM05D000268 ORTHO05D004469 1.6e-35 154.1 171 44.4
Pp3c19_9880 Physcomitrium patens HOM05D000268 ORTHO05D004469 5.1e-34 149.1 160 45.0
Pp3c19_9910 Physcomitrium patens HOM05D000268 ORTHO05D004469 5.1e-34 149.1 160 45.0
Psat4g090200 Pisum sativum HOM05D000268 ORTHO05D004469 2.6e-33 146.7 157 41.4
arahy.Tifrunner.gnm1.ann1.12AQES Arachis hypogaea HOM05D000268 ORTHO05D004469 7.4e-33 145.2 187 43.3
AagrBONN_evm.TU.Sc2ySwM_368.772 Anthoceros agrestis HOM05D000268 ORTHO05D004469 9.7e-33 144.8 138 50.7
Ca_22239_v3 Cicer arietinum L. HOM05D000268 ORTHO05D004469 1.7e-32 144.1 139 47.5
Pp3c22_17280 Physcomitrium patens HOM05D000268 ORTHO05D004469 4.8e-32 142.5 170 40.6
TPR.G29867 Trifolium pratense HOM05D000268 ORTHO05D004469 4.1e-31 139.4 147 45.6
Medtr4g132610 Medicago truncatula HOM05D000268 ORTHO05D004469 7.0e-31 138.7 139 43.9
Medtr8g078490 Medicago truncatula HOM05D000268 ORTHO05D004469 9.1e-31 138.3 158 43.0
TAR381G1430 Trochodendron aralioides HOM05D000268 ORTHO05D004469 1.1e-28 131.3 109 56.0
TPR.G31559 Trifolium pratense HOM05D000268 ORTHO05D004469 3.0e-26 123.2 174 35.6
CDE09G0193 Ceratophyllum demersum HOM05D000268 ORTHO05D004469 9.1e-23 111.7 130 41.5
Sabra05G0105100 Salix brachista HOM05D000268 ORTHO05D004469 5.9e-22 109.0 93 54.8
COL.COLO4_22162 Corchorus olitorius HOM05D000268 ORTHO05D004469 7.0e-15 85.5 71 56.3
SHI08705 Sapria himalayana HOM05D000268 ORTHO05D004469 3.6e-11 73.2 108 38.9
Cpa.g.sc6035.1 Carica papaya HOM05D000268 ORTHO05D004469 4.0e-10 69.7 52 59.6
Duzib187G0333 Durio zibethinus HOM05D000268 ORTHO05D004469 1.8e-07 60.8 46 58.7


User provided reference genes

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