Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_18823 Sequoiadendron giganteum HOM05D004611 ORTHO05D005794 9.2e-81 303.5 155 100.0
ATR0693G069 Amborella trichopoda HOM05D004611 ORTHO05D005794 2.0e-67 259.2 147 86.4
GSVIVG01034941001 Vitis vinifera HOM05D004611 ORTHO05D005794 2.0e-67 259.2 147 87.1
TAR362G1323 Trochodendron aralioides HOM05D004611 ORTHO05D005794 5.8e-67 257.7 147 87.1
Duzib151G0109 Durio zibethinus HOM05D004611 ORTHO05D005794 7.5e-67 257.3 147 85.7
Gorai.005G069100 Gossypium raimondii HOM05D004611 ORTHO05D005794 7.5e-67 257.3 147 85.7
Gohir.D02G061400 Gossypium hirsutum HOM05D004611 ORTHO05D005794 9.8e-67 256.9 147 85.7
Rhsim02G0001700 Rhododendron simsii HOM05D004611 ORTHO05D005794 9.8e-67 256.9 147 87.1
Atru.chr4.3104 Acer truncatum HOM05D004611 ORTHO05D005794 1.3e-66 256.5 147 86.4
Aqoxy2G02628 Aquilegia oxysepala HOM05D004611 ORTHO05D005794 1.3e-66 256.5 147 85.7
CSS0006805 Camellia sinensis var. sinensis HOM05D004611 ORTHO05D005794 1.3e-66 256.5 147 86.4
CAN.G179.3 Capsicum annuum HOM05D004611 ORTHO05D005794 1.3e-66 256.5 147 85.7
Manes.03G208700 Manihot esculenta HOM05D004611 ORTHO05D005794 1.3e-66 256.5 147 86.4
Actinidia02513 Actinidia chinensis HOM05D004611 ORTHO05D005794 1.7e-66 256.1 147 86.4
Actinidia14243 Actinidia chinensis HOM05D004611 ORTHO05D005794 1.7e-66 256.1 147 86.4
QL06p013322 Quercus lobata HOM05D004611 ORTHO05D005794 1.7e-66 256.1 147 85.7
Thecc.04G307400 Theobroma cacao HOM05D004611 ORTHO05D005794 1.7e-66 256.1 147 85.7
CiPaw.02G072100 Carya illinoinensis HOM05D004611 ORTHO05D005794 2.2e-66 255.8 147 87.1
Nitab4.5_0000062g0520 Nicotiana tabacum HOM05D004611 ORTHO05D005794 2.9e-66 255.4 147 86.4
Lj6A696G31 Lonicera japonica HOM05D004611 ORTHO05D005794 3.7e-66 255.0 147 85.7
Sc25g0001590 Simmondsia chinensis HOM05D004611 ORTHO05D005794 3.7e-66 255.0 147 86.4
AL8G23880 Arabidopsis lyrata HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 83.0
AT5G49930 Arabidopsis thaliana HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 83.0
BcaB01g02933 Brassica carinata HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 83.0
BcaC01g04844 Brassica carinata HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 83.0
A03p27560 Brassica napus HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 83.0
C03p33270 Brassica napus HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 83.0
BolC3t15649H Brassica oleracea HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 83.0
BraA03t11969Z Brassica rapa HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 83.0
CARHR258790 Cardamine hirsuta HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 83.0
Migut.N00024 Erythranthe guttata HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 85.0
