Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13087 Sequoiadendron giganteum HOM05D007241 ORTHO05D009142 5.9e-112 407.5 203 100.0
CANSAT35G2041 Cannabis sativa HOM05D007241 ORTHO05D009142 4.6e-16 89.0 73 54.8
Thecc.05G024800 Theobroma cacao HOM05D007241 ORTHO05D009142 8.8e-15 84.7 80 52.5
AUR62015997 Chenopodium quinoa HOM05D007241 ORTHO05D009142 2.0e-14 83.6 74 54.1
TAR633G0637 Trochodendron aralioides HOM05D007241 ORTHO05D009142 2.0e-14 83.6 75 53.3
Nn2g11326 Nelumbo nucifera HOM05D007241 ORTHO05D009142 3.3e-14 82.8 75 54.7
Eucgr.K03006 Eucalyptus grandis HOM05D007241 ORTHO05D009142 4.3e-14 82.4 171 35.1
Oeu015010.1 Olea europaea HOM05D007241 ORTHO05D009142 7.4e-14 81.6 79 49.4
Aqoxy1G00764 Aquilegia oxysepala HOM05D007241 ORTHO05D009142 1.3e-13 80.9 93 49.5
MELO3C003216.2 Cucumis melo HOM05D007241 ORTHO05D009142 1.3e-13 80.9 90 44.4
THA.LOC104823276 Tarenaya hassleriana HOM05D007241 ORTHO05D009142 1.3e-13 80.9 75 48.0
Dinv35525 Davidia involucrata HOM05D007241 ORTHO05D009142 1.7e-13 80.5 119 42.0
Manes.08G083700 Manihot esculenta HOM05D007241 ORTHO05D009142 1.7e-13 80.5 98 44.9
PSO063G4791 Papaver somniferum HOM05D007241 ORTHO05D009142 1.7e-13 80.5 96 44.8
Sed0022131 Sechium edule HOM05D007241 ORTHO05D009142 1.7e-13 80.5 80 48.8
Atru.chr8.2123 Acer truncatum HOM05D007241 ORTHO05D009142 2.8e-13 79.7 75 53.3
CSS0004399 Camellia sinensis var. sinensis HOM05D007241 ORTHO05D009142 2.8e-13 79.7 75 49.3
Carub.0003s0832 Capsella rubella HOM05D007241 ORTHO05D009142 2.8e-13 79.7 74 52.7
Glyma.01G109100 Glycine max HOM05D007241 ORTHO05D009142 2.8e-13 79.7 83 48.2
MBI14_g28606_MAGBIO Magnolia biondii HOM05D007241 ORTHO05D009142 2.8e-13 79.7 79 50.6
Potri.006G094800 Populus trichocarpa HOM05D007241 ORTHO05D009142 2.8e-13 79.7 75 52.0
Sp3g07590 Schrenkiella parvula HOM05D007241 ORTHO05D009142 3.7e-13 79.3 72 52.8
Hund04733 Selenicereus undatus HOM05D007241 ORTHO05D009142 3.7e-13 79.3 75 48.0
CsaV3_4G025900 Cucumis sativus L. HOM05D007241 ORTHO05D009142 4.8e-13 79.0 84 47.6
Duzib106G0374 Durio zibethinus HOM05D007241 ORTHO05D009142 4.8e-13 79.0 80 50.0
Thhalv10021091m.g Eutrema salsugineum HOM05D007241 ORTHO05D009142 4.8e-13 79.0 67 55.2
Sabra06G0072600 Salix brachista HOM05D007241 ORTHO05D009142 4.8e-13 79.0 75 52.0
GSVIVG01034032001 Vitis vinifera HOM05D007241 ORTHO05D009142 4.8e-13 79.0 201 32.3
PGSC0003DMG400020362 Solanum tuberosum HOM05D007241 ORTHO05D009142 6.3e-13 78.6 75 49.3
BcaC09g48056 Brassica carinata HOM05D007241 ORTHO05D009142 8.2e-13 78.2 72 51.4
BolC1t05471H Brassica oleracea HOM05D007241 ORTHO05D009142 8.2e-13 78.2 79 51.9
