Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11936 Sequoiadendron giganteum HOM05D002653 ORTHO05D002623 0.0e+00 1107.0 537 100.0
ATR1155G033 Amborella trichopoda HOM05D002653 ORTHO05D002623 3.1e-120 436.4 456 47.4
MBI12_g09298_MAGBIO Magnolia biondii HOM05D002653 ORTHO05D002623 2.1e-116 423.7 502 44.0
PSO063G3289 Papaver somniferum HOM05D002653 ORTHO05D002623 3.6e-108 396.4 503 42.3
Dinv38369 Davidia involucrata HOM05D002653 ORTHO05D002623 4.0e-107 392.9 456 44.5
CSS0041142 Camellia sinensis var. sinensis HOM05D002653 ORTHO05D002623 6.8e-107 392.1 509 41.3
Rhsim13G0127300 Rhododendron simsii HOM05D002653 ORTHO05D002623 8.9e-107 391.7 455 44.6
Nn7g37406 Nelumbo nucifera HOM05D002653 ORTHO05D002623 3.4e-106 389.8 456 43.4
Mapoly0009s0011 Marchantia polymorpha HOM05D002653 ORTHO05D002623 3.7e-105 386.3 507 40.8
TAR624G1146 Trochodendron aralioides HOM05D002653 ORTHO05D002623 7.0e-104 382.1 503 41.7
Haze_24505 Corylus avellana HOM05D002653 ORTHO05D002623 9.2e-104 381.7 502 42.2
GSVIVG01019366001 Vitis vinifera HOM05D002653 ORTHO05D002623 9.2e-104 381.7 504 40.7
Cfa016258 Carpinus fangiana HOM05D002653 ORTHO05D002623 3.5e-103 379.8 502 42.0
QL04p064964 Quercus lobata HOM05D002653 ORTHO05D002623 4.3e-101 372.9 509 42.0
vmacro03486 Vaccinium macrocarpon HOM05D002653 ORTHO05D002623 1.2e-100 371.3 494 40.5
CiPaw.06G000600 Carya illinoinensis HOM05D002653 ORTHO05D002623 1.2e-98 364.8 502 40.2
Prupe.3G028500 Prunus persica HOM05D002653 ORTHO05D002623 2.6e-98 363.6 456 42.8
Atru.chr8.1038_Atru.chr8.1039 Acer truncatum HOM05D002653 ORTHO05D002623 3.4e-98 363.2 502 38.8
SMO353G0260 Selaginella moellendorffii HOM05D002653 ORTHO05D002623 9.8e-98 361.7 457 41.4
TWI34G1636 Tripterygium wilfordii HOM05D002653 ORTHO05D002623 1.7e-97 360.9 506 38.9
Pp3c15_25690 Physcomitrium patens HOM05D002653 ORTHO05D002623 2.2e-97 360.5 470 40.6
Potri.001G455600 Populus trichocarpa HOM05D002653 ORTHO05D002623 2.2e-97 360.5 502 39.2
Thecc.01G150000 Theobroma cacao HOM05D002653 ORTHO05D002623 5.4e-96 355.9 508 38.8
SalBow1G3632 Salvia bowleyana HOM05D002653 ORTHO05D002623 9.2e-96 355.1 463 41.3
Manes.11G165700 Manihot esculenta HOM05D002653 ORTHO05D002623 3.5e-95 353.2 511 38.7
Ciclev10010886m.g Citrus clementina HOM05D002653 ORTHO05D002623 4.6e-95 352.8 527 38.9
Cc11_g00280 Coffea canephora HOM05D002653 ORTHO05D002623 4.6e-95 352.8 502 39.8
Aqoxy2G01525 Aquilegia oxysepala HOM05D002653 ORTHO05D002623 6.0e-95 352.4 462 40.7
CANSAT01G2419 Cannabis sativa HOM05D002653 ORTHO05D002623 1.0e-94 351.7 502 39.0
Sopen11g020620 Solanum pennellii HOM05D002653 ORTHO05D002623 1.0e-94 351.7 502 38.6
