Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12516 Sequoiadendron giganteum HOM05D006308 ORTHO05D007820 1.8e-159 565.8 283 100.0
MBI04_g08705_MAGBIO Magnolia biondii HOM05D006308 ORTHO05D007820 4.0e-58 229.2 156 69.2
MELO3C016177.2 Cucumis melo HOM05D006308 ORTHO05D007820 5.8e-57 225.3 174 64.4
CsaV3_4G007640 Cucumis sativus L. HOM05D006308 ORTHO05D007820 5.8e-57 225.3 181 60.8
CDE06G0902 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 3.8e-56 222.6 155 68.4
Ciclev10021874m.g Citrus clementina HOM05D006308 ORTHO05D007820 3.8e-56 222.6 200 56.0
ATR0605G149 Amborella trichopoda HOM05D006308 ORTHO05D007820 6.4e-56 221.9 154 68.2
Lalb_Chr20g0108751 Lupinus albus HOM05D006308 ORTHO05D007820 8.4e-56 221.5 193 58.0
Phvul.005G057100 Phaseolus vulgaris HOM05D006308 ORTHO05D007820 8.4e-56 221.5 180 61.7
Gohir.A04G049000 Gossypium hirsutum HOM05D006308 ORTHO05D007820 1.9e-55 220.3 162 65.4
Gorai.009G355200 Gossypium raimondii HOM05D006308 ORTHO05D007820 2.4e-55 219.9 162 65.4
Thecc.07G152500 Theobroma cacao HOM05D006308 ORTHO05D007820 2.4e-55 219.9 162 65.4
ClCG07G010660 Citrullus lanatus HOM05D006308 ORTHO05D007820 5.4e-55 218.8 154 67.5
Nn6g31547 Nelumbo nucifera HOM05D006308 ORTHO05D007820 5.4e-55 218.8 187 59.4
arahy.Tifrunner.gnm1.ann1.1EF43V Arachis hypogaea HOM05D006308 ORTHO05D007820 7.1e-55 218.4 162 65.4
Sed0010671 Sechium edule HOM05D006308 ORTHO05D007820 7.1e-55 218.4 174 63.8
FAN16G0301 Fragaria x ananassa HOM05D006308 ORTHO05D007820 1.2e-54 217.6 182 58.8
FAN21G3038 Fragaria x ananassa HOM05D006308 ORTHO05D007820 1.2e-54 217.6 182 58.8
THA.LOC104822752 Tarenaya hassleriana HOM05D006308 ORTHO05D007820 1.2e-54 217.6 159 65.4
Glyma.08G172200 Glycine max HOM05D006308 ORTHO05D007820 2.1e-54 216.9 186 59.7
Gohir.D05G331300 Gossypium hirsutum HOM05D006308 ORTHO05D007820 2.1e-54 216.9 162 64.2
FvH4_3g15760 Fragaria vesca HOM05D006308 ORTHO05D007820 2.7e-54 216.5 182 58.2
Eucgr.F01457 Eucalyptus grandis HOM05D006308 ORTHO05D007820 4.6e-54 215.7 153 68.0
Aqoxy5G00928 Aquilegia oxysepala HOM05D006308 ORTHO05D007820 6.0e-54 215.3 158 64.6
Potri.011G142900 Populus trichocarpa HOM05D006308 ORTHO05D007820 7.8e-54 214.9 166 62.7
Glyma.15G255800 Glycine max HOM05D006308 ORTHO05D007820 1.0e-53 214.5 186 59.1
RcHm_v2.0_Chr5g0026561 Rosa chinensis HOM05D006308 ORTHO05D007820 1.0e-53 214.5 168 62.5
CSS0031885 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 1.3e-53 214.2 199 54.8
CSS0041769 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 1.3e-53 214.2 199 54.8
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 1.7e-53 213.8 162 62.3
Carub.0005s0924 Capsella rubella HOM05D006308 ORTHO05D007820 3.0e-53 213.0 170 60.0
Lj3g0010937 Lotus japonicus HOM05D006308 ORTHO05D007820 3.0e-53 213.0 193 58.0
