Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17538 Sequoiadendron giganteum HOM05D006010 ORTHO05D007381 6.3e-172 607.4 329 100.0
Sc22g0001300 Simmondsia chinensis HOM05D006010 ORTHO05D007381 5.5e-35 152.5 264 40.9
Cc02_g11480 Coffea canephora HOM05D006010 ORTHO05D007381 7.2e-35 152.1 262 41.6
TWI53G0527 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 1.6e-34 151.0 262 40.1
Lsat_1_v5_gn_3_65880 Lactuca sativa HOM05D006010 ORTHO05D007381 2.1e-34 150.6 231 45.5
Potri.017G135500 Populus trichocarpa HOM05D006010 ORTHO05D007381 4.0e-33 146.4 247 40.1
CAN.G222.64 Capsicum annuum HOM05D006010 ORTHO05D007381 8.9e-33 145.2 232 42.2
PGSC0003DMG400013242 Solanum tuberosum HOM05D006010 ORTHO05D007381 3.4e-32 143.3 232 41.4
EL10Ac3g05516 Beta vulgaris HOM05D006010 ORTHO05D007381 5.7e-32 142.5 265 41.5
Hma1.2p1_0249F.1_g102390 Hydrangea macrophylla HOM05D006010 ORTHO05D007381 5.7e-32 142.5 262 39.3
TAR623G0083 Trochodendron aralioides HOM05D006010 ORTHO05D007381 5.7e-32 142.5 261 39.5
GSVIVG01015997001 Vitis vinifera HOM05D006010 ORTHO05D007381 5.7e-32 142.5 254 40.2
Sopen11g006280 Solanum pennellii HOM05D006010 ORTHO05D007381 1.3e-31 141.4 231 41.6
Actinidia35721 Actinidia chinensis HOM05D006010 ORTHO05D007381 2.8e-31 140.2 236 41.9
Peaxi162Scf00464g00430 Petunia axillaris HOM05D006010 ORTHO05D007381 2.8e-31 140.2 231 42.4
HanXRQChr15g0482991 Helianthus annuus HOM05D006010 ORTHO05D007381 3.7e-31 139.8 232 44.4
Solyc11g011490.2 Solanum lycopersicum HOM05D006010 ORTHO05D007381 4.9e-31 139.4 230 41.3
Lj2A517G41 Lonicera japonica HOM05D006010 ORTHO05D007381 1.1e-30 138.3 234 39.7
MSTRG.15654 Avicennia marina HOM05D006010 ORTHO05D007381 3.1e-30 136.7 233 39.5
Nn3g17023 Nelumbo nucifera HOM05D006010 ORTHO05D007381 3.1e-30 136.7 253 40.3
Hund11982 Selenicereus undatus HOM05D006010 ORTHO05D007381 3.1e-30 136.7 229 42.4
arahy.Tifrunner.gnm1.ann1.ZG5C6W Arachis hypogaea HOM05D006010 ORTHO05D007381 7.0e-30 135.6 223 42.2
Sabra17G0114300 Salix brachista HOM05D006010 ORTHO05D007381 7.0e-30 135.6 277 36.5
arahy.Tifrunner.gnm1.ann1.RW4QB8 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.2e-29 134.8 234 43.2
Atru.chr11.39 Acer truncatum HOM05D006010 ORTHO05D007381 2.0e-29 134.0 225 41.3
Ciclev10026000m.g Citrus clementina HOM05D006010 ORTHO05D007381 2.7e-29 133.7 256 39.5
Glyma.16G168300 Glycine max HOM05D006010 ORTHO05D007381 3.5e-29 133.3 236 41.9
Sabra17G0111300 Salix brachista HOM05D006010 ORTHO05D007381 3.5e-29 133.3 277 36.1
AUR62016215 Chenopodium quinoa HOM05D006010 ORTHO05D007381 5.9e-29 132.5 261 37.9
arahy.Tifrunner.gnm1.ann1.14A9Q3 Arachis hypogaea HOM05D006010 ORTHO05D007381 1.0e-28 131.7 237 40.1
AUR62039273 Chenopodium quinoa HOM05D006010 ORTHO05D007381 1.0e-28 131.7 265 38.1
Ca_05962_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 1.3e-28 131.3 231 39.8
Duzib235G0102 Durio zibethinus HOM05D006010 ORTHO05D007381 1.3e-28 131.3 231 40.3
ECA236G4224 Erigeron canadensis HOM05D006010 ORTHO05D007381 1.3e-28 131.3 252 40.1
Lalb_Chr10g0104261 Lupinus albus HOM05D006010 ORTHO05D007381 2.3e-28 130.6 235 41.3
SalBow1G7757 Salvia bowleyana HOM05D006010 ORTHO05D007381 2.9e-28 130.2 240 39.2
MD02G1273300 Malus domestica HOM05D006010 ORTHO05D007381 5.0e-28 129.4 236 39.0
