Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14594 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 7.1e-142 507.3 264 100.0
SEGI_34698 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 7.1e-142 507.3 264 100.0
SEGI_08556 Sequoiadendron giganteum HOM05D009239 ORTHO05D017074 2.1e-53 213.4 142 81.7
SEGI_19813 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 4.3e-46 189.1 105 89.5
SEGI_34008 Sequoiadendron giganteum HOM05D000140 ORTHO05D008077 7.3e-46 188.3 142 69.0
SEGI_29889 Sequoiadendron giganteum HOM05D006212 ORTHO05D008245 1.7e-42 177.2 132 74.2
ATR0680G123 Amborella trichopoda HOM05D005098 ORTHO05D006646 1.5e-35 154.1 109 64.2
Solyc02g078440.3 Solanum lycopersicum HOM05D005098 ORTHO05D006646 4.5e-35 152.5 100 70.0
Sopen02g023290 Solanum pennellii HOM05D005098 ORTHO05D006646 4.5e-35 152.5 100 70.0
Actinidia07581 Actinidia chinensis HOM05D005098 ORTHO05D006646 7.6e-35 151.8 100 69.0
Peaxi162Scf00736g00425 Petunia axillaris HOM05D005098 ORTHO05D006646 7.6e-35 151.8 99 67.7
Atru.chr10.1909 Acer truncatum HOM05D005098 ORTHO05D006646 1.7e-34 150.6 110 66.4
Nitab4.5_0000119g0020 Nicotiana tabacum HOM05D005098 ORTHO05D006646 1.7e-34 150.6 98 68.4
Eucgr.E03123 Eucalyptus grandis HOM05D005098 ORTHO05D006646 2.2e-34 150.2 109 65.1
AUR62016992 Chenopodium quinoa HOM05D005098 ORTHO05D006646 2.9e-34 149.8 96 67.7
Eucgr.E03323 Eucalyptus grandis HOM05D005098 ORTHO05D006646 3.8e-34 149.4 109 64.2
HPP92_021892 Vanilla planifolia HOM05D005098 ORTHO05D006646 3.8e-34 149.4 99 64.6
Lj7A690T49 Lonicera japonica HOM05D005098 ORTHO05D006646 4.9e-34 149.1 108 63.0
Manes.17G044000 Manihot esculenta HOM05D005098 ORTHO05D006646 4.9e-34 149.1 100 68.0
Os04g0680000 Oryza sativa ssp. japonica HOM05D005098 ORTHO05D006646 4.9e-34 149.1 99 68.7
Sabra04G0025700 Salix brachista HOM05D005098 ORTHO05D006646 4.9e-34 149.1 100 68.0
Nn1g06591 Nelumbo nucifera HOM05D005098 ORTHO05D006646 6.4e-34 148.7 100 67.0
CAN.G1164.12 Capsicum annuum HOM05D005098 ORTHO05D006646 1.1e-33 147.9 101 65.3
CiPaw.09G058200 Carya illinoinensis HOM05D005098 ORTHO05D006646 1.1e-33 147.9 100 68.0
TWI38G1357 Tripterygium wilfordii HOM05D005098 ORTHO05D006646 1.1e-33 147.9 96 68.8
AUR62014801 Chenopodium quinoa HOM05D005098 ORTHO05D006646 1.4e-33 147.5 96 66.7
SalBow3G0169 Salvia bowleyana HOM05D005098 ORTHO05D006646 1.4e-33 147.5 96 66.7
vmacro15900 Vaccinium macrocarpon HOM05D005098 ORTHO05D006646 1.4e-33 147.5 96 69.8
Aqoxy3G01794 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 1.9e-33 147.1 97 68.0
MSTRG.2567 Avicennia marina HOM05D005098 ORTHO05D006646 1.9e-33 147.1 100 67.0
ClCG01G022890 Citrullus lanatus HOM05D005098 ORTHO05D006646 1.9e-33 147.1 96 68.8
CsaV3_6G050060 Cucumis sativus L. HOM05D005098 ORTHO05D006646 2.4e-33 146.7 100 67.0
Nitab4.5_0002158g0040 Nicotiana tabacum HOM05D005098 ORTHO05D006646 2.4e-33 146.7 95 68.4
Aqoxy7G02591 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 3.2e-33 146.4 96 67.7
PGR142G2026 Punica granatum HOM05D005098 ORTHO05D006646 3.2e-33 146.4 100 67.0
