Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14757 Sequoiadendron giganteum HOM05D002781 ORTHO05D003382 1.2e-71 273.1 141 100.0
SEGI_02968 Sequoiadendron giganteum HOM05D002781 ORTHO05D003382 2.0e-34 149.4 94 80.9
SEGI_10721 Sequoiadendron giganteum HOM05D002781 ORTHO05D003382 2.9e-25 119.0 72 81.9
ATR0665G037 Amborella trichopoda HOM05D002781 ORTHO05D003382 5.9e-18 94.7 100 50.0
CSS0008198 Camellia sinensis var. sinensis HOM05D002781 ORTHO05D003382 1.3e-17 93.6 101 48.5
ATR0626G153 Amborella trichopoda HOM05D002781 ORTHO05D003382 3.8e-17 92.0 100 48.0
CSS0028741 Camellia sinensis var. sinensis HOM05D002781 ORTHO05D003382 2.5e-16 89.4 93 49.5
Nn4g24942 Nelumbo nucifera HOM05D002781 ORTHO05D003382 4.2e-16 88.6 102 47.1
TAR626G1626 Trochodendron aralioides HOM05D002781 ORTHO05D003382 7.2e-16 87.8 71 57.7
CSS0040336 Camellia sinensis var. sinensis HOM05D002781 ORTHO05D003382 9.4e-16 87.4 79 54.4
Oeu014115.1 Olea europaea HOM05D002781 ORTHO05D003382 9.4e-16 87.4 106 44.3
TAR383G0197 Trochodendron aralioides HOM05D002781 ORTHO05D003382 6.1e-15 84.7 71 56.3
SGA_v2.0_scaffold17G08116 Striga asiatica HOM05D002781 ORTHO05D003382 7.9e-15 84.3 99 46.5
DCAR_027376 Daucus carota HOM05D002781 ORTHO05D003382 1.8e-14 83.2 109 42.2
HanXRQChr11g0342691 Helianthus annuus HOM05D002781 ORTHO05D003382 1.8e-14 83.2 74 52.7
Aqoxy7G02657 Aquilegia oxysepala HOM05D002781 ORTHO05D003382 2.3e-14 82.8 77 51.9
Lsat_1_v5_gn_1_72341 Lactuca sativa HOM05D002781 ORTHO05D003382 3.0e-14 82.4 74 52.7
Oeu019276.1 Olea europaea HOM05D002781 ORTHO05D003382 3.9e-14 82.0 129 39.5
Oeu039634.1 Olea europaea HOM05D002781 ORTHO05D003382 3.9e-14 82.0 129 39.5
unitig_0.g2193 Utricularia gibba HOM05D002781 ORTHO05D003382 3.9e-14 82.0 75 53.3
vmacro05095 Vaccinium macrocarpon HOM05D002781 ORTHO05D003382 3.9e-14 82.0 68 55.9
CDE02G0432 Ceratophyllum demersum HOM05D002781 ORTHO05D003382 5.2e-14 81.6 111 40.5
Dinv09454 Davidia involucrata HOM05D002781 ORTHO05D003382 5.2e-14 81.6 80 47.5
Lj6A614T28 Lonicera japonica HOM05D002781 ORTHO05D003382 6.7e-14 81.3 74 50.0
Rhsim07G0171600 Rhododendron simsii HOM05D002781 ORTHO05D003382 6.7e-14 81.3 80 48.8
unitig_747.g21377 Utricularia gibba HOM05D002781 ORTHO05D003382 1.1e-13 80.5 75 50.7
CiPaw.07G216300 Carya illinoinensis HOM05D002781 ORTHO05D003382 1.5e-13 80.1 82 52.4
vmacro05094 Vaccinium macrocarpon HOM05D002781 ORTHO05D003382 1.5e-13 80.1 97 44.3
arahy.Tifrunner.gnm1.ann1.FW1LZ6 Arachis hypogaea HOM05D002781 ORTHO05D003382 2.6e-13 79.3 88 48.9
CAN.G1921.4 Capsicum annuum HOM05D002781 ORTHO05D003382 2.6e-13 79.3 75 50.7
Rhsim07G0113300 Rhododendron simsii HOM05D002781 ORTHO05D003382 2.6e-13 79.3 75 50.7