RcHm_v2.0_Chr3g0492111 Rosa chinensis HOM05D006010 ORTHO05D007381 5.0e-28 129.4 235 40.0
Medtr5g077800 Medicago truncatula HOM05D006010 ORTHO05D007381 6.6e-28 129.0 232 42.2
CiPaw.03G074500 Carya illinoinensis HOM05D006010 ORTHO05D007381 8.6e-28 128.6 240 42.1
PGR004G1862 Punica granatum HOM05D006010 ORTHO05D007381 8.6e-28 128.6 239 41.4
Psat2g045640 Pisum sativum HOM05D006010 ORTHO05D007381 1.1e-27 128.3 233 40.8
vmacro20589 Vaccinium macrocarpon HOM05D006010 ORTHO05D007381 1.9e-27 127.5 237 41.4
Rhsim10G0180400 Rhododendron simsii HOM05D006010 ORTHO05D007381 2.5e-27 127.1 237 41.4
Phvul.004G098200 Phaseolus vulgaris HOM05D006010 ORTHO05D007381 5.6e-27 125.9 236 43.2
Lj4g0009716 Lotus japonicus HOM05D006010 ORTHO05D007381 7.3e-27 125.6 231 40.7
Prupe.2G048000 Prunus persica HOM05D006010 ORTHO05D007381 7.3e-27 125.6 236 39.8
QL12p000853 Quercus lobata HOM05D006010 ORTHO05D007381 1.2e-26 124.8 279 37.3
Glyma.02G082600 Glycine max HOM05D006010 ORTHO05D007381 2.1e-26 124.0 236 41.1
SGA_v2.0_scaffold115G32097 Striga asiatica HOM05D006010 ORTHO05D007381 2.1e-26 124.0 260 36.9
Haze_14288 Corylus avellana HOM05D006010 ORTHO05D007381 3.6e-26 123.2 236 41.9
Sed0003139 Sechium edule HOM05D006010 ORTHO05D007381 4.7e-26 122.9 236 39.0
Migut.K00936 Erythranthe guttata HOM05D006010 ORTHO05D007381 6.1e-26 122.5 234 37.6
PSO478G0898 Papaver somniferum HOM05D006010 ORTHO05D007381 8.0e-26 122.1 257 36.2
CsaV3_2G017210 Cucumis sativus L. HOM05D006010 ORTHO05D007381 1.0e-25 121.7 236 39.0
DCAR_014157 Daucus carota HOM05D006010 ORTHO05D007381 1.0e-25 121.7 223 40.4
unitig_0.g1692 Utricularia gibba HOM05D006010 ORTHO05D007381 1.0e-25 121.7 270 37.0
FAN19G0427 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.4e-25 121.3 230 37.8
FvH4_1g30030 Fragaria vesca HOM05D006010 ORTHO05D007381 1.8e-25 120.9 230 37.4
FAN28G1345 Fragaria x ananassa HOM05D006010 ORTHO05D007381 2.3e-25 120.6 231 37.2
MELO3C020924.2 Cucumis melo HOM05D006010 ORTHO05D007381 3.1e-25 120.2 224 39.7
Oeu048940.2 Olea europaea HOM05D006010 ORTHO05D007381 4.0e-25 119.8 266 38.0
Cfa007784 Carpinus fangiana HOM05D006010 ORTHO05D007381 5.2e-25 119.4 232 42.2
Sed0022983 Sechium edule HOM05D006010 ORTHO05D007381 6.8e-25 119.0 224 39.7
FAN23G2851 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.2e-24 118.2 237 39.2
Eucgr.F02881 Eucalyptus grandis HOM05D006010 ORTHO05D007381 1.5e-24 117.9 238 37.4
PSO017G1892 Papaver somniferum HOM05D006010 ORTHO05D007381 4.4e-24 116.3 258 36.0
ClCG05G010670 Citrullus lanatus HOM05D006010 ORTHO05D007381 5.8e-24 115.9 226 38.1
FAN28G0351 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.7e-23 114.4 244 37.3
Mapoly0044s0136 Marchantia polymorpha HOM05D006010 ORTHO05D007381 2.2e-23 114.0 222 40.5
Zm00001eb291600 Zea mays HOM05D006010 ORTHO05D007381 3.7e-23 113.2 256 38.7
TPR.G23699 Trifolium pratense HOM05D005584 ORTHO05D006809 1.1e-22 111.7 202 39.6
VMungo0464G0699 Vigna mungo HOM05D006010 ORTHO05D007381 1.1e-22 111.7 206 41.7
Os05g0495100 Oryza sativa ssp. japonica HOM05D006010 ORTHO05D007381 1.4e-22 111.3 273 34.8
Thecc.06G019600 Theobroma cacao HOM05D006010 ORTHO05D007381 3.2e-22 110.2 221 38.0
TPR.G23647 Trifolium pratense HOM05D006010 ORTHO05D007381 3.2e-22 110.2 202 38.6
Cpa.g.sc116.81 Carica papaya HOM05D006010 ORTHO05D007381 5.4e-22 109.4 219 39.7