Sp7g17170 Schrenkiella parvula HOM05D005098 ORTHO05D006646 3.2e-33 146.4 110 60.9
CSS0027379 Camellia sinensis var. sinensis HOM05D005098 ORTHO05D006646 4.2e-33 146.0 100 65.0
AL7G37700 Arabidopsis lyrata HOM05D005098 ORTHO05D006646 7.1e-33 145.2 109 60.6
Carub.0007s2440 Capsella rubella HOM05D005098 ORTHO05D006646 7.1e-33 145.2 110 60.0
Potri.004G041600 Populus trichocarpa HOM05D005098 ORTHO05D006646 7.1e-33 145.2 100 66.0
BcaNung00134 Brassica carinata HOM05D005098 ORTHO05D006646 9.3e-33 144.8 110 60.9
Medtr3g072660 Medicago truncatula HOM05D005098 ORTHO05D006646 9.3e-33 144.8 109 63.3
Zm00001eb065950 Zea mays HOM05D005098 ORTHO05D006646 9.3e-33 144.8 100 66.0
Cpa.g.sc27.58 Carica papaya HOM05D005098 ORTHO05D006646 1.2e-32 144.4 101 63.4
Hund21233 Selenicereus undatus HOM05D005098 ORTHO05D006646 1.2e-32 144.4 96 66.7
CARHR223580 Cardamine hirsuta HOM05D005098 ORTHO05D006646 1.6e-32 144.1 110 59.1
Psat7g112680 Pisum sativum HOM05D005098 ORTHO05D006646 1.6e-32 144.1 109 63.3
Migut.G00672 Erythranthe guttata HOM05D005098 ORTHO05D006646 2.1e-32 143.7 103 64.1
Medtr4g088935 Medicago truncatula HOM05D005098 ORTHO05D006646 2.1e-32 143.7 109 63.3
PSO832G2562 Papaver somniferum HOM05D005098 ORTHO05D006646 2.1e-32 143.7 101 69.3
RhsimUnG0054100 Rhododendron simsii HOM05D005098 ORTHO05D006646 2.7e-32 143.3 96 67.7
TPR.G12033 Trifolium pratense HOM05D005098 ORTHO05D006646 2.7e-32 143.3 96 67.7
BcaC09g50435 Brassica carinata HOM05D005098 ORTHO05D006646 3.5e-32 142.9 109 60.6
C01p25440 Brassica napus HOM05D005098 ORTHO05D006646 3.5e-32 142.9 109 60.6
BraA01t01956Z Brassica rapa HOM05D005098 ORTHO05D006646 3.5e-32 142.9 109 60.6
Thhalv10025179m.g Eutrema salsugineum HOM05D005098 ORTHO05D006646 3.5e-32 142.9 110 60.0
EL10Ac8g20363 Beta vulgaris HOM05D005098 ORTHO05D006646 4.6e-32 142.5 100 62.0
Glyma.13G180800 Glycine max HOM05D005098 ORTHO05D006646 4.6e-32 142.5 100 65.0
AT4G17020 Arabidopsis thaliana HOM05D005098 ORTHO05D006646 6.0e-32 142.1 110 59.1
Rhsim10G0081000 Rhododendron simsii HOM05D005098 ORTHO05D006646 6.0e-32 142.1 94 68.1
CANSAT35G1139 Cannabis sativa HOM05D005098 ORTHO05D006646 7.9e-32 141.7 95 66.3
Lalb_Chr16g0383691 Lupinus albus HOM05D005098 ORTHO05D006646 7.9e-32 141.7 109 61.5
Nitab4.5_0005954g0050 Nicotiana tabacum HOM05D005098 ORTHO05D006646 7.9e-32 141.7 104 63.5
VMungo0647G1277 Vigna mungo HOM05D005098 ORTHO05D006646 1.0e-31 141.4 96 65.6
Ah.09g237250 Amaranthus hybridus HOM05D005098 ORTHO05D006646 1.7e-31 140.6 98 63.3
RcHm_v2.0_Chr5g0008121 Rosa chinensis HOM05D005098 ORTHO05D006646 1.7e-31 140.6 103 66.0
SGA_v2.0_scaffold111G31518 Striga asiatica HOM05D005098 ORTHO05D006646 2.3e-31 140.2 103 62.1
DCAR_028090 Daucus carota HOM05D005098 ORTHO05D006646 3.0e-31 139.8 99 60.6
FvH4_3g09430 Fragaria vesca HOM05D005098 ORTHO05D006646 3.0e-31 139.8 103 65.0
FAN11G1346 Fragaria x ananassa HOM05D005098 ORTHO05D006646 3.0e-31 139.8 103 65.0
PSO210G7403 Papaver somniferum HOM05D005098 ORTHO05D006646 3.0e-31 139.8 101 67.3
QL05p039825 Quercus lobata HOM05D005098 ORTHO05D006646 3.0e-31 139.8 96 65.6