Thhalv10012510m.g Eutrema salsugineum HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 83.0
Oeu045272.1 Olea europaea HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 85.7
Peaxi162Scf00126g01513 Petunia axillaris HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 85.0
Sp6g11490 Schrenkiella parvula HOM05D004611 ORTHO05D005794 4.9e-66 254.6 147 83.0
Gohir.A02G056200 Gossypium hirsutum HOM05D004611 ORTHO05D005794 6.4e-66 254.2 147 84.4
vmacro15164 Vaccinium macrocarpon HOM05D004611 ORTHO05D005794 6.4e-66 254.2 147 87.1
MSTRG.21753 Avicennia marina HOM05D004611 ORTHO05D005794 8.3e-66 253.8 147 85.7
CsaV3_6G000020 Cucumis sativus L. HOM05D004611 ORTHO05D005794 8.3e-66 253.8 147 85.0
PSO541G3737 Papaver somniferum HOM05D004611 ORTHO05D005794 8.3e-66 253.8 147 85.0
PSO675G3276 Papaver somniferum HOM05D004611 ORTHO05D005794 8.3e-66 253.8 147 85.0
Aa31LG3G6800 Aethionema arabicum HOM05D004611 ORTHO05D005794 1.1e-65 253.4 147 83.0
ClCG06G004360 Citrullus lanatus HOM05D004611 ORTHO05D005794 1.1e-65 253.4 147 85.0
Cc03_g00470 Coffea canephora HOM05D004611 ORTHO05D005794 1.1e-65 253.4 147 85.0
Dinv15127 Davidia involucrata HOM05D004611 ORTHO05D005794 1.1e-65 253.4 147 84.4
Solyc01g057850.4 Solanum lycopersicum HOM05D004611 ORTHO05D005794 1.1e-65 253.4 147 84.4
Sopen01g023180 Solanum pennellii HOM05D004611 ORTHO05D005794 1.1e-65 253.4 147 84.4
PGSC0003DMG401001235 Solanum tuberosum HOM05D004611 ORTHO05D005794 1.1e-65 253.4 147 84.4
Ah.07g203900 Amaranthus hybridus HOM05D004611 ORTHO05D005794 1.4e-65 253.1 147 83.7
EL10Ac3g06291 Beta vulgaris HOM05D004611 ORTHO05D005794 1.4e-65 253.1 147 85.0
Cpa.g.sc146.72 Carica papaya HOM05D004611 ORTHO05D005794 1.4e-65 253.1 147 85.7
MELO3C021251.2 Cucumis melo HOM05D004611 ORTHO05D005794 1.4e-65 253.1 147 85.0
HanXRQChr11g0353941 Helianthus annuus HOM05D004611 ORTHO05D005794 1.4e-65 253.1 147 85.0
Sed0020756 Sechium edule HOM05D004611 ORTHO05D005794 1.4e-65 253.1 147 84.4
THA.LOC104818864 Tarenaya hassleriana HOM05D004611 ORTHO05D005794 1.4e-65 253.1 147 82.3
TWI73G0848 Tripterygium wilfordii HOM05D004611 ORTHO05D005794 1.9e-65 252.7 147 85.0
Carub.0008s0980 Capsella rubella HOM05D004611 ORTHO05D005794 2.4e-65 252.3 147 82.3
DCAR_030442 Daucus carota HOM05D004611 ORTHO05D005794 2.4e-65 252.3 147 84.4
Lalb_Chr18g0058501 Lupinus albus HOM05D004611 ORTHO05D005794 2.4e-65 252.3 147 83.7
COL.COLO4_34558 Corchorus olitorius HOM05D004611 ORTHO05D005794 3.2e-65 251.9 147 83.0
MD16G1147800 Malus domestica HOM05D004611 ORTHO05D005794 4.1e-65 251.5 147 84.4
AUR62002591 Chenopodium quinoa HOM05D004611 ORTHO05D005794 5.4e-65 251.1 147 83.0
