Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11841 Sequoiadendron giganteum HOM05D001719 ORTHO05D384441 8.5e-42 173.3 92 100.0
Nn5g30572 Nelumbo nucifera HOM05D001719 ORTHO05D008373 1.2e-14 83.2 83 51.8
CSS0031263 Camellia sinensis var. sinensis HOM05D001719 ORTHO05D008373 4.4e-14 81.3 83 51.8
DCAR_001697 Daucus carota HOM05D001719 ORTHO05D008373 5.7e-14 80.9 83 49.4
Dinv15804 Davidia involucrata HOM05D001719 ORTHO05D008373 5.7e-14 80.9 81 54.3
TAR376G0701 Trochodendron aralioides HOM05D001719 ORTHO05D008373 1.7e-13 79.3 81 50.6
ATR1153G087 Amborella trichopoda HOM05D001719 ORTHO05D008373 2.2e-13 79.0 86 46.5
Lsat_1_v5_gn_7_85141 Lactuca sativa HOM05D001719 ORTHO05D008373 3.7e-13 78.2 86 50.0
Actinidia34362 Actinidia chinensis HOM05D001719 ORTHO05D008373 6.3e-13 77.4 83 50.6
vmacro01964 Vaccinium macrocarpon HOM05D001719 ORTHO05D008373 8.3e-13 77.0 83 49.4
Aqoxy5G00876 Aquilegia oxysepala HOM05D001719 ORTHO05D008373 1.8e-12 75.9 81 50.6
Potri.001G294900 Populus trichocarpa HOM05D001719 ORTHO05D008373 2.4e-12 75.5 83 45.8
Sabra16G0184000 Salix brachista HOM05D001719 ORTHO05D008373 2.4e-12 75.5 83 47.0
Ciclev10028673m.g Citrus clementina HOM05D001719 ORTHO05D008373 4.1e-12 74.7 81 50.6
TWI14G0581 Tripterygium wilfordii HOM05D001719 ORTHO05D008373 5.4e-12 74.3 83 47.0
Gohir.A03G182600 Gossypium hirsutum HOM05D001719 ORTHO05D008373 7.0e-12 73.9 81 50.6
Nitab4.5_0001105g0040 Nicotiana tabacum HOM05D001719 ORTHO05D008373 7.0e-12 73.9 83 43.4
PSO017G6860 Papaver somniferum HOM05D001719 ORTHO05D008373 7.0e-12 73.9 83 44.6
Atru.chr5.2358 Acer truncatum HOM05D001719 ORTHO05D008373 1.2e-11 73.2 83 45.8
CANSAT25G2505 Cannabis sativa HOM05D001719 ORTHO05D008373 1.6e-11 72.8 82 50.0
ECA236G5137 Erigeron canadensis HOM05D001719 ORTHO05D008373 2.0e-11 72.4 86 43.0
PGSC0003DMG400025840 Solanum tuberosum HOM05D001719 ORTHO05D008373 2.0e-11 72.4 83 44.6
CAN.G606.57 Capsicum annuum HOM05D001719 ORTHO05D008373 2.7e-11 72.0 83 44.6
Cpa.g.sc106.52 Carica papaya HOM05D001719 ORTHO05D008373 2.7e-11 72.0 81 50.6
Gohir.D02G204200 Gossypium hirsutum HOM05D001719 ORTHO05D008373 2.7e-11 72.0 81 49.4
Gorai.005G231500 Gossypium raimondii HOM05D001719 ORTHO05D008373 2.7e-11 72.0 81 49.4
Nitab4.5_0008075g0010 Nicotiana tabacum HOM05D001719 ORTHO05D008373 2.7e-11 72.0 83 43.4
HanXRQChr16g0509301 Helianthus annuus HOM05D001719 ORTHO05D008373 3.5e-11 71.6 86 46.5
Solyc01g107040.3 Solanum lycopersicum HOM05D001719 ORTHO05D008373 3.5e-11 71.6 83 44.6
Sopen01g049310 Solanum pennellii HOM05D001719 ORTHO05D008373 3.5e-11 71.6 83 44.6
Cc02_g19830 Coffea canephora HOM05D001719 ORTHO05D008373 4.5e-11 71.2 81 45.7