HanXRQChr17g0560221 Helianthus annuus HOM05D005098 ORTHO05D006646 5.1e-31 139.0 96 63.5
THA.LOC104814462 Tarenaya hassleriana HOM05D005098 ORTHO05D006646 5.1e-31 139.0 101 61.4
Gohir.D10G025400 Gossypium hirsutum HOM05D005098 ORTHO05D006646 6.6e-31 138.7 101 63.4
Gorai.011G026700 Gossypium raimondii HOM05D005098 ORTHO05D006646 6.6e-31 138.7 97 64.9
ECA234G2003 Erigeron canadensis HOM05D005098 ORTHO05D006646 8.7e-31 138.3 96 64.6
FAN16G0038 Fragaria x ananassa HOM05D005098 ORTHO05D006646 8.7e-31 138.3 103 64.1
Gohir.A10G024700 Gossypium hirsutum HOM05D005098 ORTHO05D006646 8.7e-31 138.3 101 64.4
arahy.Tifrunner.gnm1.ann1.AUX6FS Arachis hypogaea HOM05D005098 ORTHO05D006646 1.1e-30 137.9 97 66.0
Glyma.07G195500 Glycine max HOM05D005098 ORTHO05D006646 1.1e-30 137.9 100 61.0
Lsat_1_v5_gn_4_52761 Lactuca sativa HOM05D005098 ORTHO05D006646 1.1e-30 137.9 96 62.5
TAR627G0710 Trochodendron aralioides HOM05D005098 ORTHO05D006646 1.1e-30 137.9 96 64.6
Rhsim02G0128000 Rhododendron simsii HOM05D005098 ORTHO05D006646 1.5e-30 137.5 96 66.7
Pp3c3_5470 Physcomitrium patens HOM05D005098 ORTHO05D006646 1.9e-30 137.1 106 57.5
Thecc.06G189900 Theobroma cacao HOM05D005098 ORTHO05D006646 1.9e-30 137.1 101 65.3
Lj4g0017402 Lotus japonicus HOM05D005098 ORTHO05D006646 2.5e-30 136.7 96 63.5
arahy.Tifrunner.gnm1.ann1.Q8E5AY Arachis hypogaea HOM05D005098 ORTHO05D006646 3.3e-30 136.3 100 64.0
A01p20290 Brassica napus HOM05D005098 ORTHO05D006646 3.3e-30 136.3 103 61.2
MELO3C007290.2 Cucumis melo HOM05D005098 ORTHO05D006646 3.3e-30 136.3 90 67.8
Mapoly0047s0044 Marchantia polymorpha HOM05D005098 ORTHO05D006646 2.1e-29 133.7 109 56.9
Aa31LG2G13100 Aethionema arabicum HOM05D005098 ORTHO05D006646 3.6e-29 132.9 100 58.0
Cc01_g06430 Coffea canephora HOM05D005098 ORTHO05D006646 3.6e-29 132.9 98 62.2
Duzib235G1364 Durio zibethinus HOM05D005098 ORTHO05D006646 8.1e-29 131.7 98 61.2
SEGI_22621 Sequoiadendron giganteum HOM05D002347 ORTHO05D014789 8.1e-29 131.7 136 51.5
MD05G1314300 Malus domestica HOM05D005098 ORTHO05D006646 1.1e-28 131.3 98 62.2
SEGI_26654 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.1e-28 131.3 135 51.9
MD10G1295600 Malus domestica HOM05D005098 ORTHO05D006646 1.8e-28 130.6 98 61.2
SEGI_35341 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.8e-28 130.6 136 50.7
Duzib192G0974 Durio zibethinus HOM05D005098 ORTHO05D006646 2.4e-28 130.2 98 62.2
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 4.0e-28 129.4 94 63.8
SEGI_22261 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 5.3e-28 129.0 135 51.1
SEGI_36376 Sequoiadendron giganteum HOM05D009239 ORTHO05D006039 4.5e-27 125.9 127 51.2
unitig_736.g22566 Utricularia gibba HOM05D005098 ORTHO05D006646 4.5e-27 125.9 88 64.8
Haze_06488 Corylus avellana HOM05D005098 ORTHO05D006646 5.8e-27 125.6 78 70.5
SEGI_39373 Sequoiadendron giganteum HOM05D000031 ORTHO05D012700 7.6e-27 125.2 125 51.2
SMO271G0092 Selaginella moellendorffii HOM05D005098 ORTHO05D006646 9.9e-27 124.8 97 60.8
SEGI_15569 Sequoiadendron giganteum HOM05D001792 ORTHO05D001821 1.7e-26 124.0 116 54.3
