Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_17476 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 5.2e-287 990.3 494 100.0
SEGI_28473 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 2.4e-231 805.4 447 91.3
SEGI_15297 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 4.9e-221 771.2 447 87.7
Ciclev10000458m.g Citrus clementina HOM05D003682 ORTHO05D004224 5.5e-79 299.3 436 43.1
Ca_16009_v3 Cicer arietinum L. HOM05D003682 ORTHO05D004224 1.8e-74 284.3 428 43.0
Potri.006G225100 Populus trichocarpa HOM05D003682 ORTHO05D004224 3.1e-74 283.5 439 41.0
Lj1g0007093 Lotus japonicus HOM05D003682 ORTHO05D004224 2.0e-73 280.8 428 41.4
MBI16_g12477_MAGBIO Magnolia biondii HOM05D003682 ORTHO05D004224 2.0e-73 280.8 428 41.4
ATR0767G054 Amborella trichopoda HOM05D003682 ORTHO05D004224 5.0e-72 276.2 427 40.5
Thecc.08G072000 Theobroma cacao HOM05D003682 ORTHO05D004224 5.0e-72 276.2 431 42.7
MD08G1200000 Malus domestica HOM05D003682 ORTHO05D004224 7.2e-71 272.3 432 40.3
Cfa003049 Carpinus fangiana HOM05D003682 ORTHO05D004224 1.6e-70 271.2 437 41.9
Sabra06G0174000 Salix brachista HOM05D003682 ORTHO05D004224 1.6e-70 271.2 440 40.0
CANSAT80G0637 Cannabis sativa HOM05D003682 ORTHO05D004224 2.7e-70 270.4 445 40.2
TWI38G0994 Tripterygium wilfordii HOM05D003682 ORTHO05D004224 3.0e-69 266.9 427 41.5
arahy.Tifrunner.gnm1.ann1.X4VYGK Arachis hypogaea HOM05D003682 ORTHO05D004224 6.7e-69 265.8 429 41.0
AUR62037113 Chenopodium quinoa HOM05D003682 ORTHO05D004224 6.7e-69 265.8 442 40.3
ClCG11G014620 Citrullus lanatus HOM05D003682 ORTHO05D004224 6.7e-69 265.8 438 40.2
FAN08G1971 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.5e-68 264.6 430 40.7
Rhsim07G0212400 Rhododendron simsii HOM05D003682 ORTHO05D004224 5.7e-68 262.7 429 40.1
FAN18G1070 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.3e-67 261.5 431 39.9
Gohir.A05G405400 Gossypium hirsutum HOM05D003682 ORTHO05D004224 3.7e-67 260.0 427 40.5
Sed0002040 Sechium edule HOM05D003682 ORTHO05D004224 1.4e-66 258.1 427 40.3
Manes.05G189900 Manihot esculenta HOM05D003682 ORTHO05D004224 4.1e-66 256.5 441 39.7
arahy.Tifrunner.gnm1.ann1.6QC2QS Arachis hypogaea HOM05D003682 ORTHO05D004224 5.3e-66 256.1 429 40.1
Medtr3g100110 Medicago truncatula HOM05D003682 ORTHO05D004224 1.6e-65 254.6 439 39.9
VMungo1309G2518 Vigna mungo HOM05D003682 ORTHO05D004224 1.6e-65 254.6 427 41.7
Phvul.009G036000 Phaseolus vulgaris HOM05D003682 ORTHO05D004224 2.7e-65 253.8 427 40.3
RcHm_v2.0_Chr7g0236311 Rosa chinensis HOM05D003682 ORTHO05D004224 2.7e-65 253.8 431 40.1
Lj4A739G25 Lonicera japonica HOM05D003682 ORTHO05D004224 3.5e-65 253.4 429 39.9
Gorai.012G012000 Gossypium raimondii HOM05D003682 ORTHO05D004224 5.9e-65 252.7 427 40.0
QL09p017991 Quercus lobata HOM05D003682 ORTHO05D004224 5.9e-65 252.7 442 41.2
PSO170G3281 Papaver somniferum HOM05D003682 ORTHO05D004224 7.7e-65 252.3 424 38.0
Gohir.D04G010200 Gossypium hirsutum HOM05D003682 ORTHO05D004224 1.0e-64 251.9 431 40.8
PSO782G3450 Papaver somniferum HOM05D003682 ORTHO05D004224 1.0e-64 251.9 425 38.6
CsaV3_6G052200 Cucumis sativus L. HOM05D003682 ORTHO05D004224 2.9e-64 250.4 433 38.6
vmacro04646 Vaccinium macrocarpon HOM05D003682 ORTHO05D004224 2.9e-64 250.4 429 39.6