MBI19_g32689_MAGBIO Magnolia biondii HOM05D004611 ORTHO05D005794 5.4e-65 251.1 147 84.4
Potri.008G101200 Populus trichocarpa HOM05D004611 ORTHO05D005794 5.4e-65 251.1 147 84.4
CANSAT78G0742 Cannabis sativa HOM05D004611 ORTHO05D005794 7.0e-65 250.8 147 84.4
ECA247G1486 Erigeron canadensis HOM05D004611 ORTHO05D005794 7.0e-65 250.8 147 85.0
Eucgr.H04083 Eucalyptus grandis HOM05D004611 ORTHO05D005794 7.0e-65 250.8 147 84.4
arahy.Tifrunner.gnm1.ann1.J0E0JD Arachis hypogaea HOM05D004611 ORTHO05D005794 9.2e-65 250.4 147 83.7
arahy.Tifrunner.gnm1.ann1.VX19JK Arachis hypogaea HOM05D004611 ORTHO05D005794 9.2e-65 250.4 147 83.7
Cfa015689 Carpinus fangiana HOM05D004611 ORTHO05D005794 9.2e-65 250.4 147 85.0
Ca_00946_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 9.2e-65 250.4 147 83.7
Ca_00952_v3 Cicer arietinum L. HOM05D004611 ORTHO05D005794 9.2e-65 250.4 147 83.7
Lsat_1_v5_gn_1_40220 Lactuca sativa HOM05D004611 ORTHO05D005794 9.2e-65 250.4 147 83.7
Lj6g0013514 Lotus japonicus HOM05D004611 ORTHO05D005794 9.2e-65 250.4 147 83.7
PGR004G0015 Punica granatum HOM05D004611 ORTHO05D005794 9.2e-65 250.4 147 84.4
Glyma.15G136900 Glycine max HOM05D004611 ORTHO05D005794 1.2e-64 250.0 147 83.7
Psat1g162720 Pisum sativum HOM05D004611 ORTHO05D005794 1.2e-64 250.0 147 83.7
AUR62030016 Chenopodium quinoa HOM05D004611 ORTHO05D005794 1.6e-64 249.6 147 83.0
MD13G1148000 Malus domestica HOM05D004611 ORTHO05D005794 1.6e-64 249.6 147 84.4
TPR.G10113 Trifolium pratense HOM05D004611 ORTHO05D005794 1.6e-64 249.6 147 83.7
CDE02G0179 Ceratophyllum demersum HOM05D004611 ORTHO05D005794 2.1e-64 249.2 147 81.6
FvH4_4g20770 Fragaria vesca HOM05D004611 ORTHO05D005794 2.1e-64 249.2 147 82.3
FAN12G0652 Fragaria x ananassa HOM05D004611 ORTHO05D005794 2.1e-64 249.2 147 82.3
Nn8g40813 Nelumbo nucifera HOM05D004611 ORTHO05D005794 2.1e-64 249.2 147 83.0
HPP92_010927 Vanilla planifolia HOM05D004611 ORTHO05D005794 2.1e-64 249.2 147 81.6
Glyma.09G031900 Glycine max HOM05D004611 ORTHO05D005794 2.7e-64 248.8 147 83.0
Phvul.006G121000 Phaseolus vulgaris HOM05D004611 ORTHO05D005794 2.7e-64 248.8 147 82.3
Prupe.1G111500 Prunus persica HOM05D004611 ORTHO05D005794 2.7e-64 248.8 147 83.7
RcHm_v2.0_Chr4g0426211 Rosa chinensis HOM05D004611 ORTHO05D005794 2.7e-64 248.8 147 82.3
Pp3c6_29680 Physcomitrium patens HOM05D004611 ORTHO05D005794 4.6e-64 248.1 147 81.6
VMungo0540G0237 Vigna mungo HOM05D004611 ORTHO05D005794 4.6e-64 248.1 147 82.3
FAN07G0444 Fragaria x ananassa HOM05D004611 ORTHO05D005794 1.3e-63 246.5 147 81.0
Haze_00831 Corylus avellana HOM05D004611 ORTHO05D005794 3.9e-63 245.0 144 85.4
Mapoly0029s0152 Marchantia polymorpha HOM05D004611 ORTHO05D005794 6.6e-63 244.2 147 82.3
DCAR_002526 Daucus carota HOM05D004611 ORTHO05D005794 8.6e-63 243.8 147 81.6