Dinv40543 Davidia involucrata HOM05D005098 ORTHO05D006646 2.9e-26 123.2 100 60.0
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 3.8e-26 122.9 85 61.2
Prupe.4G044800 Prunus persica HOM05D005098 ORTHO05D006646 6.4e-26 122.1 93 61.3
CBR_g44575 Chara braunii HOM05D005098 ORTHO05D006646 4.2e-25 119.4 95 52.6
SEGI_28364 Sequoiadendron giganteum HOM05D000032 ORTHO05D004701 1.2e-24 117.9 118 55.1
CBR_g45762 Chara braunii HOM05D005098 ORTHO05D006646 2.7e-24 116.7 95 49.5
Haze_05744 Corylus avellana HOM05D005098 ORTHO05D006646 1.3e-23 114.4 81 64.2
AagrBONN_evm.TU.Sc2ySwM_117.270 Anthoceros agrestis HOM05D005098 ORTHO05D006646 2.5e-22 110.2 95 52.6
SHI01874 Sapria himalayana HOM05D005098 ORTHO05D006646 1.8e-20 104.0 100 51.0
GSVIVG01002018001 Vitis vinifera HOM05D005098 ORTHO05D006646 6.9e-20 102.1 82 53.7
MBI18_g17000_MAGBIO Magnolia biondii HOM05D005098 ORTHO05D006646 2.6e-19 100.1 100 52.0
SEGI_30407 Sequoiadendron giganteum HOM05D004758 ORTHO05D006063 5.8e-19 99.0 145 42.1
Oeu017728.1 Olea europaea HOM05D005098 ORTHO05D006646 1.0e-18 98.2 68 60.3
Phvul.002G227900 Phaseolus vulgaris HOM05D005098 ORTHO05D006646 2.9e-18 96.7 70 60.0
FAN11G1498 Fragaria x ananassa HOM05D005098 ORTHO05D006646 4.9e-18 95.9 60 73.3
Ca_18535_v3 Cicer arietinum L. HOM05D005098 ORTHO05D006646 1.4e-17 94.4 56 76.8
FAN21G0237 Fragaria x ananassa HOM05D005098 ORTHO05D006646 1.4e-17 94.4 60 71.7
SEGI_34830 Sequoiadendron giganteum HOM05D000121 ORTHO05D000102 4.2e-17 92.8 149 43.0
Duzib209G0004 Durio zibethinus HOM05D005098 ORTHO05D006646 2.3e-15 87.0 68 55.9
SEGI_31962 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 9.6e-14 81.6 134 35.8
PRCOL_00001787 Prasinoderma coloniale HOM05D005098 ORTHO05D006646 1.6e-13 80.9 95 42.1
Cre09.g403300 Chlamydomonas reinhardtii HOM05D005098 ORTHO05D006646 6.3e-13 79.0 93 38.7
SEGI_10360 Sequoiadendron giganteum HOM05D000070 ORTHO05D000722 8.2e-13 78.6 66 57.6
SEGI_18042 Sequoiadendron giganteum HOM05D004148 ORTHO05D004709 1.4e-12 77.8 136 39.0
Cc01_g06820 Coffea canephora HOM05D005098 ORTHO05D006646 3.1e-12 76.6 85 44.7
COL.COLO4_32260 Corchorus olitorius HOM05D005098 ORTHO05D006646 5.9e-11 72.4 61 54.1
MCO15G365 Micromonas commoda HOM05D005098 ORTHO05D006646 3.8e-10 69.7 92 38.0
SEGI_31470 Sequoiadendron giganteum HOM05D009239 ORTHO05D012700 6.5e-10 68.9 106 35.8
SEGI_33233 Sequoiadendron giganteum HOM05D000038 ORTHO05D000689 1.4e-09 67.8 141 29.8
SEGI_20978 Sequoiadendron giganteum HOM05D009239 ORTHO05D012700 2.5e-09 67.0 44 61.4
SEGI_15900 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 6.1e-08 62.4 35 80.0
SEGI_37188 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 3.9e-07 59.7 108 32.4
Cfa026287 Carpinus fangiana HOM05D003704 ORTHO05D005892 6.7e-07 58.9 103 33.0
SEGI_28378 Sequoiadendron giganteum HOM05D000020 ORTHO05D002192 6.7e-07 58.9 111 30.6
Gorai.006G108000 Gossypium raimondii HOM05D005098 ORTHO05D006646 9.7e-06 55.1 33 72.7


User provided reference genes

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