Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13032 Sequoiadendron giganteum HOM05D005098 ORTHO05D006646 9.3e-50 199.9 101 100.0
PSO832G2562 Papaver somniferum HOM05D005098 ORTHO05D006646 5.1e-24 114.4 81 66.7
PSO210G7403 Papaver somniferum HOM05D005098 ORTHO05D006646 2.0e-23 112.5 81 64.2
Sc17g0006240 Simmondsia chinensis HOM05D005098 ORTHO05D006646 2.0e-23 112.5 81 63.0
Lj7A690T49 Lonicera japonica HOM05D005098 ORTHO05D006646 3.3e-23 111.7 81 65.4
Carub.0007s2440 Capsella rubella HOM05D005098 ORTHO05D006646 7.4e-23 110.5 81 63.0
Thhalv10025179m.g Eutrema salsugineum HOM05D005098 ORTHO05D006646 7.4e-23 110.5 81 63.0
arahy.Tifrunner.gnm1.ann1.Q8E5AY Arachis hypogaea HOM05D005098 ORTHO05D006646 2.8e-22 108.6 81 64.2
CARHR223580 Cardamine hirsuta HOM05D005098 ORTHO05D006646 3.7e-22 108.2 81 60.5
TAR627G0710 Trochodendron aralioides HOM05D005098 ORTHO05D006646 4.8e-22 107.8 81 60.5
THA.LOC104814462 Tarenaya hassleriana HOM05D005098 ORTHO05D006646 6.3e-22 107.5 81 60.5
GSVIVG01002931001 Vitis vinifera HOM05D005098 ORTHO05D006646 6.3e-22 107.5 81 59.3
Ciclev10009035m.g Citrus clementina HOM05D005098 ORTHO05D006646 8.2e-22 107.1 81 58.0
AT4G17020 Arabidopsis thaliana HOM05D005098 ORTHO05D006646 1.1e-21 106.7 81 59.3
Peaxi162Scf00736g00425 Petunia axillaris HOM05D005098 ORTHO05D006646 1.1e-21 106.7 81 63.0
QL05p039825 Quercus lobata HOM05D005098 ORTHO05D006646 1.1e-21 106.7 81 59.3
VMungo0647G1277 Vigna mungo HOM05D005098 ORTHO05D006646 1.1e-21 106.7 81 63.0
CSS0027379 Camellia sinensis var. sinensis HOM05D005098 ORTHO05D006646 1.4e-21 106.3 81 60.5
CsaV3_6G050060 Cucumis sativus L. HOM05D005098 ORTHO05D006646 1.4e-21 106.3 81 58.0
MD05G1314300 Malus domestica HOM05D005098 ORTHO05D006646 1.4e-21 106.3 84 59.5
Medtr3g072660 Medicago truncatula HOM05D005098 ORTHO05D006646 1.4e-21 106.3 81 59.3
Aa31LG2G13100 Aethionema arabicum HOM05D005098 ORTHO05D006646 1.8e-21 105.9 81 59.3
Lsat_1_v5_gn_4_52761 Lactuca sativa HOM05D005098 ORTHO05D006646 1.8e-21 105.9 81 64.2
Lj4g0017402 Lotus japonicus HOM05D005098 ORTHO05D006646 1.8e-21 105.9 81 61.7
Sed0003361 Sechium edule HOM05D005098 ORTHO05D006646 1.8e-21 105.9 81 58.0
CANSAT35G1139 Cannabis sativa HOM05D005098 ORTHO05D006646 2.4e-21 105.5 81 60.5
ECA234G2003 Erigeron canadensis HOM05D005098 ORTHO05D006646 2.4e-21 105.5 81 63.0
Nn1g06591 Nelumbo nucifera HOM05D005098 ORTHO05D006646 2.4e-21 105.5 81 60.5
PGSC0003DMG400022441 Solanum tuberosum HOM05D005098 ORTHO05D006646 2.4e-21 105.5 81 61.7
TWI38G1357 Tripterygium wilfordii HOM05D005098 ORTHO05D006646 2.4e-21 105.5 81 59.3
CAN.G1164.12 Capsicum annuum HOM05D005098 ORTHO05D006646 3.1e-21 105.1 81 61.7
Lalb_Chr16g0383691 Lupinus albus HOM05D005098 ORTHO05D006646 3.1e-21 105.1 81 61.7
MD10G1295600 Malus domestica HOM05D005098 ORTHO05D006646 3.1e-21 105.1 84 57.1
Phvul.002G227900 Phaseolus vulgaris HOM05D005098 ORTHO05D006646 3.1e-21 105.1 81 61.7
AUR62014801 Chenopodium quinoa HOM05D005098 ORTHO05D006646 4.1e-21 104.8 83 61.4
ClCG01G022890 Citrullus lanatus HOM05D005098 ORTHO05D006646 5.3e-21 104.4 81 56.8
Nitab4.5_0000119g0020 Nicotiana tabacum HOM05D005098 ORTHO05D006646 5.3e-21 104.4 81 61.7