Migut.B00447 Erythranthe guttata HOM05D001719 ORTHO05D008373 5.9e-11 70.9 82 43.9
SalBow6G1197 Salvia bowleyana HOM05D001719 ORTHO05D008373 1.3e-10 69.7 81 45.7
unitig_0.g884 Utricularia gibba HOM05D001719 ORTHO05D008373 1.3e-10 69.7 86 41.9
COL.COLO4_32517 Corchorus olitorius HOM05D001719 ORTHO05D008373 1.7e-10 69.3 81 46.9
Thecc.02G116700 Theobroma cacao HOM05D001719 ORTHO05D008373 1.7e-10 69.3 86 45.3
HPP92_009540 Vanilla planifolia HOM05D001719 ORTHO05D008373 1.7e-10 69.3 84 45.2
GSVIVG01037840001 Vitis vinifera HOM05D001719 ORTHO05D008373 2.3e-10 68.9 86 40.7
Eucgr.I01063 Eucalyptus grandis HOM05D001719 ORTHO05D008373 3.8e-10 68.2 81 45.7
Ah.14g085660 Amaranthus hybridus HOM05D001719 ORTHO05D008373 5.0e-10 67.8 81 43.2
Hma1.2p1_1059F.1_g252950 Hydrangea macrophylla HOM05D001719 ORTHO05D008373 5.0e-10 67.8 82 47.6
Pp3c13_1500 Physcomitrium patens HOM05D001719 ORTHO05D008373 5.0e-10 67.8 86 43.0
AT3G19630 Arabidopsis thaliana HOM05D001719 ORTHO05D008373 6.6e-10 67.4 83 43.4
MSTRG.20220 Avicennia marina HOM05D001719 ORTHO05D008373 6.6e-10 67.4 81 42.0
Duzib132G0579 Durio zibethinus HOM05D001719 ORTHO05D008373 6.6e-10 67.4 81 46.9
Thhalv10020962m.g Eutrema salsugineum HOM05D001719 ORTHO05D008373 8.6e-10 67.0 83 42.2
SMO266G0039 Selaginella moellendorffii HOM05D001719 ORTHO05D008373 1.1e-09 66.6 88 39.8
CARHR095090 Cardamine hirsuta HOM05D001719 ORTHO05D008373 1.5e-09 66.2 83 43.4
CiPaw.05G017600 Carya illinoinensis HOM05D001719 ORTHO05D008373 1.5e-09 66.2 86 41.9
Manes.10G081800 Manihot esculenta HOM05D001719 ORTHO05D008373 1.5e-09 66.2 81 42.0
BolC3t17340H Brassica oleracea HOM05D001719 ORTHO05D008373 1.9e-09 65.9 83 43.4
Lj9A327T33 Lonicera japonica HOM05D001719 ORTHO05D008373 2.5e-09 65.5 81 43.2
PGR031G2413 Punica granatum HOM05D001719 ORTHO05D008373 2.5e-09 65.5 83 41.0
Sp3g17670 Schrenkiella parvula HOM05D001719 ORTHO05D008373 2.5e-09 65.5 83 42.2
AL3G33070 Arabidopsis lyrata HOM05D001719 ORTHO05D008373 3.3e-09 65.1 83 42.2
BcaB04g19055 Brassica carinata HOM05D001719 ORTHO05D008373 3.3e-09 65.1 83 43.4
BcaC01g03613 Brassica carinata HOM05D001719 ORTHO05D008373 3.3e-09 65.1 83 43.4
BraA03t13288Z Brassica rapa HOM05D001719 ORTHO05D008373 3.3e-09 65.1 83 43.4
FAN24G2126 Fragaria x ananassa HOM05D001719 ORTHO05D008373 3.3e-09 65.1 81 40.7
Sed0011640 Sechium edule HOM05D001719 ORTHO05D008373 3.3e-09 65.1 92 45.7
Carub.0003s1950 Capsella rubella HOM05D001719 ORTHO05D008373 4.3e-09 64.7 81 43.2
Oeu037281.1 Olea europaea HOM05D001719 ORTHO05D008373 4.3e-09 64.7 81 40.7
C03p50500 Brassica napus HOM05D001719 ORTHO05D008373 5.6e-09 64.3 83 43.4