Rhsim07G0113700 Rhododendron simsii HOM05D002781 ORTHO05D003382 2.6e-13 79.3 75 50.7
arahy.Tifrunner.gnm1.ann1.478ZG4 Arachis hypogaea HOM05D002781 ORTHO05D003382 3.3e-13 79.0 91 46.2
EL10Ac3g06163 Beta vulgaris HOM05D002781 ORTHO05D003382 3.3e-13 79.0 69 55.1
Thecc.09G000700 Theobroma cacao HOM05D002781 ORTHO05D003382 3.3e-13 79.0 114 41.2
MELO3C003651.2 Cucumis melo HOM05D002781 ORTHO05D003382 4.4e-13 78.6 92 47.8
Nn8g41173 Nelumbo nucifera HOM05D002781 ORTHO05D003382 5.7e-13 78.2 102 41.2
SGA_v2.0_scaffold20G09307 Striga asiatica HOM05D002781 ORTHO05D003382 7.4e-13 77.8 70 54.3
CsaV3_3G046850 Cucumis sativus L. HOM05D002781 ORTHO05D003382 9.7e-13 77.4 81 50.6
Hma1.2p1_1470F.1_g285580 Hydrangea macrophylla HOM05D002781 ORTHO05D003382 9.7e-13 77.4 74 50.0
ECA248G0538 Erigeron canadensis HOM05D002781 ORTHO05D003382 1.3e-12 77.0 69 55.1
Actinidia25730 Actinidia chinensis HOM05D002781 ORTHO05D003382 1.7e-12 76.6 71 50.7
Lsat_1_v5_gn_5_33240 Lactuca sativa HOM05D002781 ORTHO05D003382 1.7e-12 76.6 74 47.3
AagrBONN_evm.TU.Sc2ySwM_228.801 Anthoceros agrestis HOM05D002781 ORTHO05D003382 2.8e-12 75.9 82 46.3
arahy.Tifrunner.gnm1.ann1.V530VD Arachis hypogaea HOM05D002781 ORTHO05D003382 2.8e-12 75.9 93 45.2
PGR044G1761 Punica granatum HOM05D002781 ORTHO05D003382 2.8e-12 75.9 105 42.9
Solyc05g056250.3 Solanum lycopersicum HOM05D002781 ORTHO05D003382 2.8e-12 75.9 106 38.7
MSTRG.13933 Avicennia marina HOM05D002781 ORTHO05D003382 3.7e-12 75.5 132 38.6
Sopen05g034640 Solanum pennellii HOM05D002781 ORTHO05D003382 3.7e-12 75.5 106 38.7
SalBow1G0367 Salvia bowleyana HOM05D002781 ORTHO05D003382 4.8e-12 75.1 111 42.3
SalBow1G1421 Salvia bowleyana HOM05D002781 ORTHO05D003382 4.8e-12 75.1 111 42.3
Actinidia03329 Actinidia chinensis HOM05D002781 ORTHO05D003382 6.3e-12 74.7 71 49.3
Ah.13g073200 Amaranthus hybridus HOM05D002781 ORTHO05D003382 6.3e-12 74.7 116 41.4
Hund22584 Selenicereus undatus HOM05D002781 ORTHO05D003382 6.3e-12 74.7 68 51.5
HPP92_010332 Vanilla planifolia HOM05D002781 ORTHO05D003382 6.3e-12 74.7 99 38.4
Migut.E01411 Erythranthe guttata HOM05D002781 ORTHO05D003382 8.2e-12 74.3 80 45.0
Nitab4.5_0000080g0320 Nicotiana tabacum HOM05D002781 ORTHO05D003382 8.2e-12 74.3 119 37.0
Potri.006G085400 Populus trichocarpa HOM05D002781 ORTHO05D003382 8.2e-12 74.3 71 53.5
SGA_v2.0_scaffold51G18727 Striga asiatica HOM05D002781 ORTHO05D003382 8.2e-12 74.3 86 48.8
ClCG05G017340 Citrullus lanatus HOM05D002781 ORTHO05D003382 1.1e-11 73.9 81 49.4
SalBow8G0076 Salvia bowleyana HOM05D002781 ORTHO05D003382 1.1e-11 73.9 73 49.3
Eucgr.K02027 Eucalyptus grandis HOM05D002781 ORTHO05D003382 1.8e-11 73.2 71 49.3