FAN13G2001 Fragaria x ananassa HOM05D003682 ORTHO05D004224 3.8e-64 250.0 454 37.9
Gohir.A06G031900 Gossypium hirsutum HOM05D003682 ORTHO05D004224 3.8e-64 250.0 426 39.7
TAR381G0824 Trochodendron aralioides HOM05D003682 ORTHO05D004224 3.8e-64 250.0 435 38.2
Solyc04g076430.3 Solanum lycopersicum HOM05D003682 ORTHO05D004224 6.5e-64 249.2 431 38.7
TPR.G6373 Trifolium pratense HOM05D003682 ORTHO05D004224 1.9e-63 247.7 451 38.6
Gohir.D06G031000 Gossypium hirsutum HOM05D003682 ORTHO05D004224 3.2e-63 246.9 427 39.6
Glyma.04G095800 Glycine max HOM05D003682 ORTHO05D004224 4.2e-63 246.5 427 38.9
Gorai.010G034200 Gossypium raimondii HOM05D003682 ORTHO05D004224 7.2e-63 245.7 427 39.1
Nitab4.5_0000131g0160 Nicotiana tabacum HOM05D003682 ORTHO05D004224 3.6e-62 243.4 434 36.9
TAR625G0645 Trochodendron aralioides HOM05D003682 ORTHO05D004224 1.0e-61 241.9 428 38.8
FvH4_5g35190 Fragaria vesca HOM05D003682 ORTHO05D004224 1.4e-61 241.5 431 38.3
Glyma.06G097500 Glycine max HOM05D003682 ORTHO05D004224 1.4e-61 241.5 445 38.4
BolC7t45853H Brassica oleracea HOM05D003682 ORTHO05D004224 1.8e-61 241.1 426 36.6
Eucgr.F00427 Eucalyptus grandis HOM05D003682 ORTHO05D004224 2.3e-61 240.7 434 39.2
Sp7g22480 Schrenkiella parvula HOM05D003682 ORTHO05D004224 2.3e-61 240.7 430 37.0
EL10Ac6g13977 Beta vulgaris HOM05D003682 ORTHO05D004224 4.0e-61 240.0 477 35.8
Peaxi162Scf00454g00225 Petunia axillaris HOM05D003682 ORTHO05D004224 4.0e-61 240.0 428 38.6
Carub.0007s1658 Capsella rubella HOM05D003682 ORTHO05D004224 5.2e-61 239.6 426 37.3
Lj4A600T32 Lonicera japonica HOM05D003682 ORTHO05D004224 5.2e-61 239.6 426 39.0
AUR62042881 Chenopodium quinoa HOM05D003682 ORTHO05D004224 6.8e-61 239.2 430 38.6
Psat7g218480 Pisum sativum HOM05D003682 ORTHO05D004224 1.2e-60 238.4 426 38.5
Aqoxy5G01369 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 1.5e-60 238.0 448 36.2
Duzib093G1710 Durio zibethinus HOM05D003682 ORTHO05D004224 1.5e-60 238.0 441 39.0
Sed0007462 Sechium edule HOM05D003682 ORTHO05D004224 1.5e-60 238.0 439 38.0
CiPaw.08G056300 Carya illinoinensis HOM05D003682 ORTHO05D004224 2.6e-60 237.3 438 38.6
Actinidia19624 Actinidia chinensis HOM05D003682 ORTHO05D004224 5.7e-60 236.1 434 38.2
CAN.G475.14 Capsicum annuum HOM05D003682 ORTHO05D004224 1.3e-59 235.0 429 37.5
Prupe.1G533400 Prunus persica HOM05D003682 ORTHO05D004224 1.3e-59 235.0 448 36.2
Actinidia29628 Actinidia chinensis HOM05D003682 ORTHO05D004224 2.8e-59 233.8 427 37.7
Sc26g0002240 Simmondsia chinensis HOM05D003682 ORTHO05D004224 2.8e-59 233.8 355 41.7
Lalb_Chr17g0344591 Lupinus albus HOM05D003682 ORTHO05D004224 4.1e-58 229.9 431 36.9
PGSC0003DMG400009355 Solanum tuberosum HOM05D003682 ORTHO05D004224 5.4e-58 229.6 435 36.8
Haze_22471 Corylus avellana HOM05D003682 ORTHO05D004224 9.1e-58 228.8 437 38.9
AL7G28730 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 2.7e-57 227.3 426 35.7
BcaC06g32881 Brassica carinata HOM05D003682 ORTHO05D004224 2.7e-57 227.3 425 35.5
C07p53610 Brassica napus HOM05D003682 ORTHO05D004224 3.5e-57 226.9 425 36.0
Oeu060952.2 Olea europaea HOM05D003682 ORTHO05D004224 3.5e-57 226.9 432 35.6
Aa31LG4G9590 Aethionema arabicum HOM05D003682 ORTHO05D004224 7.7e-57 225.7 428 35.7
BraA01t01520Z Brassica rapa HOM05D003682 ORTHO05D004224 1.0e-56 225.3 423 35.9
