Gene: AT4G17140

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G17140
  • Transcript Identifier AT4G17140.2
  • Gene Type Coding gene
  • Location Chr4 : 9613617-9636618 : negative

Gene Family Information

  • ID HOM05D001092
  • #Genes/#Species 562/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G17140.2
  • uniprot F4JNE2

Descriptions

  • Description pleckstrin homology (PH) domain-containing protein
  • Computational description pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1); Has 2762 Blast hits to 1565 proteins in 213 species: Archae - 0; Bacteria - 36; Metazoa - 1081; Fungi - 437; Plants - 621; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink).
  • Computational description pleckstrin homology (PH) domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF946 (InterPro:IPR009291), Pleckstrin homology (InterPro:IPR001849); BEST Arabidopsis thaliana protein match is: calcium-dependent lipid-binding family protein (TAIR:AT1G48090.1); Has 2762 Blast hits to 1565 proteins in 213 species: Archae - 0; Bacteria - 36; Metazoa - 1081; Fungi - 437; Plants - 621; Viruses - 0; Other Eukaryotes - 587 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006623
IBA
Gene Ontologyprotein targeting to vacuole1
GO:0045053
IBA
Gene Ontologyprotein retention in Golgi apparatus1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISM
Gene Ontologyplasma membrane
GO:0000325
HDA
Gene Ontologyplant-type vacuole2
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma3
GO:0005794
IDA
GOA DatabaseGolgi apparatus
GO:0005794
HDA
Gene OntologyGolgi apparatus4
GO:0005829
HDA
Gene Ontologycytosol5
GO:0019898
IBA
Gene Ontologyextrinsic component of membrane1
GO:0005773
IDA
GOA Databasevacuole

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR031646 Vacuolar protein sorting-associated protein 13, second N-terminal domain
IPR001849 Pleckstrin homology domain
IPR031642 VPS13, repeated coiled region
IPR009291 Vacuolar protein sorting-associated protein 62
IPR026854 Vacuolar protein sorting-associated protein 13-like, N-terminal domain
Mapman id Description
35.1 not assigned.annotated