SalBow1G2769 Salvia bowleyana HOM05D002653 ORTHO05D002623 1.7e-94 350.9 463 40.8
Psat0s3513g0080 Pisum sativum HOM05D002653 ORTHO05D002623 2.3e-94 350.5 457 41.1
Ca_14756_v3 Cicer arietinum L. HOM05D002653 ORTHO05D002623 5.0e-94 349.4 457 41.4
ECA233G1976 Erigeron canadensis HOM05D002653 ORTHO05D002623 8.6e-94 348.6 504 39.1
RcHm_v2.0_Chr2g0148311 Rosa chinensis HOM05D002653 ORTHO05D002623 1.1e-93 348.2 463 40.0
FvH4_6g36300 Fragaria vesca HOM05D002653 ORTHO05D002623 2.5e-93 347.1 465 41.3
FAN14G0870 Fragaria x ananassa HOM05D002653 ORTHO05D002623 2.5e-93 347.1 465 41.3
FAN14G5588 Fragaria x ananassa HOM05D002653 ORTHO05D002623 2.5e-93 347.1 465 41.3
TPR.G8155 Trifolium pratense HOM05D002653 ORTHO05D002623 2.5e-93 347.1 457 41.4
Manes.09G076300 Manihot esculenta HOM05D002653 ORTHO05D002623 3.3e-93 346.7 457 40.9
Zm00001eb260890 Zea mays HOM05D002653 ORTHO05D002623 3.3e-93 346.7 456 39.3
Lalb_Chr01g0009381 Lupinus albus HOM05D002653 ORTHO05D002623 5.6e-93 345.9 456 40.4
FAN02G0462 Fragaria x ananassa HOM05D002653 ORTHO05D002623 1.2e-92 344.7 465 40.6
Lj4C825G3 Lonicera japonica HOM05D002653 ORTHO05D002623 1.2e-92 344.7 459 40.7
CAN.G690.1 Capsicum annuum HOM05D002653 ORTHO05D002623 2.1e-92 344.0 502 37.5
Medtr2g007250 Medicago truncatula HOM05D002653 ORTHO05D002623 2.1e-92 344.0 457 41.1
LjContig00141g0016117 Lotus japonicus HOM05D002653 ORTHO05D002623 2.8e-92 343.6 503 39.2
HanXRQChr07g0186761 Helianthus annuus HOM05D002653 ORTHO05D002623 4.7e-92 342.8 513 38.4
Sabra16G0308200 Salix brachista HOM05D002653 ORTHO05D002623 4.7e-92 342.8 456 39.9
CsaV3_1G044330 Cucumis sativus L. HOM05D002653 ORTHO05D002623 8.1e-92 342.0 460 40.7
MD17G1156800 Malus domestica HOM05D002653 ORTHO05D002623 1.1e-91 341.7 512 37.9
FAN09G4442 Fragaria x ananassa HOM05D002653 ORTHO05D002623 1.8e-91 340.9 464 40.9
MSTRG.8096 Avicennia marina HOM05D002653 ORTHO05D002623 3.1e-91 340.1 459 39.7
Gorai.012G024100 Gossypium raimondii HOM05D002653 ORTHO05D002623 3.1e-91 340.1 456 40.6
Gohir.D04G020351 Gossypium hirsutum HOM05D002653 ORTHO05D002623 8.9e-91 338.6 456 40.4
Carub.0006s2259 Capsella rubella HOM05D002653 ORTHO05D002623 1.2e-90 338.2 460 40.2
Glyma.13G174600 Glycine max HOM05D002653 ORTHO05D002623 1.2e-90 338.2 505 37.6
Gohir.A05G394600 Gossypium hirsutum HOM05D002653 ORTHO05D002623 1.5e-90 337.8 456 39.7
Lj4g0020533 Lotus japonicus HOM05D002653 ORTHO05D002623 1.5e-90 337.8 511 38.2
Lsat_1_v5_gn_8_5081 Lactuca sativa HOM05D002653 ORTHO05D002623 2.6e-90 337.0 504 38.7
BolC7t44828H Brassica oleracea HOM05D002653 ORTHO05D002623 4.4e-90 336.3 459 39.4