QL12p029213 Quercus lobata HOM05D002781 ORTHO05D003382 1.8e-11 73.2 103 40.8
SGA_v2.0_scaffold17G08122 Striga asiatica HOM05D002781 ORTHO05D003382 1.8e-11 73.2 77 48.1
TWI34G0804 Tripterygium wilfordii HOM05D002781 ORTHO05D003382 1.8e-11 73.2 89 44.9
TWI63G0346 Tripterygium wilfordii HOM05D002781 ORTHO05D003382 1.8e-11 73.2 81 44.4
Duzib168G0624 Durio zibethinus HOM05D002781 ORTHO05D003382 3.1e-11 72.4 90 46.7
MBI13_g33568_MAGBIO Magnolia biondii HOM05D002781 ORTHO05D003382 3.1e-11 72.4 93 36.6
Sabra06G0064900 Salix brachista HOM05D002781 ORTHO05D003382 3.1e-11 72.4 71 53.5
MD15G1113400 Malus domestica HOM05D002781 ORTHO05D003382 5.3e-11 71.6 86 45.3
Sed0013692 Sechium edule HOM05D002781 ORTHO05D003382 5.3e-11 71.6 78 50.0
Sed0018818 Sechium edule HOM05D002781 ORTHO05D003382 5.3e-11 71.6 110 41.8
AUR62023712 Chenopodium quinoa HOM05D002781 ORTHO05D003382 7.0e-11 71.2 69 50.7
Os02g0686400 Oryza sativa ssp. japonica HOM05D002781 ORTHO05D003382 7.0e-11 71.2 66 50.0
Pp3c21_10900 Physcomitrium patens HOM05D002781 ORTHO05D003382 7.0e-11 71.2 100 41.0
CAN.G786.6 Capsicum annuum HOM05D002781 ORTHO05D003382 9.1e-11 70.9 74 47.3
MD08G1134400 Malus domestica HOM05D002781 ORTHO05D003382 9.1e-11 70.9 81 45.7
Medtr1g014140 Medicago truncatula HOM05D002781 ORTHO05D003382 9.1e-11 70.9 104 41.3
Atru.chr7.2704 Acer truncatum HOM05D002781 ORTHO05D003382 1.2e-10 70.5 85 42.4
CANSAT78G1421 Cannabis sativa HOM05D002781 ORTHO05D003382 1.2e-10 70.5 84 47.6
CBR_g19622 Chara braunii HOM05D002781 ORTHO05D003382 1.2e-10 70.5 102 39.2
HPP92_010423 Vanilla planifolia HOM05D002781 ORTHO05D003382 2.0e-10 69.7 65 52.3
Glyma.14G101500 Glycine max HOM05D002781 ORTHO05D003382 2.6e-10 69.3 120 39.2
Cfa013226 Carpinus fangiana HOM05D002781 ORTHO05D003382 3.5e-10 68.9 81 44.4
Gohir.A07G001200 Gossypium hirsutum HOM05D002781 ORTHO05D003382 3.5e-10 68.9 82 46.3
Peaxi162Scf00619g00214 Petunia axillaris HOM05D002781 ORTHO05D003382 3.5e-10 68.9 80 43.8
RcHm_v2.0_Chr6g0312531 Rosa chinensis HOM05D002781 ORTHO05D003382 3.5e-10 68.9 72 50.0
Haze_21649 Corylus avellana HOM05D002781 ORTHO05D003382 4.5e-10 68.6 81 44.4
Nitab4.5_0001449g0030 Nicotiana tabacum HOM05D002781 ORTHO05D003382 4.5e-10 68.6 114 36.8
FvH4_2g30550 Fragaria vesca HOM05D002781 ORTHO05D003382 7.7e-10 67.8 72 48.6
FAN20G1456 Fragaria x ananassa HOM05D002781 ORTHO05D003382 7.7e-10 67.8 76 47.4
FAN24G1450 Fragaria x ananassa HOM05D002781 ORTHO05D003382 7.7e-10 67.8 72 48.6
SalBow1G4615 Salvia bowleyana HOM05D002781 ORTHO05D003382 7.7e-10 67.8 105 40.0
Zm00001eb338990 Zea mays HOM05D002781 ORTHO05D003382 7.7e-10 67.8 66 47.0
Manes.18G112500 Manihot esculenta HOM05D002781 ORTHO05D003382 1.0e-09 67.4 74 48.6