COL.COLO4_32259 Corchorus olitorius HOM05D005098 ORTHO05D006646 6.9e-21 104.0 81 63.0
C01p25440 Brassica napus HOM05D005098 ORTHO05D006646 9.1e-21 103.6 81 58.0
BolC1t02496H Brassica oleracea HOM05D005098 ORTHO05D006646 9.1e-21 103.6 81 58.0
Glyma.07G195500 Glycine max HOM05D005098 ORTHO05D006646 9.1e-21 103.6 81 60.5
Oeu017728.1 Olea europaea HOM05D005098 ORTHO05D006646 9.1e-21 103.6 81 63.0
Sp7g17170 Schrenkiella parvula HOM05D005098 ORTHO05D006646 9.1e-21 103.6 81 59.3
CiPaw.09G058200 Carya illinoinensis HOM05D005098 ORTHO05D006646 1.2e-20 103.2 81 56.8
Prupe.4G044800 Prunus persica HOM05D005098 ORTHO05D006646 1.2e-20 103.2 84 57.1
Hund21233 Selenicereus undatus HOM05D005098 ORTHO05D006646 1.2e-20 103.2 81 58.0
AL7G37700 Arabidopsis lyrata HOM05D005098 ORTHO05D006646 1.5e-20 102.8 81 58.0
Dinv07544 Davidia involucrata HOM05D005098 ORTHO05D006646 1.5e-20 102.8 81 61.7
ATR0680G123 Amborella trichopoda HOM05D005098 ORTHO05D006646 2.0e-20 102.4 81 60.5
BcaC09g50435 Brassica carinata HOM05D005098 ORTHO05D006646 2.0e-20 102.4 81 56.8
Duzib192G0974 Durio zibethinus HOM05D005098 ORTHO05D006646 2.0e-20 102.4 81 60.5
Thecc.06G189900 Theobroma cacao HOM05D005098 ORTHO05D006646 2.0e-20 102.4 79 63.3
HPP92_021892 Vanilla planifolia HOM05D005098 ORTHO05D006646 2.0e-20 102.4 79 59.5
Aqoxy7G02591 Aquilegia oxysepala HOM05D005098 ORTHO05D006646 2.6e-20 102.1 81 61.7
MSTRG.2567 Avicennia marina HOM05D005098 ORTHO05D006646 2.6e-20 102.1 81 61.7
Duzib235G1364 Durio zibethinus HOM05D005098 ORTHO05D006646 2.6e-20 102.1 81 61.7
Glyma.13G180800 Glycine max HOM05D005098 ORTHO05D006646 2.6e-20 102.1 81 60.5
Gohir.A10G024700 Gossypium hirsutum HOM05D005098 ORTHO05D006646 2.6e-20 102.1 81 60.5
Gorai.011G026700 Gossypium raimondii HOM05D005098 ORTHO05D006646 2.6e-20 102.1 81 60.5
Potri.004G041600 Populus trichocarpa HOM05D005098 ORTHO05D006646 2.6e-20 102.1 81 55.6
PGR142G2026 Punica granatum HOM05D005098 ORTHO05D006646 2.6e-20 102.1 81 59.3
Solyc02g078440.3 Solanum lycopersicum HOM05D005098 ORTHO05D006646 2.6e-20 102.1 81 60.5
Sopen02g023290 Solanum pennellii HOM05D005098 ORTHO05D006646 2.6e-20 102.1 81 60.5
COL.COLO4_31494 Corchorus olitorius HOM05D005098 ORTHO05D006646 3.4e-20 101.7 81 61.7
Migut.G00672 Erythranthe guttata HOM05D005098 ORTHO05D006646 3.4e-20 101.7 81 61.7
Sabra04G0025700 Salix brachista HOM05D005098 ORTHO05D006646 3.4e-20 101.7 81 55.6
Eucgr.E03123 Eucalyptus grandis HOM05D005098 ORTHO05D006646 4.5e-20 101.3 81 60.5
Medtr4g088935 Medicago truncatula HOM05D005098 ORTHO05D006646 5.9e-20 100.9 81 59.3
SGA_v2.0_scaffold111G31518 Striga asiatica HOM05D005098 ORTHO05D006646 5.9e-20 100.9 99 50.5
HanXRQChr17g0560221 Helianthus annuus HOM05D005098 ORTHO05D006646 7.7e-20 100.5 81 60.5
SalBow3G0169 Salvia bowleyana HOM05D005098 ORTHO05D006646 7.7e-20 100.5 81 61.7
Eucgr.E03323 Eucalyptus grandis HOM05D005098 ORTHO05D006646 1.0e-19 100.1 81 59.3
Manes.17G044000 Manihot esculenta HOM05D005098 ORTHO05D006646 1.0e-19 100.1 76 63.2
Psat7g112680 Pisum sativum HOM05D005098 ORTHO05D006646 1.0e-19 100.1 81 59.3
Atru.chr10.1909 Acer truncatum HOM05D005098 ORTHO05D006646 1.3e-19 99.8 81 54.3