Lsat_1_v5_gn_6_56501 Lactuca sativa HOM05D002653 ORTHO05D002623 5.8e-90 335.9 512 38.3
C07p42990 Brassica napus HOM05D002653 ORTHO05D002623 9.8e-90 335.1 457 39.4
AL6G36330 Arabidopsis lyrata HOM05D002653 ORTHO05D002623 2.2e-89 334.0 456 38.6
A06p35550 Brassica napus HOM05D002653 ORTHO05D002623 8.3e-89 332.0 459 39.0
BraA06t26480Z Brassica rapa HOM05D002653 ORTHO05D002623 8.3e-89 332.0 459 39.0
PGR044G0026 Punica granatum HOM05D002653 ORTHO05D002623 1.1e-88 331.6 460 40.2
SGA_v2.0_scaffold131G34416 Striga asiatica HOM05D002653 ORTHO05D002623 1.1e-88 331.6 458 40.0
ClCG03G010410 Citrullus lanatus HOM05D002653 ORTHO05D002623 3.2e-88 330.1 469 39.0
Thhalv10003500m.g Eutrema salsugineum HOM05D002653 ORTHO05D002623 4.1e-88 329.7 456 39.3
Aa31LG11G3960 Aethionema arabicum HOM05D002653 ORTHO05D002623 1.6e-87 327.8 466 36.5
Sp2g22690 Schrenkiella parvula HOM05D002653 ORTHO05D002623 6.0e-87 325.9 458 38.9
CARHR188760 Cardamine hirsuta HOM05D002653 ORTHO05D002623 7.8e-87 325.5 459 39.0
DCAR_018920 Daucus carota HOM05D002653 ORTHO05D002623 7.8e-87 325.5 456 38.6
THA.LOC104814962 Tarenaya hassleriana HOM05D002653 ORTHO05D002623 7.8e-87 325.5 458 40.0
arahy.Tifrunner.gnm1.ann1.GW217K Arachis hypogaea HOM05D002653 ORTHO05D002623 1.0e-86 325.1 504 37.3
Migut.L00525 Erythranthe guttata HOM05D002653 ORTHO05D002623 1.0e-86 325.1 457 39.2
arahy.Tifrunner.gnm1.ann1.21MRAZ Arachis hypogaea HOM05D002653 ORTHO05D002623 1.3e-86 324.7 504 37.1
EL10Ac1g01415 Beta vulgaris HOM05D002653 ORTHO05D002623 1.7e-86 324.3 539 36.4
Migut.L00786 Erythranthe guttata HOM05D002653 ORTHO05D002623 3.9e-86 323.2 457 38.9
Cpa.g.sc119.2 Carica papaya HOM05D002653 ORTHO05D002623 1.1e-85 321.6 514 35.4
AUR62013467 Chenopodium quinoa HOM05D002653 ORTHO05D002623 1.2e-84 318.2 558 34.4
Sc15g0007450 Simmondsia chinensis HOM05D002653 ORTHO05D002623 6.2e-84 315.8 517 35.6
Phvul.002G328600 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 1.8e-83 314.3 510 35.3
Duzib114G0204 Durio zibethinus HOM05D002653 ORTHO05D002623 8.9e-83 312.0 502 37.3
Eucgr.K01355 Eucalyptus grandis HOM05D002653 ORTHO05D002623 2.9e-81 307.0 477 38.4
VMungo0251G2737 Vigna mungo HOM05D002653 ORTHO05D002623 1.4e-80 304.7 453 37.1
unitig_8.g3108 Utricularia gibba HOM05D002653 ORTHO05D002623 2.1e-79 300.8 458 38.2
BcaNung01253 Brassica carinata HOM05D002653 ORTHO05D002623 1.2e-74 285.0 456 35.7
Sed0003631 Sechium edule HOM05D002653 ORTHO05D002623 1.2e-74 285.0 419 39.4
AT5G24740 Arabidopsis thaliana HOM05D002653 ORTHO05D002623 1.1e-67 261.9 419 35.6