CAN.G1233.2 Capsicum annuum HOM05D007241 ORTHO05D009142 8.2e-13 78.2 109 41.3
MD04G1143600 Malus domestica HOM05D007241 ORTHO05D009142 8.2e-13 78.2 73 49.3
PGR004G2498 Punica granatum HOM05D007241 ORTHO05D009142 8.2e-13 78.2 75 49.3
unitig_749.g14176 Utricularia gibba HOM05D007241 ORTHO05D009142 8.2e-13 78.2 67 52.2
Peaxi162Scf00427g00616 Petunia axillaris HOM05D007241 ORTHO05D009142 1.1e-12 77.8 75 48.0
Aa31LG3G1690 Aethionema arabicum HOM05D007241 ORTHO05D009142 1.4e-12 77.4 90 43.3
AL3G20320 Arabidopsis lyrata HOM05D007241 ORTHO05D009142 1.8e-12 77.0 136 36.8
CARHR083550 Cardamine hirsuta HOM05D007241 ORTHO05D009142 1.8e-12 77.0 135 36.3
Hma1.2p1_0671F.1_g200780 Hydrangea macrophylla HOM05D007241 ORTHO05D009142 1.8e-12 77.0 79 46.8
Lj3g0002129 Lotus japonicus HOM05D007241 ORTHO05D009142 1.8e-12 77.0 78 47.4
Lalb_Chr13g0291331 Lupinus albus HOM05D007241 ORTHO05D009142 1.8e-12 77.0 75 49.3
Sc22g0004510 Simmondsia chinensis HOM05D007241 ORTHO05D009142 1.8e-12 77.0 75 46.7
Solyc09g011830.4 Solanum lycopersicum HOM05D007241 ORTHO05D009142 1.8e-12 77.0 149 34.2
MSTRG.5609 Avicennia marina HOM05D007241 ORTHO05D009142 2.4e-12 76.6 101 39.6
BcaC09g48011 Brassica carinata HOM05D007241 ORTHO05D009142 2.4e-12 76.6 129 37.2
Cpa.g.sc56.88 Carica papaya HOM05D007241 ORTHO05D009142 2.4e-12 76.6 85 45.9
Duzib093G2007 Durio zibethinus HOM05D007241 ORTHO05D009142 2.4e-12 76.6 75 49.3
Phvul.010G006200 Phaseolus vulgaris HOM05D007241 ORTHO05D009142 2.4e-12 76.6 76 46.1
Prupe.6G268100 Prunus persica HOM05D007241 ORTHO05D009142 2.4e-12 76.6 101 43.6
Ah.07g207300 Amaranthus hybridus HOM05D007241 ORTHO05D009142 3.1e-12 76.3 75 49.3
Gorai.012G110300 Gossypium raimondii HOM05D007241 ORTHO05D009142 3.1e-12 76.3 75 49.3
Nitab4.5_0007671g0010 Nicotiana tabacum HOM05D007241 ORTHO05D009142 3.1e-12 76.3 149 34.2
Sopen09g006650 Solanum pennellii HOM05D007241 ORTHO05D009142 3.1e-12 76.3 149 34.2
ATR0618G224 Amborella trichopoda HOM05D007241 ORTHO05D009142 4.1e-12 75.9 81 45.7
AT3G09210 Arabidopsis thaliana HOM05D007241 ORTHO05D009142 5.3e-12 75.5 133 37.6
SalBow3G1957 Salvia bowleyana HOM05D007241 ORTHO05D009142 6.9e-12 75.1 65 49.2
EL10Ac3g05675 Beta vulgaris HOM05D007241 ORTHO05D009142 9.1e-12 74.7 146 34.9
Nitab4.5_0000008g0420 Nicotiana tabacum HOM05D007241 ORTHO05D009142 9.1e-12 74.7 75 48.0
vmacro20223 Vaccinium macrocarpon HOM05D007241 ORTHO05D009142 9.1e-12 74.7 90 42.2
arahy.Tifrunner.gnm1.ann1.IV4I8P Arachis hypogaea HOM05D007241 ORTHO05D009142 1.5e-11 73.9 75 46.7
BraA01t04312Z Brassica rapa HOM05D007241 ORTHO05D009142 1.5e-11 73.9 79 50.6