Duzib209G0004 Durio zibethinus HOM05D005098 ORTHO05D006646 1.3e-19 99.8 81 60.5
TPR.G12033 Trifolium pratense HOM05D005098 ORTHO05D006646 1.3e-19 99.8 81 59.3
EL10Ac8g20363 Beta vulgaris HOM05D005098 ORTHO05D006646 1.7e-19 99.4 81 58.0
BraA01t01956Z Brassica rapa HOM05D005098 ORTHO05D006646 2.2e-19 99.0 81 56.8
Actinidia07581 Actinidia chinensis HOM05D005098 ORTHO05D006646 2.9e-19 98.6 81 58.0
BcaNung00134 Brassica carinata HOM05D005098 ORTHO05D006646 2.9e-19 98.6 81 56.8
Cc01_g06430 Coffea canephora HOM05D005098 ORTHO05D006646 2.9e-19 98.6 81 56.8
Dinv40543 Davidia involucrata HOM05D005098 ORTHO05D006646 2.9e-19 98.6 81 56.8
Nitab4.5_0005954g0050 Nicotiana tabacum HOM05D005098 ORTHO05D006646 2.9e-19 98.6 81 60.5
Haze_05744 Corylus avellana HOM05D005098 ORTHO05D006646 3.8e-19 98.2 81 51.9
Rhsim10G0081000 Rhododendron simsii HOM05D005098 ORTHO05D006646 3.8e-19 98.2 81 60.5
RhsimUnG0054100 Rhododendron simsii HOM05D005098 ORTHO05D006646 3.8e-19 98.2 81 60.5
A01p20290 Brassica napus HOM05D005098 ORTHO05D006646 6.5e-19 97.4 81 55.6
Nitab4.5_0002158g0040 Nicotiana tabacum HOM05D005098 ORTHO05D006646 1.1e-18 96.7 81 59.3
RcHm_v2.0_Chr5g0008121 Rosa chinensis HOM05D005098 ORTHO05D006646 1.1e-18 96.7 84 54.8
FAN21G0237 Fragaria x ananassa HOM05D005098 ORTHO05D006646 1.4e-18 96.3 85 56.5
FvH4_3g09430 Fragaria vesca HOM05D005098 ORTHO05D006646 2.5e-18 95.5 85 56.5
FAN11G1498 Fragaria x ananassa HOM05D005098 ORTHO05D006646 2.5e-18 95.5 85 56.5
FAN16G1787 Fragaria x ananassa HOM05D005098 ORTHO05D006646 2.5e-18 95.5 85 56.5
AUR62016992 Chenopodium quinoa HOM05D005098 ORTHO05D006646 7.2e-18 94.0 64 70.3
Os04g0680000 Oryza sativa ssp. japonica HOM05D005098 ORTHO05D006646 9.4e-18 93.6 84 51.2
Mapoly0047s0044 Marchantia polymorpha HOM05D005098 ORTHO05D006646 3.6e-17 91.7 81 49.4
SMO271G0092 Selaginella moellendorffii HOM05D005098 ORTHO05D006646 4.7e-17 91.3 83 54.2
unitig_736.g22566 Utricularia gibba HOM05D005098 ORTHO05D006646 1.0e-16 90.1 81 56.8
Zm00001eb065950 Zea mays HOM05D005098 ORTHO05D006646 1.0e-16 90.1 84 48.8
MBI18_g17000_MAGBIO Magnolia biondii HOM05D005098 ORTHO05D006646 5.1e-16 87.8 57 68.4
SHI01874 Sapria himalayana HOM05D005098 ORTHO05D006646 5.1e-16 87.8 61 65.6
Ah.09g237250 Amaranthus hybridus HOM05D005098 ORTHO05D006646 6.7e-16 87.4 71 60.6
Haze_06488 Corylus avellana HOM05D005098 ORTHO05D006646 1.5e-15 86.3 57 66.7
Pp3c3_5470 Physcomitrium patens HOM05D005098 ORTHO05D006646 1.5e-15 86.3 81 50.6
vmacro15900 Vaccinium macrocarpon HOM05D005098 ORTHO05D006646 2.0e-15 85.9 68 58.8
Cpa.g.sc27.58 Carica papaya HOM05D005098 ORTHO05D006646 1.3e-14 83.2 56 67.9
arahy.Tifrunner.gnm1.ann1.MC3R28 Arachis hypogaea HOM05D005098 ORTHO05D006646 9.1e-13 77.0 56 64.3
CBR_g44575 Chara braunii HOM05D005098 ORTHO05D006646 2.6e-12 75.5 83 45.8
DCAR_028090 Daucus carota HOM05D005098 ORTHO05D006646 1.3e-11 73.2 68 48.5
CBR_g45762 Chara braunii HOM05D005098 ORTHO05D006646 5.5e-10 67.8 83 41.0
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 2.6e-07 58.9 52 53.8


User provided reference genes

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