Sabra08G0076500 Salix brachista HOM05D004611 ORTHO05D005794 8.6e-63 243.8 142 84.5
Os12g0564600 Oryza sativa ssp. japonica HOM05D004611 ORTHO05D005794 7.3e-62 240.7 147 80.3
AagrBONN_evm.TU.Sc2ySwM_344.977 Anthoceros agrestis HOM05D004611 ORTHO05D005794 1.6e-61 239.6 144 81.2
Zm00001eb136770 Zea mays HOM05D004611 ORTHO05D005794 2.1e-61 239.2 147 79.6
Ciclev10004185m.g Citrus clementina HOM05D004611 ORTHO05D005794 4.7e-61 238.0 177 70.6
arahy.Tifrunner.gnm1.ann1.PAF7VJ Arachis hypogaea HOM05D004611 ORTHO05D005794 8.9e-60 233.8 147 81.0
SGA_v2.0_scaffold123G33405 Striga asiatica HOM05D004611 ORTHO05D005794 8.9e-60 233.8 147 81.6
CBR_g49302 Chara braunii HOM05D004611 ORTHO05D005794 1.2e-59 233.4 147 78.9
SMO356G0321 Selaginella moellendorffii HOM05D004611 ORTHO05D005794 5.8e-59 231.1 145 79.3
GSVIVG01017617001 Vitis vinifera HOM05D004611 ORTHO05D005794 1.9e-57 226.1 143 79.7
PRCOL_00000926 Prasinoderma coloniale HOM05D004611 ORTHO05D005794 5.4e-49 198.0 147 65.3
Actinidia07517 Actinidia chinensis HOM05D004611 ORTHO05D005794 3.0e-47 192.2 106 91.5
arahy.Tifrunner.gnm1.ann1.MSK2EL Arachis hypogaea HOM05D004611 ORTHO05D005794 2.4e-44 182.6 113 78.8
arahy.Tifrunner.gnm1.ann1.631YT7 Arachis hypogaea HOM05D004611 ORTHO05D005794 5.8e-43 177.9 111 78.4
arahy.Tifrunner.gnm1.ann1.80REVR Arachis hypogaea HOM05D004611 ORTHO05D005794 7.6e-43 177.6 119 73.1
arahy.Tifrunner.gnm1.ann1.N4MQ0H Arachis hypogaea HOM05D004611 ORTHO05D005794 2.2e-42 176.0 113 76.1
arahy.Tifrunner.gnm1.ann1.G1FZ3Z Arachis hypogaea HOM05D004611 ORTHO05D005794 4.9e-42 174.9 116 74.1
arahy.Tifrunner.gnm1.ann1.F9ANIH Arachis hypogaea HOM05D004611 ORTHO05D005794 1.3e-39 166.8 106 83.0
arahy.Tifrunner.gnm1.ann1.KEPZ3C Arachis hypogaea HOM05D004611 ORTHO05D005794 1.9e-38 162.9 109 75.2
arahy.Tifrunner.gnm1.ann1.LTB099 Arachis hypogaea HOM05D004611 ORTHO05D005794 4.8e-37 158.3 99 80.8
Actinidia25067 Actinidia chinensis HOM05D004611 ORTHO05D005794 2.0e-35 152.9 89 85.4
unitig_746.g26903 Utricularia gibba HOM05D004611 ORTHO05D005794 9.9e-35 150.6 142 58.5
MCO13G239 Micromonas commoda HOM05D004611 ORTHO05D005794 3.5e-32 142.1 150 49.3
Cre17.g734961 Chlamydomonas reinhardtii HOM05D004611 ORTHO05D005794 5.7e-22 108.2 148 44.6
Cfa025106 Carpinus fangiana HOM05D004611 ORTHO05D005794 9.0e-20 100.9 144 40.3
arahy.Tifrunner.gnm1.ann1.0CQZ6Z Arachis hypogaea HOM05D000862 ORTHO05D000003 1.7e-18 96.7 75 65.3
arahy.Tifrunner.gnm1.ann1.R4H24K Arachis hypogaea HOM05D000862 ORTHO05D000003 5.0e-18 95.1 75 64.0
COL.COLO4_13521 Corchorus olitorius HOM05D004611 ORTHO05D005794 5.0e-18 95.1 91 58.2


User provided reference genes

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