Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_11837 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 9.4e-245 849.7 425 100.0
ATR0730G152 Amborella trichopoda HOM05D001734 ORTHO05D003483 3.0e-110 402.9 342 60.8
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 1.2e-106 391.0 342 59.6
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 5.2e-102 375.6 342 58.2
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 7.5e-101 371.7 342 57.6
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 7.5e-101 371.7 342 57.3
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 2.9e-100 369.8 343 56.9
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 4.9e-100 369.0 347 57.3
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 1.4e-99 367.5 342 56.7
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 2.4e-99 366.7 343 56.6
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 1.2e-98 364.4 341 56.3
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 1.6e-98 364.0 342 55.8
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 2.0e-98 363.6 342 56.4
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 2.0e-98 363.6 343 56.3
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 2.7e-98 363.2 341 56.6
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 2.3e-97 360.1 342 56.4
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 6.6e-97 358.6 342 55.3
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 1.1e-96 357.8 342 56.4
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 1.1e-96 357.8 342 56.1
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 4.3e-96 355.9 351 55.3
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 4.3e-96 355.9 341 55.7
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 7.3e-96 355.1 343 54.2
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 9.5e-96 354.8 345 56.2
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 9.5e-96 354.8 342 55.0
CSS0038273 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D003483 1.2e-95 354.4 345 56.2
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 1.2e-95 354.4 342 54.4
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 3.6e-95 352.8 342 55.3
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 4.7e-95 352.4 342 56.7
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 8.0e-95 351.7 342 55.8
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 8.0e-95 351.7 342 55.8
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 1.1e-94 351.3 342 54.7
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 3.1e-94 349.7 342 55.3
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 4.0e-94 349.4 342 56.1
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 5.2e-94 349.0 342 54.4
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 6.8e-94 348.6 342 54.7
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 6.8e-94 348.6 342 53.8
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 8.9e-94 348.2 342 54.4
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 1.2e-93 347.8 341 56.9
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 1.5e-93 347.4 341 54.0
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 1.5e-93 347.4 341 54.5
BcaNung07276 Brassica carinata HOM05D001734 ORTHO05D003483 2.0e-93 347.1 370 50.3
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 2.0e-93 347.1 342 55.6
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 2.0e-93 347.1 342 55.0
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 2.6e-93 346.7 343 55.7
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 2.6e-93 346.7 342 55.8
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 2.6e-93 346.7 344 54.1
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 3.4e-93 346.3 342 53.5
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 7.5e-93 345.1 368 51.4
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 1.3e-92 344.4 370 50.0
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 1.3e-92 344.4 342 54.1
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 1.7e-92 344.0 370 50.3
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 1.7e-92 344.0 342 55.0
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 2.9e-92 343.2 370 49.7
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 2.9e-92 343.2 342 52.6
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 4.9e-92 342.4 342 55.3
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 4.9e-92 342.4 342 54.1
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 4.9e-92 342.4 341 54.5
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 3.2e-91 339.7 378 49.2
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 9.2e-91 338.2 384 48.4
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 1.6e-90 337.4 342 55.6
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 4.6e-90 335.9 343 53.6
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 6.0e-90 335.5 351 51.3
BraA06t25687Z Brassica rapa HOM05D001734 ORTHO05D003483 6.0e-90 335.5 351 51.3
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 2.3e-89 333.6 342 55.0
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.5e-88 330.1 342 52.3
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 3.3e-88 329.7 342 51.5
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 1.1e-86 324.7 342 51.2
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.4e-86 324.3 344 52.0
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 1.4e-86 324.3 342 50.9
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 4.0e-86 322.8 342 50.9
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 6.8e-86 322.0 342 54.4
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 8.9e-86 321.6 342 52.6
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 5.8e-85 318.9 342 52.3
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 9.9e-85 318.2 342 49.4
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 1.4e-83 314.3 320 52.8
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 2.7e-82 310.1 362 44.5
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.5e-82 309.7 342 50.3
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 6.0e-82 308.9 343 49.0
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 7.8e-82 308.5 381 48.6
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 3.9e-81 306.2 368 46.7
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 2.5e-80 303.5 365 46.8
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 1.2e-79 301.2 413 43.1
TPR.G6034 Trifolium pratense HOM05D001734 ORTHO05D003483 4.4e-77 292.7 347 49.3
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 7.6e-77 292.0 437 41.4
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 4.9e-76 289.3 397 41.8
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 2.3e-73 280.4 384 45.6
VMungo1309G0494 Vigna mungo HOM05D001734 ORTHO05D003483 7.3e-72 275.4 298 51.3
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 6.2e-71 272.3 256 58.2
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.8e-70 270.8 344 47.7
FAN20G1266 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.2e-66 258.1 338 45.3
Cpa.g.sc76.54 Carica papaya HOM05D001734 ORTHO05D003483 3.0e-65 253.4 342 44.7
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 1.3e-55 221.5 343 42.3
CBR_g292 Chara braunii HOM05D001734 ORTHO05D003483 1.6e-55 221.1 373 38.9
SHI16990 Sapria himalayana HOM05D001734 ORTHO05D003483 7.6e-53 212.2 250 50.0
CARHR156930 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.6e-50 204.5 196 53.1
unitig_0.g1442 Utricularia gibba HOM05D001734 ORTHO05D003483 2.8e-47 193.7 165 60.6
Lj9A448G35 Lonicera japonica HOM05D001734 ORTHO05D003483 2.2e-39 167.5 140 62.1
MBI10_g06738_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D003483 1.3e-36 158.3 121 66.9
Rhsim02G0102400 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.6e-34 151.4 209 47.8
Rhsim08G0157900 Rhododendron simsii HOM05D001734 ORTHO05D003483 6.1e-34 149.4 395 33.2
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.8e-33 147.9 171 47.4
PSO675G3963 Papaver somniferum HOM05D001734 ORTHO05D003483 9.1e-30 135.6 121 59.5
SMO298G0036 Selaginella moellendorffii HOM05D001734 ORTHO05D003483 8.5e-28 129.0 160 45.6
Medtr3g110870 Medicago truncatula HOM05D001734 ORTHO05D003483 9.4e-27 125.6 108 62.0
MBI10_g06737_MAGBIO Magnolia biondii HOM05D001734 ORTHO05D003483 5.1e-25 119.8 99 56.6
Lsat_1_v5_gn_9_85140 Lactuca sativa HOM05D001734 ORTHO05D003483 3.6e-18 97.1 95 51.6
Medtr7g026890 Medicago truncatula HOM05D001734 ORTHO05D003483 2.3e-17 94.4 108 51.9
PSO017G2470 Papaver somniferum HOM05D001734 ORTHO05D003483 2.0e-16 91.3 160 38.1
Medtr4g071250 Medicago truncatula HOM05D001734 ORTHO05D003483 4.8e-15 86.7 73 63.0
MD14G1180200 Malus domestica HOM05D001734 ORTHO05D003483 6.3e-15 86.3 125 44.0
QL07p004594 Quercus lobata HOM05D001734 ORTHO05D020518 1.2e-10 72.0 63 55.6
Hma1.2p1_1064F.1_g253630 Hydrangea macrophylla HOM05D001218 ORTHO05D029952 1.0e-09 68.9 62 56.5
Lsat_1_v5_gn_2_130860 Lactuca sativa HOM05D004109 ORTHO05D019780 2.0e-08 64.7 57 52.6
HanXRQChr02g0035091 Helianthus annuus HOM05D001734 ORTHO05D003483 1.4e-06 58.5 51 54.9


User provided reference genes

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