Manes.14G016400 Manihot esculenta HOM05D006308 ORTHO05D007820 3.0e-53 213.0 163 62.6
Medtr2g069470 Medicago truncatula HOM05D006308 ORTHO05D007820 3.9e-53 212.6 181 59.1
GSVIVG01020411001 Vitis vinifera HOM05D006308 ORTHO05D007820 3.9e-53 212.6 151 66.2
Duzib213G0994 Durio zibethinus HOM05D006308 ORTHO05D007820 5.1e-53 212.2 158 63.3
AL3G24610 Arabidopsis lyrata HOM05D006308 ORTHO05D007820 6.6e-53 211.8 169 60.9
AT3G12930 Arabidopsis thaliana HOM05D006308 ORTHO05D007820 6.6e-53 211.8 170 60.0
CiPaw.12G004900 Carya illinoinensis HOM05D006308 ORTHO05D007820 6.6e-53 211.8 153 64.7
TPR.G9745 Trifolium pratense HOM05D006308 ORTHO05D007820 6.6e-53 211.8 190 56.8
Atru.chr2.1759 Acer truncatum HOM05D006308 ORTHO05D007820 1.1e-52 211.1 162 61.7
CDE08G1673 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 1.1e-52 211.1 151 66.2
PSO170G1595 Papaver somniferum HOM05D006308 ORTHO05D007820 1.1e-52 211.1 156 60.9
HPP92_015477 Vanilla planifolia HOM05D006308 ORTHO05D007820 1.1e-52 211.1 150 67.3
Ca_03675_v3 Cicer arietinum L. HOM05D006308 ORTHO05D007820 1.5e-52 210.7 181 59.7
Sc06g0001530 Simmondsia chinensis HOM05D006308 ORTHO05D007820 1.5e-52 210.7 154 63.0
COL.COLO4_07328 Corchorus olitorius HOM05D006308 ORTHO05D007820 2.5e-52 209.9 162 61.7
PSO017G0504 Papaver somniferum HOM05D006308 ORTHO05D007820 3.3e-52 209.5 195 51.8
CARHR087450 Cardamine hirsuta HOM05D006308 ORTHO05D007820 4.3e-52 209.1 170 58.8
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 4.3e-52 209.1 162 61.7
Pp3c9_2790 Physcomitrium patens HOM05D006308 ORTHO05D007820 4.3e-52 209.1 154 61.7
Potri.001G458600 Populus trichocarpa HOM05D006308 ORTHO05D007820 4.3e-52 209.1 150 64.7
Sed0016869 Sechium edule HOM05D006308 ORTHO05D007820 4.3e-52 209.1 174 60.9
Thhalv10021431m.g Eutrema salsugineum HOM05D006308 ORTHO05D007820 5.6e-52 208.8 170 58.8
Peaxi162Scf00452g00832 Petunia axillaris HOM05D006308 ORTHO05D007820 5.6e-52 208.8 157 63.7
QL08p064492 Quercus lobata HOM05D006308 ORTHO05D007820 7.3e-52 208.4 153 64.1
Mapoly0031s0088 Marchantia polymorpha HOM05D006308 ORTHO05D007820 9.6e-52 208.0 153 63.4
Sp3g11070 Schrenkiella parvula HOM05D006308 ORTHO05D007820 9.6e-52 208.0 170 58.2
SGA_v2.0_scaffold186G40217 Striga asiatica HOM05D006308 ORTHO05D007820 9.6e-52 208.0 181 58.0
Psat1g011160 Pisum sativum HOM05D006308 ORTHO05D007820 1.2e-51 207.6 176 58.5
Hma1.2p1_0334F.1_g128750 Hydrangea macrophylla HOM05D006308 ORTHO05D007820 1.6e-51 207.2 154 64.9
MSTRG.7060 Avicennia marina HOM05D006308 ORTHO05D007820 2.1e-51 206.8 163 63.2
CANSAT80G1356 Cannabis sativa HOM05D006308 ORTHO05D007820 2.8e-51 206.5 153 62.1
unitig_46.g18521 Utricularia gibba HOM05D006308 ORTHO05D007820 2.8e-51 206.5 159 64.2