Actinidia28796 Actinidia chinensis HOM05D006010 ORTHO05D007381 9.2e-22 108.6 211 38.4
AagrBONN_evm.TU.Sc2ySwM_369.381 Anthoceros agrestis HOM05D006010 ORTHO05D007381 1.6e-21 107.8 235 37.9
CDE09G0547 Ceratophyllum demersum HOM05D006010 ORTHO05D007381 2.0e-21 107.5 275 34.5
THA.LOC104827184 Tarenaya hassleriana HOM05D006010 ORTHO05D007381 2.0e-21 107.5 219 37.9
ATR0320G008 Amborella trichopoda HOM05D006010 ORTHO05D007381 2.3e-20 104.0 128 50.8
Thhalv10021193m.g Eutrema salsugineum HOM05D006010 ORTHO05D007381 3.9e-20 103.2 224 37.9
C09p75990 Brassica napus HOM05D006010 ORTHO05D007381 6.6e-20 102.4 210 38.1
BolC5t35058H Brassica oleracea HOM05D006010 ORTHO05D007381 6.6e-20 102.4 210 38.1
Ah.05g176710 Amaranthus hybridus HOM05D006010 ORTHO05D007381 8.6e-20 102.1 250 34.8
CSS0039891 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 8.6e-20 102.1 132 48.5
Carub.0003s0196 Capsella rubella HOM05D006010 ORTHO05D007381 4.3e-19 99.8 152 44.7
BraA06t23281Z Brassica rapa HOM05D000919 ORTHO05D004442 7.3e-19 99.0 211 36.0
A05p44250 Brassica napus HOM05D006010 ORTHO05D007381 9.5e-19 98.6 210 36.2
Ca_05839_v3 Cicer arietinum L. HOM05D006010 ORTHO05D007381 2.1e-18 97.4 128 46.9
Gorai.011G090700 Gossypium raimondii HOM05D006010 ORTHO05D007381 2.1e-18 97.4 242 34.7
MD07G1042200 Malus domestica HOM05D006010 ORTHO05D007381 2.1e-18 97.4 237 35.4
COL.COLO4_31121 Corchorus olitorius HOM05D006010 ORTHO05D007381 2.8e-18 97.1 225 35.6
AT3G02860 Arabidopsis thaliana HOM05D006010 ORTHO05D007381 3.6e-18 96.7 235 37.0
CANSAT01G2297 Cannabis sativa HOM05D006010 ORTHO05D007381 1.1e-17 95.1 260 33.8
Gohir.D10G083400 Gossypium hirsutum HOM05D006010 ORTHO05D007381 1.1e-17 95.1 242 34.3
Sp3g01890 Schrenkiella parvula HOM05D006010 ORTHO05D007381 1.1e-17 95.1 233 36.9
AL3G12280 Arabidopsis lyrata HOM05D006010 ORTHO05D007381 2.3e-17 94.0 225 36.0
GSVIVG01015998001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.3e-17 94.0 191 35.1
Gohir.A10G157800 Gossypium hirsutum HOM05D006010 ORTHO05D007381 6.8e-17 92.4 218 34.4
BcaC05g30500 Brassica carinata HOM05D000919 ORTHO05D004442 8.9e-17 92.0 211 35.5
Sed0026765 Sechium edule HOM05D006010 ORTHO05D007381 3.4e-16 90.1 224 33.9
Aa31LG5G13330 Aethionema arabicum HOM05D006010 ORTHO05D007381 1.7e-15 87.8 213 33.3
CARHR076870 Cardamine hirsuta HOM05D006010 ORTHO05D007381 1.7e-15 87.8 229 34.9
Sed0018686 Sechium edule HOM05D006010 ORTHO05D007381 1.6e-13 81.3 65 61.5
Sed0023512 Sechium edule HOM05D006010 ORTHO05D007381 2.1e-13 80.9 63 63.5
GSVIVG01016036001 Vitis vinifera HOM05D006010 ORTHO05D007381 2.7e-13 80.5 67 61.2
TWI74G0222 Tripterygium wilfordii HOM05D006010 ORTHO05D007381 6.2e-10 69.3 174 36.8
FAN26G2228 Fragaria x ananassa HOM05D006010 ORTHO05D007381 1.8e-09 67.8 186 29.6
SHI30124 Sapria himalayana HOM05D006010 ORTHO05D007381 2.3e-09 67.4 114 38.6
GSVIVG01016007001 Vitis vinifera HOM05D006010 ORTHO05D007381 1.2e-08 65.1 178 30.9
ATR0320G006 Amborella trichopoda HOM05D006010 ORTHO05D007381 1.5e-08 64.7 119 38.7
CSS0015748 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.7e-07 60.1 73 45.2
CSS0044039 Camellia sinensis var. sinensis HOM05D006010 ORTHO05D007381 3.7e-07 60.1 73 45.2


User provided reference genes

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