CiPaw.10G153200 Carya illinoinensis HOM05D007241 ORTHO05D009142 1.5e-11 73.9 74 45.9
Ciclev10012141m.g Citrus clementina HOM05D007241 ORTHO05D009142 1.5e-11 73.9 79 45.6
CDE04G1578 Ceratophyllum demersum HOM05D007241 ORTHO05D009142 2.0e-11 73.6 74 45.9
FvH4_6g12350 Fragaria vesca HOM05D007241 ORTHO05D009142 2.0e-11 73.6 98 40.8
FAN14G0673 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.0e-11 73.6 98 40.8
Gohir.A04G087000 Gossypium hirsutum HOM05D007241 ORTHO05D009142 2.0e-11 73.6 75 48.0
VMungo0331G1333 Vigna mungo HOM05D007241 ORTHO05D009142 2.0e-11 73.6 79 46.8
arahy.Tifrunner.gnm1.ann1.4L01Q9 Arachis hypogaea HOM05D007241 ORTHO05D009142 2.6e-11 73.2 75 45.3
FAN02G0490 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.6e-11 73.2 98 40.8
FAN05G2185 Fragaria x ananassa HOM05D007241 ORTHO05D009142 2.6e-11 73.2 98 40.8
Actinidia13799 Actinidia chinensis HOM05D007241 ORTHO05D009142 4.5e-11 72.4 79 48.1
Cc06_g01830 Coffea canephora HOM05D007241 ORTHO05D009142 4.5e-11 72.4 75 44.0
RcHm_v2.0_Chr3g0464151 Rosa chinensis HOM05D007241 ORTHO05D009142 5.9e-11 72.0 164 33.5
Haze_20925 Corylus avellana HOM05D007241 ORTHO05D009142 7.7e-11 71.6 79 44.3
TWI74G0988 Tripterygium wilfordii HOM05D007241 ORTHO05D009142 1.0e-10 71.2 81 43.2
Ca_20114_v3 Cicer arietinum L. HOM05D007241 ORTHO05D009142 1.3e-10 70.9 87 41.4
ClCG04G007350 Citrullus lanatus HOM05D007241 ORTHO05D009142 1.7e-10 70.5 111 36.9
Psat7g241800 Pisum sativum HOM05D007241 ORTHO05D009142 2.2e-10 70.1 78 42.3
Migut.J00242 Erythranthe guttata HOM05D007241 ORTHO05D009142 2.9e-10 69.7 78 44.9
SGA_v2.0_scaffold85G26792 Striga asiatica HOM05D007241 ORTHO05D009142 6.5e-10 68.6 80 41.2
Gohir.D04G127300 Gossypium hirsutum HOM05D007241 ORTHO05D009142 1.4e-09 67.4 88 42.0
Rhsim05G0202600 Rhododendron simsii HOM05D007241 ORTHO05D009142 1.4e-09 67.4 92 39.1
TPR.G40038 Trifolium pratense HOM05D007241 ORTHO05D009142 1.4e-09 67.4 75 40.0
Medtr4g019060 Medicago truncatula HOM05D007241 ORTHO05D009142 2.5e-09 66.6 75 41.3
HPP92_014289 Vanilla planifolia HOM05D007241 ORTHO05D009142 5.5e-09 65.5 93 36.6
ECA233G2042 Erigeron canadensis HOM05D007241 ORTHO05D009142 1.2e-08 64.3 86 38.4
HanXRQChr10g0300011 Helianthus annuus HOM05D007241 ORTHO05D009142 2.1e-08 63.5 86 39.5
Lsat_1_v5_gn_2_72881 Lactuca sativa HOM05D007241 ORTHO05D009142 3.6e-08 62.8 76 39.5
Os03g0825500 Oryza sativa ssp. japonica HOM05D007241 ORTHO05D009142 3.6e-08 62.8 74 41.9
Lj3A958T74 Lonicera japonica HOM05D007241 ORTHO05D009142 1.8e-07 60.5 76 39.5


User provided reference genes

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