MD10G1202500 Malus domestica HOM05D006308 ORTHO05D007820 4.7e-51 205.7 186 54.8
Sabra16G0310800 Salix brachista HOM05D006308 ORTHO05D007820 6.2e-51 205.3 150 64.0
Aa31LG8G150 Aethionema arabicum HOM05D006308 ORTHO05D007820 1.1e-50 204.5 156 60.9
Ah.16g106540 Amaranthus hybridus HOM05D006308 ORTHO05D007820 1.1e-50 204.5 154 61.7
AUR62043126 Chenopodium quinoa HOM05D006308 ORTHO05D007820 1.1e-50 204.5 154 62.3
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.1e-50 204.5 154 63.0
PGR083G0385 Punica granatum HOM05D006308 ORTHO05D007820 1.4e-50 204.1 145 67.6
CAN.G943.39 Capsicum annuum HOM05D006308 ORTHO05D007820 1.8e-50 203.8 152 63.8
Solyc07g066460.3 Solanum lycopersicum HOM05D006308 ORTHO05D007820 2.4e-50 203.4 154 62.3
Sopen07g034640 Solanum pennellii HOM05D006308 ORTHO05D007820 2.4e-50 203.4 154 62.3
PGSC0003DMG400022127 Solanum tuberosum HOM05D006308 ORTHO05D007820 2.4e-50 203.4 154 62.3
EL10Ac2g03321 Beta vulgaris HOM05D006308 ORTHO05D007820 3.1e-50 203.0 154 63.0
C01p52210 Brassica napus HOM05D006308 ORTHO05D007820 3.1e-50 203.0 170 57.1
BolC1t05161H Brassica oleracea HOM05D006308 ORTHO05D007820 3.1e-50 203.0 170 57.1
Lj1A905G40 Lonicera japonica HOM05D006308 ORTHO05D007820 3.1e-50 203.0 153 62.1
BcaC09g48280 Brassica carinata HOM05D006308 ORTHO05D007820 6.9e-50 201.8 170 56.5
A01p40570 Brassica napus HOM05D006308 ORTHO05D007820 1.2e-49 201.1 160 59.4
Migut.M01556 Erythranthe guttata HOM05D006308 ORTHO05D007820 1.5e-49 200.7 156 60.9
arahy.Tifrunner.gnm1.ann1.HXV25C Arachis hypogaea HOM05D006308 ORTHO05D007820 2.0e-49 200.3 195 53.8
HanXRQChr10g0305791 Helianthus annuus HOM05D006308 ORTHO05D007820 2.6e-49 199.9 153 61.4
TWI39G0290 Tripterygium wilfordii HOM05D006308 ORTHO05D007820 2.6e-49 199.9 162 59.3
BolC5t34167H Brassica oleracea HOM05D006308 ORTHO05D007820 3.4e-49 199.5 170 55.3
Prupe.4G139700 Prunus persica HOM05D006308 ORTHO05D007820 4.4e-49 199.1 180 55.6
A05p36560 Brassica napus HOM05D006308 ORTHO05D007820 9.9e-49 198.0 170 55.3
SalBow8G4544 Salvia bowleyana HOM05D006308 ORTHO05D007820 9.9e-49 198.0 160 60.6
BraA05t22456Z Brassica rapa HOM05D006308 ORTHO05D007820 1.3e-48 197.6 170 55.3
BraA01t04092Z Brassica rapa HOM05D006308 ORTHO05D007820 1.7e-48 197.2 160 58.8
Rhsim06G0239000 Rhododendron simsii HOM05D006308 ORTHO05D007820 2.9e-48 196.4 153 60.1
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 3.8e-48 196.1 157 61.1
vmacro11665 Vaccinium macrocarpon HOM05D006308 ORTHO05D007820 3.8e-48 196.1 143 65.0
ECA234G3728 Erigeron canadensis HOM05D006308 ORTHO05D007820 4.9e-48 195.7 153 60.8
Lsat_1_v5_gn_5_125241 Lactuca sativa HOM05D006308 ORTHO05D007820 2.4e-47 193.4 163 55.2
Os09g0493600 Oryza sativa ssp. japonica HOM05D006308 ORTHO05D007820 4.2e-47 192.6 149 63.8