A03p41340 Brassica napus HOM05D001719 ORTHO05D008373 7.3e-09 63.9 83 42.2
FvH4_2g04300 Fragaria vesca HOM05D001719 ORTHO05D008373 7.3e-09 63.9 81 39.5
Rhsim11G0153000 Rhododendron simsii HOM05D001719 ORTHO05D008373 9.5e-09 63.5 92 40.2
Hund12567 Selenicereus undatus HOM05D001719 ORTHO05D008373 9.5e-09 63.5 81 39.5
FAN15G0793 Fragaria x ananassa HOM05D001719 ORTHO05D008373 1.2e-08 63.2 81 39.5
Os03g0202300 Oryza sativa ssp. japonica HOM05D001719 ORTHO05D008373 1.2e-08 63.2 87 44.8
RcHm_v2.0_Chr6g0253741 Rosa chinensis HOM05D001719 ORTHO05D008373 1.2e-08 63.2 81 39.5
Sc12g0006760 Simmondsia chinensis HOM05D001719 ORTHO05D008373 1.2e-08 63.2 81 43.2
SGA_v2.0_scaffold32G12995 Striga asiatica HOM05D001719 ORTHO05D008373 1.6e-08 62.8 81 40.7
FAN27G0426 Fragaria x ananassa HOM05D001719 ORTHO05D008373 2.1e-08 62.4 81 39.5
Mapoly0003s0260 Marchantia polymorpha HOM05D001719 ORTHO05D008373 2.1e-08 62.4 86 41.9
AUR62032992 Chenopodium quinoa HOM05D001719 ORTHO05D008373 2.8e-08 62.0 83 41.0
Cfa004629 Carpinus fangiana HOM05D001719 ORTHO05D008373 3.6e-08 61.6 89 40.4
CsaV3_7G007820 Cucumis sativus L. HOM05D001719 ORTHO05D008373 3.6e-08 61.6 92 43.5
Glyma.11G001700 Glycine max HOM05D001719 ORTHO05D008373 4.7e-08 61.2 94 39.4
MELO3C018520.2 Cucumis melo HOM05D001719 ORTHO05D008373 6.1e-08 60.8 92 43.5
MD10G1105300 Malus domestica HOM05D001719 ORTHO05D008373 6.1e-08 60.8 81 38.3
Aa31LG8G6410 Aethionema arabicum HOM05D001719 ORTHO05D008373 8.0e-08 60.5 83 38.6
Haze_10224 Corylus avellana HOM05D001719 ORTHO05D008373 8.0e-08 60.5 89 39.3
ClCG02G006820 Citrullus lanatus HOM05D001719 ORTHO05D008373 2.3e-07 58.9 92 42.4
QL11p030649 Quercus lobata HOM05D001719 ORTHO05D008373 2.3e-07 58.9 101 34.7
THA.LOC104825385 Tarenaya hassleriana HOM05D001719 ORTHO05D008373 2.3e-07 58.9 83 39.8
EL10Ac8g19389 Beta vulgaris HOM05D001719 ORTHO05D008373 5.2e-07 57.8 81 38.3
Rhsim11G0151200 Rhododendron simsii HOM05D001719 ORTHO05D008373 8.9e-07 57.0 84 36.9
Psat4g227560 Pisum sativum HOM05D001719 ORTHO05D008373 2.0e-06 55.8 95 38.9
Lalb_Chr09g0319611 Lupinus albus HOM05D001719 ORTHO05D008373 3.4e-06 55.1 91 38.5
AUR62034082 Chenopodium quinoa HOM05D001719 ORTHO05D008373 4.4e-06 54.7 72 38.9
Phvul.002G051800 Phaseolus vulgaris HOM05D001719 ORTHO05D008373 4.4e-06 54.7 93 38.7
Medtr5g005050 Medicago truncatula HOM05D001719 ORTHO05D008373 5.7e-06 54.3 92 37.0
TPR.G10779 Trifolium pratense HOM05D001719 ORTHO05D008373 7.5e-06 53.9 96 36.5
VMungo1215G0697 Vigna mungo HOM05D001719 ORTHO05D008373 7.5e-06 53.9 92 38.0


User provided reference genes

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