MELO3C007092.2 Cucumis melo HOM05D003682 ORTHO05D004224 1.0e-56 225.3 456 35.5
Lj4A589T43 Lonicera japonica HOM05D003682 ORTHO05D004224 8.6e-56 222.2 426 36.6
Migut.D00421 Erythranthe guttata HOM05D003682 ORTHO05D004224 1.1e-55 221.9 426 35.4
DCAR_019320 Daucus carota HOM05D003682 ORTHO05D004224 2.5e-55 220.7 431 36.4
Nitab4.5_0006151g0030 Nicotiana tabacum HOM05D003682 ORTHO05D004224 2.5e-55 220.7 433 35.1
Cc10_g15970 Coffea canephora HOM05D003682 ORTHO05D004224 3.3e-55 220.3 427 34.9
Os06g0677500 Oryza sativa ssp. japonica HOM05D003682 ORTHO05D004224 1.6e-54 218.0 431 36.2
Thhalv10024594m.g Eutrema salsugineum HOM05D003682 ORTHO05D004224 2.8e-54 217.2 425 35.1
AL3G20810 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 4.7e-54 216.5 432 35.9
ECA246G3230 Erigeron canadensis HOM05D003682 ORTHO05D004224 4.7e-54 216.5 431 36.0
A01p15860 Brassica napus HOM05D003682 ORTHO05D004224 8.0e-54 215.7 423 35.0
AL7G47420 Arabidopsis lyrata HOM05D003682 ORTHO05D004224 1.4e-53 214.9 435 37.0
BraA03t14591Z Brassica rapa HOM05D003682 ORTHO05D004224 1.4e-53 214.9 429 34.5
PGR042G1797 Punica granatum HOM05D003682 ORTHO05D004224 2.3e-53 214.2 429 36.1
Zm00001eb224710 Zea mays HOM05D003682 ORTHO05D004224 2.3e-53 214.2 429 34.7
Carub.0003s1254 Capsella rubella HOM05D003682 ORTHO05D004224 5.2e-53 213.0 432 35.2
A03p55320 Brassica napus HOM05D003682 ORTHO05D004224 6.8e-53 212.6 425 34.4
Mapoly0151s0003 Marchantia polymorpha HOM05D003682 ORTHO05D004224 1.2e-52 211.8 453 34.0
BolC1t01908H Brassica oleracea HOM05D003682 ORTHO05D004224 1.5e-52 211.5 431 34.3
C01p19800 Brassica napus HOM05D003682 ORTHO05D004224 2.0e-52 211.1 431 34.1
Lsat_1_v5_gn_6_106460 Lactuca sativa HOM05D003682 ORTHO05D004224 2.6e-52 210.7 427 34.7
SGA_v2.0_scaffold1G00611 Striga asiatica HOM05D003682 ORTHO05D004224 2.6e-52 210.7 420 34.5
Sopen04g030190 Solanum pennellii HOM05D003682 ORTHO05D004224 3.4e-52 210.3 443 35.4
HanXRQChr10g0277791 Helianthus annuus HOM05D003682 ORTHO05D004224 4.4e-52 209.9 423 34.8
Zm00001eb273870 Zea mays HOM05D003682 ORTHO05D004224 7.5e-52 209.1 429 33.6
AT4G24490 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 2.8e-51 207.2 430 35.1
HPP92_013453 Vanilla planifolia HOM05D003682 ORTHO05D004224 2.8e-51 207.2 430 33.7
THA.LOC104804716 Tarenaya hassleriana HOM05D003682 ORTHO05D000002 3.1e-50 203.8 430 34.4
AT5G41820 Arabidopsis thaliana HOM05D003682 ORTHO05D004224 1.2e-49 201.8 432 35.0
GSVIVG01009191001 Vitis vinifera HOM05D003682 ORTHO05D004224 1.6e-49 201.4 282 43.3
CARHR231880 Cardamine hirsuta HOM05D003682 ORTHO05D004224 3.9e-48 196.8 431 34.3
Glyma.02G123302 Glycine max HOM05D003682 ORTHO05D004224 6.6e-48 196.1 311 40.2
Nn5g27243 Nelumbo nucifera HOM05D003682 ORTHO05D004224 1.5e-47 194.9 354 37.0
Hund17277 Selenicereus undatus HOM05D003682 ORTHO05D004224 4.7e-46 189.9 351 38.2
Oeu025829.1 Olea europaea HOM05D003682 ORTHO05D004224 8.0e-46 189.1 353 36.8
CDE02G0915 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 1.0e-45 188.7 274 42.3
SHI09562 Sapria himalayana HOM05D003682 ORTHO05D000023 3.1e-45 187.2 435 34.0
Dinv44868 Davidia involucrata HOM05D003682 ORTHO05D004224 2.0e-44 184.5 355 36.9
FAN04G1105 Fragaria x ananassa HOM05D003682 ORTHO05D004224 1.4e-42 178.3 426 32.9