Sabra11G0127800 Salix brachista HOM05D006308 ORTHO05D007820 7.1e-47 191.8 189 52.4
Hund12461 Selenicereus undatus HOM05D006308 ORTHO05D007820 1.2e-46 191.0 141 65.2
BcaC05g29223 Brassica carinata HOM05D006308 ORTHO05D007820 1.6e-46 190.7 143 60.8
Cc05_g16080 Coffea canephora HOM05D006308 ORTHO05D007820 2.1e-46 190.3 157 58.6
DCAR_016822 Daucus carota HOM05D006308 ORTHO05D007820 2.7e-46 189.9 150 59.3
C05p54980 Brassica napus HOM05D006308 ORTHO05D007820 2.3e-45 186.8 195 48.7
AagrBONN_evm.TU.Sc2ySwM_228.3592 Anthoceros agrestis HOM05D006308 ORTHO05D007820 1.9e-44 183.7 153 55.6
Haze_08539 Corylus avellana HOM05D006308 ORTHO05D007820 2.5e-44 183.3 196 50.0
Oeu051665.1 Olea europaea HOM05D006308 ORTHO05D007820 1.8e-42 177.2 190 51.1
BcaB06g25499 Brassica carinata HOM05D006308 ORTHO05D007820 6.9e-42 175.3 219 42.9
SMO367G0472 Selaginella moellendorffii HOM05D006308 ORTHO05D007820 8.4e-40 168.3 156 53.8
TAR381G0490 Trochodendron aralioides HOM05D006308 ORTHO05D007820 8.4e-40 168.3 126 63.5
VMungo1080G0665 Vigna mungo HOM05D006308 ORTHO05D007820 1.2e-38 164.5 156 55.1
Dinv42509 Davidia involucrata HOM05D006308 ORTHO05D007820 5.6e-36 155.6 143 55.2
Actinidia12793 Actinidia chinensis HOM05D006308 ORTHO05D007820 1.5e-33 147.5 152 47.4
Actinidia07352 Actinidia chinensis HOM05D006308 ORTHO05D007820 9.3e-31 138.3 81 74.1
Manes.06G172000 Manihot esculenta HOM05D006308 ORTHO05D007820 3.5e-30 136.3 139 49.6
Pp3c15_7010 Physcomitrium patens HOM05D006308 ORTHO05D007820 2.3e-29 133.7 191 39.8
Nn3g19990 Nelumbo nucifera HOM05D006308 ORTHO05D007820 2.5e-28 130.2 130 53.8
Nn3g19991 Nelumbo nucifera HOM05D006308 ORTHO05D007820 2.5e-28 130.2 130 53.8
Cre03.g205600 Chlamydomonas reinhardtii HOM05D006308 ORTHO05D007820 2.5e-20 103.6 181 34.8
MCO04G467 Micromonas commoda HOM05D006308 ORTHO05D007820 9.7e-20 101.7 111 42.3
Nn3g18400 Nelumbo nucifera HOM05D006308 ORTHO05D007820 9.7e-20 101.7 83 62.7
PRCOL_00002538 Prasinoderma coloniale HOM05D006308 ORTHO05D007820 1.6e-19 100.9 129 40.3
CAN.G337.145 Capsicum annuum HOM05D006308 ORTHO05D007820 2.0e-17 94.0 90 54.4
CBR_g48397 Chara braunii HOM05D006308 ORTHO05D007820 1.0e-13 81.6 90 47.8
A01p40580 Brassica napus HOM05D006308 ORTHO05D007820 2.5e-12 77.0 80 47.5
AUR62039167 Chenopodium quinoa HOM05D007854 ORTHO05D138328 6.5e-08 62.4 35 74.3
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 7.2e-07 58.9 117 29.1
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 7.2e-07 58.9 117 29.1
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 4.7e-06 56.2 130 28.5
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 7.9e-06 55.5 118 31.4


User provided reference genes

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