ATR0463G001 Amborella trichopoda HOM05D002781 ORTHO05D003382 1.3e-09 67.0 70 47.1
Ciclev10004669m.g Citrus clementina HOM05D002781 ORTHO05D003382 1.3e-09 67.0 80 43.8
Prupe.1G463800 Prunus persica HOM05D002781 ORTHO05D003382 1.3e-09 67.0 74 45.9
Gohir.D07G001600 Gossypium hirsutum HOM05D002781 ORTHO05D003382 1.7e-09 66.6 82 46.3
Gorai.001G001300 Gossypium raimondii HOM05D002781 ORTHO05D003382 1.7e-09 66.6 82 46.3
Phvul.001G030000 Phaseolus vulgaris HOM05D002781 ORTHO05D003382 2.2e-09 66.2 105 41.9
FAN27G0558 Fragaria x ananassa HOM05D002781 ORTHO05D003382 2.9e-09 65.9 78 46.2
Mapoly0132s0010 Marchantia polymorpha HOM05D002781 ORTHO05D003382 3.8e-09 65.5 126 34.9
Zm00001eb231430 Zea mays HOM05D002781 ORTHO05D003382 3.8e-09 65.5 66 47.0
Manes.02G204300 Manihot esculenta HOM05D002781 ORTHO05D003382 5.0e-09 65.1 69 50.7
COL.COLO4_18646 Corchorus olitorius HOM05D002781 ORTHO05D003382 8.5e-09 64.3 80 45.0
FAN24G1470 Fragaria x ananassa HOM05D002781 ORTHO05D003382 8.5e-09 64.3 101 38.6
PSO017G0307 Papaver somniferum HOM05D002781 ORTHO05D003382 1.1e-08 63.9 70 41.4
PSO478G0309 Papaver somniferum HOM05D002781 ORTHO05D003382 1.1e-08 63.9 70 41.4
Glyma.17G223600 Glycine max HOM05D002781 ORTHO05D003382 1.5e-08 63.5 73 47.9
FvH4_2g15870 Fragaria vesca HOM05D002781 ORTHO05D003382 1.9e-08 63.2 101 37.6
FAN24G3093 Fragaria x ananassa HOM05D002781 ORTHO05D003382 1.9e-08 63.2 101 37.6
Eucgr.C03981 Eucalyptus grandis HOM05D002781 ORTHO05D003382 3.2e-08 62.4 119 33.6
Ca_25166_v3 Cicer arietinum L. HOM05D002781 ORTHO05D003382 4.2e-08 62.0 71 45.1
Lj5g0001123 Lotus japonicus HOM05D002781 ORTHO05D003382 4.2e-08 62.0 71 46.5
VMungo0647G0806 Vigna mungo HOM05D002781 ORTHO05D003382 4.2e-08 62.0 73 46.6
Lalb_Chr10g0107001 Lupinus albus HOM05D002781 ORTHO05D003382 5.5e-08 61.6 85 37.6
Sc19g0002420 Simmondsia chinensis HOM05D002781 ORTHO05D003382 5.5e-08 61.6 68 47.1
Lalb_Chr04g0248401 Lupinus albus HOM05D002781 ORTHO05D003382 7.2e-08 61.2 71 43.7
Ca_13063_v3 Cicer arietinum L. HOM05D002781 ORTHO05D003382 1.2e-07 60.5 81 43.2
TPR.G30251 Trifolium pratense HOM05D002781 ORTHO05D003382 4.7e-07 58.5 107 36.4
AT4G31180 Arabidopsis thaliana HOM05D002781 ORTHO05D003382 6.1e-07 58.2 93 36.6
Psat6g026040 Pisum sativum HOM05D002781 ORTHO05D003382 6.1e-07 58.2 71 45.1
Cpa.g.sc37.195 Carica papaya HOM05D002781 ORTHO05D003382 1.4e-06 57.0 86 39.5
CDE09G0887 Ceratophyllum demersum HOM05D002781 ORTHO05D003382 2.3e-06 56.2 54 53.7
Aa31LG2G19130 Aethionema arabicum HOM05D002781 ORTHO05D003382 6.7e-06 54.7 80 38.8
Carub.0007s0935 Capsella rubella HOM05D002781 ORTHO05D003382 6.7e-06 54.7 114 32.5


User provided reference genes

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