CDE01G0832 Ceratophyllum demersum HOM05D003682 ORTHO05D004224 3.9e-40 170.2 382 34.0
CSS0003141 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 9.5e-39 165.6 429 31.7
ECA232G1558 Erigeron canadensis HOM05D003682 ORTHO05D004224 2.3e-37 161.0 255 41.6
BcaC09g50863 Brassica carinata HOM05D003682 ORTHO05D004224 1.7e-35 154.8 304 35.2
unitig_0.g155 Utricularia gibba HOM05D003682 ORTHO05D004224 5.2e-29 133.3 277 34.7
Cpa.g.c39765 Carica papaya HOM05D003682 ORTHO05D004224 5.8e-28 129.8 208 39.9
SalBow4G1793 Salvia bowleyana HOM05D003682 ORTHO05D004224 1.3e-27 128.6 160 43.8
CBR_g19613 Chara braunii HOM05D003682 ORTHO05D004224 4.9e-27 126.7 207 40.6
HPP92_013470 Vanilla planifolia HOM05D003682 ORTHO05D004224 4.1e-26 123.6 204 37.7
MD15G1387100 Malus domestica HOM05D003682 ORTHO05D004224 2.1e-25 121.3 258 34.1
Actinidia36899 Actinidia chinensis HOM05D003682 ORTHO05D004224 3.6e-22 110.5 135 45.2
SalBow4G2331 Salvia bowleyana HOM05D003682 ORTHO05D004224 8.1e-22 109.4 238 34.9
COL.COLO4_35257 Corchorus olitorius HOM05D003682 ORTHO05D004224 3.4e-20 104.0 126 49.2
BcaNung05639 Brassica carinata HOM05D006679 ORTHO05D008461 4.4e-20 103.6 131 42.0
Aqoxy2G00859 Aquilegia oxysepala HOM05D003682 ORTHO05D004224 5.8e-20 103.2 121 47.1
HanXRQChr08g0233481 Helianthus annuus HOM05D003682 ORTHO05D004224 9.9e-20 102.4 138 43.5
CSS0030960 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.3e-19 102.1 242 33.1
AagrBONN_evm.TU.Sc2ySwM_117.1254 Anthoceros agrestis HOM05D003682 ORTHO05D004224 1.9e-18 98.2 142 42.3
Lalb_Chr04g0252781 Lupinus albus HOM05D003682 ORTHO05D004224 1.2e-17 95.5 71 63.4
CSS0029858 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.6e-17 95.1 237 30.4
Pp3c1_10430 Physcomitrium patens HOM05D003682 ORTHO05D004224 6.0e-17 93.2 463 25.1
Atru.chr13.999 Acer truncatum HOM05D003682 ORTHO05D004224 8.7e-16 89.4 193 38.9
CSS0013415 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 1.4e-13 82.0 236 29.7
Psat5g049320 Pisum sativum HOM05D003682 ORTHO05D004224 1.2e-12 79.0 157 36.3
CSS0003380 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.6e-12 77.8 105 43.8
CSS0026243 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.6e-12 77.8 105 42.9
CSS0040590 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 2.6e-12 77.8 105 42.9
CSS0014234 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.8e-11 73.9 105 41.9
Dinv42603 Davidia involucrata HOM05D003682 ORTHO05D004224 1.1e-10 72.4 104 39.4
CSS0042448 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.2e-10 70.9 105 41.0
CSS0000677 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.9e-08 63.9 105 40.0
CSS0006921 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 6.6e-08 63.2 105 38.1
Prupe.1G572600 Prunus persica HOM05D003682 ORTHO05D004224 6.6e-08 63.2 178 30.3
PGR102G2117 Punica granatum HOM05D003682 ORTHO05D004224 6.6e-08 63.2 295 28.1
CSS0029231 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 3.3e-07 60.8 105 40.0
CSS0020196 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 6.2e-06 56.6 44 65.9
CSS0029499 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 6.2e-06 56.6 44 65.9
CSS0037747 Camellia sinensis var. sinensis HOM05D003682 ORTHO05D004224 6.2e-06 56.6 44 65.9


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