Peaxi162Scf00126g00524 Petunia axillaris HOM05D002653 ORTHO05D002623 2.4e-56 224.2 376 34.0
Phvul.002G328704 Phaseolus vulgaris HOM05D002653 ORTHO05D002623 2.4e-56 224.2 398 33.7
AUR62007656 Chenopodium quinoa HOM05D002653 ORTHO05D002623 3.2e-56 223.8 366 35.2
Hma1.2p1_2738F.1_g327710 Hydrangea macrophylla HOM05D002653 ORTHO05D002623 8.7e-46 189.1 436 31.0
CBR_g47051 Chara braunii HOM05D002653 ORTHO05D002623 5.9e-42 176.4 455 27.9
MD09G1170300 Malus domestica HOM05D002653 ORTHO05D002623 8.7e-38 162.5 323 33.1
Gorai.012G024500 Gossypium raimondii HOM05D002653 ORTHO05D002623 2.6e-29 134.4 140 46.4
HPP92_001355 Vanilla planifolia HOM05D002653 ORTHO05D002623 2.6e-29 134.4 188 36.7
Nitab4.5_0006025g0010 Nicotiana tabacum HOM05D002653 ORTHO05D002623 6.5e-25 119.8 164 40.9
SalBow2G0206 Salvia bowleyana HOM05D007496 ORTHO05D009479 1.4e-19 102.1 275 27.3
CSS0047039 Camellia sinensis var. sinensis HOM05D002653 ORTHO05D002623 1.2e-18 99.0 89 51.7
SMO302G0008 Selaginella moellendorffii HOM05D002653 ORTHO05D002623 9.4e-16 89.4 74 54.1
MELO3C010025.2 Cucumis melo HOM05D002653 ORTHO05D002623 4.1e-11 73.9 52 55.8
CBR_g47049 Chara braunii HOM05D002653 ORTHO05D002623 5.3e-11 73.6 45 60.0
BraA08t33273Z Brassica rapa HOM05D001092 ORTHO05D000923 1.0e-09 69.3 189 25.9
BolC8t48437H Brassica oleracea HOM05D001092 ORTHO05D000923 1.3e-09 68.9 189 25.9
A08p12890 Brassica napus HOM05D001092 ORTHO05D000923 5.0e-09 67.0 189 25.4
Carub.0007s2427 Capsella rubella HOM05D001092 ORTHO05D000923 6.5e-09 66.6 189 24.9
CARHR223710 Cardamine hirsuta HOM05D001092 ORTHO05D000923 1.1e-08 65.9 189 26.5
TWI73G1237 Tripterygium wilfordii HOM05D001092 ORTHO05D000923 2.5e-08 64.7 197 24.4
AagrBONN_evm.TU.Sc2ySwM_362.1818 Anthoceros agrestis HOM05D001092 ORTHO05D000923 7.2e-08 63.2 198 24.2
AL7G37590 Arabidopsis lyrata HOM05D001092 ORTHO05D000923 9.4e-08 62.8 186 24.2
Lsat_1_v5_gn_1_40321 Lactuca sativa HOM05D001092 ORTHO05D000923 1.6e-07 62.0 181 24.9
SMO353G0198 Selaginella moellendorffii HOM05D002653 ORTHO05D002623 3.6e-07 60.8 38 63.2
CDE02G0350 Ceratophyllum demersum HOM05D001092 ORTHO05D000923 4.7e-07 60.5 200 22.5
HPP92_001361 Vanilla planifolia HOM05D002653 ORTHO05D002623 4.7e-07 60.5 51 51.0
Thhalv10024176m.g Eutrema salsugineum HOM05D001092 ORTHO05D000923 6.1e-07 60.1 184 25.0
AT4G17140 Arabidopsis thaliana HOM05D001092 ORTHO05D000923 8.0e-07 59.7 187 23.5
SMO240G0011 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 2.3e-06 58.2 204 29.4
SMO340G0042 Selaginella moellendorffii HOM05D001092 ORTHO05D000923 2.3e-06 58.2 204 29.4


User provided reference genes

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